CLASP1

General Information

Gene Name       : CLASP1
Gene ID             : ENSG00000074054.18
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CLASP1)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CLASP1ENSG00000074054.1818.1321.2919.71ENCSR000AEF
HepG2CLASP1ENSG00000074054.1821.2122.7021.95ENCSR985KAT
K562CLASP1ENSG00000074054.1812.5212.0812.30ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CLASP1 is not avaliable on ENCORE database.



Proteins bound to RNA

  • CLASP1 RNA is bound by 52 proteins.  







eCLIP assay for CLASP1 is not avaliable on ENCORE database.





52 proteins are bound to CLASP1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2122104717122104727-3'-UTR,CDS,intron-Distal3.372824.85828HepG2BCLAF1
chr2122145318122145340-3'-UTR,CDS,intron-Distal,intron-Proximal3.473853.52230K562AQR
chr2122135084122135145-3'-UTR,CDS,intron-Distal3.9573615.54811HepG2BCLAF1
chr2122104634122104672-3'-UTR,CDS,intron-Distal3.865157.65975HepG2BCLAF1
chr2122125352122125450-3'-UTR,CDS,intron-Distal,intron-Proximal3.131278.60267HepG2BUD13
chr2122106088122106118-3'-UTR,CDS,intron-Distal4.057414.23295HepG2GRWD1
chr2122135074122135143-3'-UTR,CDS,intron-Distal,intron-Proximal5.733217.72885K562DDX24
chr2122096595122096720-3'-UTR,intron-Distal4.4637430.88313K562UPF1
chr2122155899122155931-3'-UTR,CDS,intron-Distal3.740018.66838HepG2BCLAF1
chr2122154802122154841-3'-UTR,CDS,intron-Distal3.711728.25092HepG2BCLAF1
chr2122122677122122743-3'-UTR,CDS,intron-Distal4.284423.88780HepG2G3BP1
chr2122096899122096976-3'-UTR,intron-Distal4.349513.18535HepG2LSM11
chr2122135074122135084-3'-UTR,CDS,intron-Distal,intron-Proximal4.6449810.13662HepG2BCLAF1
chr2122125338122125425-3'-UTR,CDS,intron-Distal,intron-Proximal4.438587.13970HepG2PRPF8
chr2122125368122125408-3'-UTR,CDS,intron-Distal,intron-Proximal3.1694112.88686HepG2BCLAF1
chr2122096132122096252-3'-UTR,intron-Distal3.641405.40760HepG2UPF1
chr2122096608122096718-3'-UTR,intron-Distal4.9893535.89507K562EIF4G2
chr2122095467122095521-3'-UTR,intron-Distal3.796624.24288K562UPF1
chr2122135091122135116-3'-UTR,CDS,intron-Distal3.059993.90804HepG2GRWD1
chr2122096640122096717-3'-UTR,intron-Distal3.134205.29197HepG2UPF1
chr2122096355122096396-3'-UTR,intron-Distal4.802664.56348K562UPF1
chr2122097958122098040-3'-UTR,intron-Distal4.321333.83202K562DDX6
chr2122095665122095730-3'-UTR,intron-Distal3.106093.02335HepG2LSM11
chr2122155951122155993-3'-UTR,CDS,intron-Distal,intron-Proximal3.566615.76944HepG2U2AF2
chr2122097963122098017-3'-UTR,intron-Distal3.429157.19915K562UPF1
chr2122125370122125409-3'-UTR,CDS,intron-Distal,intron-Proximal3.173243.54210HepG2EIF3H
chr2122135116122135153-3'-UTR,CDS,intron-Distal3.259656.02862HepG2GRWD1
chr2122125372122125391-3'-UTR,CDS,intron-Distal3.704418.43905HepG2PPIG
chr2122095648122095737-3'-UTR,intron-Distal3.016414.06631HepG2ZC3H11A
chr2122125192122125235-3'-UTR,CDS,intron-Distal3.460614.25541HepG2GRWD1
chr2122154841122154858-3'-UTR,CDS,intron-Distal3.372826.60490HepG2BCLAF1
chr2122106036122106113-3'-UTR,CDS,intron-Distal,intron-Proximal3.396977.35853HepG2PRPF8
chr2122096641122096727-3'-UTR,intron-Distal5.6378639.11672K562TARDBP
chr2122154725122154802-3'-UTR,CDS,intron-Distal4.8435222.68439HepG2BCLAF1
chr2122125391122125408-3'-UTR,CDS,intron-Distal,intron-Proximal3.541759.97237HepG2PPIG
chr2122145358122145413-3'-UTR,CDS,intron-Distal3.874363.86978K562YBX3
chr2122122668122122762-3'-UTR,CDS,intron-Distal,intron-Proximal4.4792610.51512HepG2GRWD1
chr2122159086122159145-3'-UTR,CDS,intron-Distal3.1577510.21526HepG2BCLAF1
chr2122135076122135131-3'-UTR,CDS,intron-Distal3.617144.74755K562ZNF622
chr2122096647122096741-3'-UTR,intron-Distal3.800223.96838HepG2TIAL1
chr2122096722122096771-3'-UTR,intron-Distal4.095474.33846HepG2IGF2BP1
chr2122135079122135177-3'-UTR,CDS,intron-Distal3.941893.48077HepG2UCHL5
chr2122096915122096960-3'-UTR,intron-Distal3.074824.34904K562UPF1
chr2122135076122135091-3'-UTR,CDS,intron-Distal3.124043.40321HepG2GRWD1
chr2122260740122260789-5'-UTR,CDS,intron-Distal,intron-Proximal5.2461216.89254HepG2BCLAF1
chr2122260803122260810-5'-UTR,CDS,intron-Distal,intron-Proximal4.457787.97334HepG2BCLAF1
chr2122406938122406997-5'-UTR,intron-Distal3.451946.37302HepG2NCBP2
chr2122406951122406985-5'-UTR,intron-Distal3.647927.83567HepG2BCLAF1
chr2122165251122165301-CDS,intron-Distal,intron-Proximal3.436843.99908K562BUD13
chr2122283478122283492-CDS,intron-Distal3.337624.61799HepG2BCLAF1
chr2122215307122215378-CDS,intron-Distal,intron-Proximal4.472874.69223K562SF3B4
chr2122209365122209398-CDS,intron-Distal,intron-Proximal3.537898.47761HepG2BCLAF1
chr2122204856122204921-CDS,intron-Distal,intron-Proximal3.220535.62208HepG2PRPF8
chr2122168429122168543-CDS,intron-Distal,intron-Proximal3.8798910.14528HepG2PPIG
chr2122205850122205862-CDS,intron-Distal,intron-Proximal3.480303.85127HepG2GRWD1
chr2122202480122202596-CDS,intron-Distal,intron-Proximal5.2680116.08256HepG2QKI
chr2122216492122216522-CDS,intron-Distal3.741307.23562HepG2BCLAF1
chr2122165134122165196-CDS,intron-Distal3.229924.44630K562ZNF622
chr2122208557122208566-CDS,intron-Distal3.391896.74947HepG2BCLAF1
chr2122287765122287871-CDS,intron-Distal,intron-Proximal3.981516.95612HepG2PRPF8
chr2122165221122165292-CDS,intron-Distal,intron-Proximal3.900216.26935K562DDX24
chr2122161969122162008-CDS,intron-Distal3.483403.95301K562ZNF622
chr2122227389122227466-CDS,intron-Distal3.562956.44869K562UCHL5
chr2122205862122205901-CDS,intron-Distal5.050737.01471HepG2GRWD1
chr2122165258122165287-CDS,intron-Distal3.100665.69345HepG2BCLAF1
chr2122283488122283537-CDS,intron-Distal,intron-Proximal4.443473.95187HepG2AQR
chr2122205001122205080-CDS,intron-Distal3.439939.94493HepG2PPIG
chr2122165287122165347-CDS,intron-Distal,intron-Proximal3.358795.46476K562AQR
chr2122286250122286328-CDS,intron-Distal,intron-Proximal3.312559.47710HepG2PPIG
chr2122286181122286255-CDS,intron-Distal,intron-Proximal4.193095.90868HepG2PRPF8
chr2122220144122220177-CDS,intron-Distal4.310874.16170K562UCHL5
chr2122218657122218719-CDS,intron-Distal,intron-Proximal5.2596722.33420HepG2BCLAF1
chr2122273310122273338-CDS,intron-Distal3.5681412.00921HepG2BCLAF1
chr2122220142122220170-CDS,intron-Distal3.523384.93175HepG2GRWD1
chr2122220122122220178-CDS,intron-Distal3.690926.84505K562ZNF622
chr2122216415122216457-CDS,intron-Distal,intron-Proximal5.0221011.54096HepG2BCLAF1
chr2122285382122285430-CDS,intron-Distal3.723455.40651HepG2PPIG
chr2122187648122187687-CDS,intron-Distal,intron-Proximal3.662146.98305HepG2PPIG
chr2122168394122168473-CDS,intron-Distal,intron-Proximal4.704037.46483HepG2PRPF8
chr2122227382122227434-CDS,intron-Distal,intron-Proximal3.805857.10608HepG2GRWD1
chr2122287825122287894-CDS,intron-Distal3.458617.36645HepG2PPIG
chr2122218670122218726-CDS,intron-Distal,intron-Proximal3.617365.12958K562UCHL5
chr2122227442122227474-CDS,intron-Distal3.365364.96088HepG2GRWD1
chr2122205822122205901-CDS,intron-Distal,intron-Proximal3.041409.65606HepG2PPIG
chr2122168341122168448-CDS,intron-Distal,intron-Proximal3.276563.49653K562PRPF8
chr2122283460122283521-CDS,intron-Distal,intron-Proximal3.275874.63145K562BUD13
chr2122363279122363334-CDS,intron-Distal4.073677.39306HepG2PPIG
chr2122287825122287878-CDS,intron-Distal3.356908.84415HepG2BCLAF1
chr2122165052122165093-CDS,intron-Distal,intron-Proximal3.469148.47761HepG2BCLAF1
chr2122166584122166651-CDS,intron-Distal,intron-Proximal3.470288.01175HepG2U2AF2
chr2122166587122166645-CDS,intron-Distal,intron-Proximal3.821663.00221HepG2U2AF1
chr2122182841122182893-CDS,intron-Distal,intron-Proximal3.305637.36622HepG2U2AF2
chr2122165259122165383-CDS,intron-Distal,intron-Proximal3.3787513.47139HepG2U2AF2
chr2122220170122220181-CDS,intron-Distal3.337604.27261HepG2GRWD1
chr2122161949122161996-CDS,intron-Distal3.321419.03865HepG2BCLAF1
chr2122220107122220144-CDS,intron-Distal,intron-Proximal4.3070516.95425HepG2BCLAF1
chr2122273240122273254-CDS,intron-Distal,intron-Proximal5.0591011.54096HepG2BCLAF1
chr2122363290122363318-CDS,intron-Distal3.169416.59678HepG2BCLAF1
chr2122220144122220181-CDS,intron-Distal3.904328.81620HepG2BCLAF1
chr2122273201122273260-CDS,intron-Distal,intron-Proximal4.772484.75655HepG2PRPF8
chr2122206589122206655-CDS,intron-Distal3.343595.59833HepG2GRWD1
chr2122220106122220142-CDS,intron-Distal,intron-Proximal3.987207.35476HepG2GRWD1
chr2122218719122218769-CDS,intron-Distal4.3809226.75343HepG2BCLAF1
chr2122205830122205859-CDS,intron-Distal,intron-Proximal3.399907.70481K562AQR
chr2122165186122165288-CDS,intron-Distal3.057693.27746HepG2LIN28B
chr2122216526122216602-CDS,intron-Distal,intron-Proximal4.113245.02403K562SF3B4
chr2122273246122273314-CDS,intron-Distal3.061454.38519K562BUD13
chr2122218688122218766-CDS,intron-Distal3.632623.05298K562GRWD1
chr2122287878122287900-CDS,intron-Distal3.033783.85381HepG2BCLAF1
chr2122218668122218721-CDS,intron-Distal,intron-Proximal3.128154.61701K562ZNF622
chr2122285428122285467-CDS,intron-Distal,intron-Proximal4.047453.70678K562BUD13
chr2122273254122273303-CDS,intron-Distal4.3383515.80902HepG2BCLAF1
chr2122216520122216580-CDS,intron-Distal,intron-Proximal3.287995.62662K562BUD13
chr2122283419122283450-CDS,intron-Distal,intron-Proximal3.7990413.02953HepG2BCLAF1
chr2122216482122216565-CDS,intron-Distal,intron-Proximal3.296328.75397HepG2U2AF2
chr2122217511122217610-CDS,intron-Distal,intron-Proximal3.3983418.50996HepG2PRPF8
chr2122205847122205902-CDS,intron-Distal,intron-Proximal3.548846.87242K562DDX24
chr2122286185122286256-CDS,intron-Distal,intron-Proximal6.1638114.81397K562AQR
chr2122161897122161948-CDS,intron-Distal,intron-Proximal4.274736.80869K562AQR
chr2122182853122182883-CDS,intron-Distal,intron-Proximal3.343744.24993HepG2PPIG
chr2122205841122205902-CDS,intron-Distal,intron-Proximal3.5533611.60048K562ZNF622
chr2122220139122220178-CDS,intron-Distal3.692054.24993HepG2PPIG
chr2122205803122205904-CDS,intron-Distal,intron-Proximal4.1636810.95071HepG2PRPF8
chr2122161843122161949-CDS,intron-Distal,intron-Proximal4.127146.35873K562PRPF8
chr2122202326122202445-intron-Distal,intron-Proximal5.628539.07158HepG2RBFOX2
chr2122241868122241932-intron-Distal3.212696.59727HepG2SUGP2
chr2122339798122339894-intron-Distal5.9473516.57054K562PTBP1
chr2122308444122308483-intron-Distal4.120983.96879HepG2MATR3
chr2122339964122340032-intron-Distal4.2260014.91304HepG2PTBP1
chr2122390878122391046-intron-Distal3.023966.82127K562KHSRP
chr2122369926122369985-intron-Distal4.725476.62062HepG2PTBP1
chr2122300432122300502-intron-Distal3.221023.06005HepG2QKI
chr2122168314122168388-intron-Distal,intron-Proximal4.084987.40091HepG2U2AF2
chr2122209204122209319-intron-Distal,intron-Proximal4.712106.08021K562PRPF8
chr2122384642122384683-intron-Distal4.219103.74583HepG2PTBP1
chr2122206087122206159-intron-Distal3.803353.45805K562KHSRP
chr2122251165122251235-intron-Distal5.312318.87179HepG2HNRNPM
chr2122195824122195869-intron-Distal4.655334.44649HepG2HLTF
chr2122242120122242164-intron-Distal3.122904.63410HepG2SUGP2
chr2122257834122257913-intron-Distal4.659425.26569K562MATR3
chr2122214009122214097-intron-Distal6.2014215.62699K562PTBP1
chr2122242523122242578-intron-Distal3.796256.02877HepG2SUGP2
chr2122215680122215746-intron-Distal3.5393010.93931K562KHSRP
chr2122384683122384747-intron-Distal3.079864.30137HepG2PTBP1
chr2122236274122236334-intron-Distal6.7657218.28826HepG2DKC1
chr2122370060122370114-intron-Distal5.108618.66996HepG2PTBP1
chr2122354080122354151-intron-Distal4.301123.07980HepG2HNRNPM
chr2122306561122306578-intron-Distal3.957253.01445K562EXOSC5
chr2122216211122216279-intron-Distal4.666045.60990HepG2KHSRP
chr2122367718122367818-intron-Distal5.402048.42544K562PTBP1
chr2122279400122279559-intron-Distal3.925623.49140K562RBFOX2
chr2122187340122187404-intron-Distal4.002263.73609HepG2KHSRP
chr2122236143122236205-intron-Distal4.551284.37192HepG2FUBP3
chr2122195968122196135-intron-Distal3.491834.90935K562SAFB2
chr2122362401122362472-intron-Distal3.299464.33009HepG2SUGP2
chr2122334471122334589-intron-Distal4.352544.51735HepG2QKI
chr2122236139122236234-intron-Distal5.630969.08542K562CSTF2T
chr2122340044122340136-intron-Distal6.0017022.70665K562PTBP1
chr2122310133122310161-intron-Distal4.014993.30696K562EXOSC5
chr2122251175122251236-intron-Distal5.4897811.33292K562EXOSC5
chr2122306549122306599-intron-Distal3.199933.35050HepG2SUGP2
chr2122308249122308336-intron-Distal5.8516713.32155K562EXOSC5
chr2122240962122241081-intron-Distal4.4576324.17037HepG2HNRNPL
chr2122287612122287791-intron-Distal,intron-Proximal5.721469.47875HepG2DDX59
chr2122258891122258977-intron-Distal3.643374.94813HepG2HNRNPM
chr2122233805122233905-intron-Distal3.797805.39941HepG2MATR3
chr2122307123122307201-intron-Distal3.914773.16028HepG2SUGP2
chr2122215501122215579-intron-Distal4.502324.85866HepG2QKI
chr2122307042122307079-intron-Distal3.214543.43875K562EXOSC5
chr2122145295122145318-intron-Distal,intron-Proximal4.653074.65563K562AQR
chr2122260567122260697-intron-Distal,intron-Proximal3.824934.93376K562PRPF8
chr2122232376122232424-intron-Distal3.309023.10883HepG2SUGP2
chr2122242381122242416-intron-Distal3.173693.35050HepG2SUGP2
chr2122369971122370093-intron-Distal4.298405.28137HepG2MATR3
chr2122257796122257906-intron-Distal8.1346658.12328K562PTBP1
chr2122305429122305488-intron-Distal3.265743.10961HepG2MATR3
chr2122246862122246973-intron-Distal3.381264.10408K562KHSRP
chr2122239991122240099-intron-Distal4.071993.98115K562MATR3
chr2122279457122279495-intron-Distal3.160883.06005HepG2QKI
chr2122126191122126254-intron-Distal4.205694.48296K562LIN28B
chr2122231081122231131-intron-Distal4.079397.57837HepG2MATR3
chr2122236126122236355-intron-Distal7.7145369.16541K562EIF4G2
chr2122339789122339919-intron-Distal3.320743.32889K562MATR3
chr2122253772122253795-intron-Distal3.936303.29248HepG2SUGP2
chr2122184368122184483-intron-Distal3.414824.98593K562KHSRP
chr2122236138122236235-intron-Distal4.090083.69819HepG2CSTF2T
chr2122186475122186555-intron-Distal3.995653.27946HepG2HNRNPM
chr2122309044122309067-intron-Distal4.167983.89080K562EXOSC5
chr2122260322122260392-intron-Distal3.384174.40773HepG2SUGP2
chr2122239978122240021-intron-Distal3.431733.84798HepG2MATR3
chr2122309722122309761-intron-Distal5.3270210.01029K562EXOSC5
chr2122241167122241218-intron-Distal3.753687.92375HepG2HNRNPL
chr2122355118122355207-intron-Distal3.994265.91877HepG2QKI
chr2122236472122236537-intron-Distal4.434963.99130HepG2FAM120A
chr2122362641122362705-intron-Distal4.749735.12432K562EXOSC5
chr2122231268122231369-intron-Distal3.966923.39827HepG2MATR3
chr2122309608122309667-intron-Distal3.296254.08528HepG2SUGP2
chr2122236056122236240-intron-Distal4.7805411.54913HepG2FAM120A
chr2122205773122205830-intron-Distal,intron-Proximal4.9431510.60410K562AQR
chr2122361175122361265-intron-Distal3.079153.11000HepG2HNRNPM
chr2122236145122236208-intron-Distal3.593063.22368HepG2TIAL1
chr2122369994122370091-intron-Distal5.775857.91717K562PTBP1
chr2122257724122257788-intron-Distal3.821095.80375HepG2PTBP1
chr2122195397122195512-intron-Distal5.6235510.94577HepG2HLTF
chr2122406436122406522-intron-Distal3.687215.79041HepG2PRPF4
chr2122259686122259757-intron-Distal5.160607.17304K562KHSRP
chr2122263947122264057-intron-Distal3.486663.91859HepG2SUGP2
chr2122230980122231023-intron-Distal3.402833.10883HepG2SUGP2
chr2122250953122250967-intron-Distal3.164773.14999K562EXOSC5
chr2122181107122181297-intron-Distal4.556514.79379K562KHSRP
chr2122236240122236334-intron-Distal5.098327.51888HepG2FAM120A
chr2122250375122250411-intron-Distal3.214543.43875K562EXOSC5
chr2122324791122324866-intron-Distal5.237199.40914HepG2HNRNPM
chr2122308442122308482-intron-Distal5.014997.71312K562EXOSC5
chr2122236121122236201-intron-Distal4.919094.92659K562FAM120A
chr2122265120122265170-intron-Distal3.422024.33009HepG2SUGP2
chr2122307127122307197-intron-Distal4.141877.31365K562EXOSC5
chr2122367719122367790-intron-Distal4.744266.08961HepG2PTBP1
chr2122362837122362972-intron-Distal3.497533.56114HepG2KHSRP
chr2122242206122242279-intron-Distal3.317745.11028HepG2PCBP2
chr2122253875122253957-intron-Distal3.135156.84019HepG2SUGP2
chr2122221293122221400-intron-Distal3.425817.55767HepG2CSTF2
chr2122236434122236529-intron-Distal7.5981332.02670HepG2DKC1
chr2122231320122231369-intron-Distal4.410484.90578HepG2HNRNPM
chr2122214016122214099-intron-Distal5.4035830.34264HepG2PTBP1
chr2122216199122216265-intron-Distal4.708947.17304K562KHSRP
chr2122256589122256679-intron-Distal3.5140010.18635HepG2SUGP2
chr2122186884122187001-intron-Distal5.024877.20537HepG2RBFOX2
chr2122250640122250697-intron-Distal3.982413.60235HepG2HNRNPM
chr2122236939122237068-intron-Distal4.245226.83037K562KHSRP
chr2122339957122340030-intron-Distal6.1006014.75132K562PTBP1
chr2122196061122196150-intron-Distal3.069184.80573HepG2HLTF
chr2122340046122340145-intron-Distal3.185095.31223HepG2MATR3
chr2122273361122273422-intron-Distal,intron-Proximal4.525045.31973HepG2SF3B4
chr2122361455122361539-intron-Distal4.312135.61842HepG2MATR3
chr2122256501122256554-intron-Distal3.653055.30446HepG2SUGP2
chr2122393137122393223-intron-Distal4.133843.05187HepG2QKI
chr2122258029122258082-intron-Distal5.4832911.31526HepG2PTBP1
chr2122369834122369880-intron-Distal3.727584.78196HepG2PTBP1
chr2122202430122202480-intron-Distal,intron-Proximal4.160883.84494HepG2QKI
chr2122237261122237350-intron-Distal4.364736.26655K562EIF4G2
chr2122213542122213602-intron-Distal4.576525.85495HepG2QKI
chr2122230410122230462-intron-Distal3.226164.40773HepG2SUGP2
chr2122340132122340173-intron-Distal3.623396.07207HepG2PTBP1
chr2122214024122214110-intron-Distal4.022013.62238HepG2MATR3
chr2122236355122236612-intron-Distal7.2031647.56016K562EIF4G2
chr2122187292122187418-intron-Distal3.331493.73266K562KHSRP
chr2122202412122202498-intron-Distal,intron-Proximal3.431004.65362K562RBFOX2
chr2122250652122250693-intron-Distal4.325733.59917K562EXOSC5
chr2122236334122236422-intron-Distal7.1417122.53860HepG2DKC1
chr2122308768122308813-intron-Distal4.120983.96879HepG2MATR3
chr2122161869122161897-intron-Distal,intron-Proximal3.531115.34337K562AQR
chr2122361454122361528-intron-Distal3.708354.48652HepG2PTBP1
chr2122320062122320130-intron-Distal5.4394110.20783HepG2HNRNPM
chr2122368271122368353-intron-Distal4.796764.67693K562PTBP1
chr2122201871122201962-intron-Distal3.794747.41200HepG2HNRNPL
chr2122231080122231152-intron-Distal4.528264.75674K562MATR3
chr2122346182122346272-intron-Distal4.520134.10387HepG2SFPQ
chr2122236134122236204-intron-Distal4.009583.08314K562TARDBP
chr2122309603122309668-intron-Distal5.8862412.98926K562EXOSC5
chr2122172832122172924-intron-Distal3.191584.10915HepG2QKI
chr2122230491122230601-intron-Distal3.114964.79046HepG2SUGP2
chr2122258783122258863-intron-Distal4.021413.62366HepG2HNRNPM
chr2122322464122322566-intron-Distal3.166773.93186HepG2MATR3
chr2122308121122308158-intron-Distal4.368867.61465K562EXOSC5
chr2122279574122279655-intron-Distal3.390576.22064HepG2QKI
chr2122384944122384998-intron-Distal3.977386.29995HepG2HNRNPM
chr2122316516122316626-intron-Distal4.632616.08412HepG2HNRNPM
chr2122309368122309409-intron-Distal4.903797.06230K562EXOSC5
chr2122217799122217875-intron-Distal,intron-Proximal3.051185.22328K562KHSRP
chr2122231190122231232-intron-Distal4.658525.37222HepG2MATR3
chr2122195747122195791-intron-Distal3.422503.61820HepG2HLTF
chr2122287654122287783-intron-Distal,intron-Proximal4.598864.05003HepG2PCBP2
chr2122153737122153840-intron-Distal3.946086.74598HepG2QKI
chr2122360093122360272-intron-Distal4.861835.37406HepG2HNRNPM
chr2122184799122184897-intron-Distal,intron-Proximal3.965323.50357HepG2QKI
chr2122236163122236226-intron-Distal5.9295212.46711K562AATF
chr2122236153122236235-intron-Distal4.370743.75546HepG2KHSRP
chr2122215678122215740-intron-Distal4.029446.36119HepG2KHSRP
chr2122236291122236404-intron-Distal5.8055612.46711K562AATF
chr2122317908122317975-intron-Distal4.255743.45317HepG2HNRNPL
chr2122242184122242283-intron-Distal3.248374.00631HepG2PTBP1
chr2122287629122287774-intron-Distal,intron-Proximal5.331699.27360HepG2HNRNPK
chr2122367832122367909-intron-Distal4.841305.41525HepG2PCBP2
chr2122250833122250865-intron-Distal4.559199.69330K562EXOSC5
chr2122253655122253712-intron-Distal4.059527.95181HepG2SUGP2
chr2122253653122253708-intron-Distal3.096648.13804HepG2HNRNPM
chr2122300928122301023-intron-Distal4.313893.86368HepG2HNRNPM
chr2122184433122184517-intron-Distal3.327013.81210HepG2KHSRP
chr2122159259122159348-intron-Distal,intron-Proximal4.368264.54401K562KHSRP
chr2122121051122121127-intron-Distal4.296169.07264HepG2XPO5
chr2122220209122220304-intron-Distal,intron-Proximal4.131304.54401K562KHSRP
chr2122237261122237360-intron-Distal4.764425.48218K562FAM120A
chr2122305336122305394-intron-Distal4.703895.97584HepG2MATR3
chr2122369985122370060-intron-Distal4.5887510.89104HepG2PTBP1
chr2122279502122279545-intron-Distal3.955775.57156HepG2QKI
chr2122256679122256786-intron-Distal4.262547.67565HepG2HNRNPM
chr2122217728122217789-intron-Distal,intron-Proximal3.619493.78824HepG2KHSRP
chr2122187132122187217-intron-Distal4.963745.31925HepG2QKI
chr2122305336122305391-intron-Distal5.015988.03988K562EXOSC5
chr2122340138122340219-intron-Distal4.124185.64899HepG2PCBP2
chr2122257822122257911-intron-Distal7.0966361.94159HepG2PTBP1
chr2122236256122236384-intron-Distal4.756446.37885HepG2IGF2BP1
chr2122339796122339880-intron-Distal5.6170338.16253HepG2PTBP1
chr2122236138122236263-intron-Distal3.998924.33867K562FUS
chr2122231501122231537-intron-Distal3.381963.39827HepG2MATR3
chr2122166303122166396-intron-Distal3.378555.14345HepG2KHSRP
chr2122308773122308816-intron-Distal5.066606.73640K562EXOSC5
chr2122324427122324503-intron-Distal3.066384.01262HepG2HNRNPM
chr2122237554122237646-intron-Distal4.449475.23073HepG2STAU2
chr2122236134122236216-intron-Distal4.941735.84224K562EWSR1
chr2122257818122257911-intron-Distal3.268354.41146HepG2MATR3
chr2122340043122340132-intron-Distal6.0701035.48464HepG2PTBP1
chr2122307985122308044-intron-Distal5.5638311.66247K562EXOSC5
chr2122184364122184427-intron-Distal3.827013.22073HepG2KHSRP
chr2122240963122241006-intron-Distal3.318175.58293K562HNRNPL
chr2122240917122241009-intron-Distal3.7433910.17391K562AGGF1
chr2122277493122277545-intron-Distal3.366754.14896HepG2HNRNPM
chr2122308257122308344-intron-Distal3.749307.48827HepG2MATR3
chr2122236143122236262-intron-Distal7.2620546.17404HepG2DKC1
chr2122259773122259842-intron-Distal4.543495.60990HepG2KHSRP
chr2122174665122174753-intron-Distal3.320193.68481HepG2HNRNPM
chr2122291998122292024-intron-Distal4.451713.60235HepG2HNRNPM
chr2122354777122354905-intron-Distal3.129413.73766HepG2SFPQ
chr2122325145122325191-intron-Distal4.777115.68226HepG2HNRNPM
chr2122353297122353328-intron-Distal3.482414.38996HepG2HNRNPM
chr2122236726122236771-intron-Distal3.801965.90869K562EIF4G2
chr2122236155122236240-intron-Distal4.479645.14669HepG2IGF2BP1
chr2122361454122361526-intron-Distal4.019574.22415K562PTBP1
chr2122241006122241033-intron-Distal4.129396.23150K562HNRNPL
chr2122312806122312899-intron-Distal4.180034.53347HepG2SUGP2
chr2122362934122363047-intron-Distal3.370884.08064K562KHSRP
chr2122352892122353033-intron-Distal4.302779.93837HepG2QKI
chr2122231368122231442-intron-Distal3.699318.52173HepG2SUGP2
chr2122232380122232509-intron-Distal5.1802217.13440HepG2QKI
chr2122368262122368375-intron-Distal4.189705.65979HepG2PTBP1
chr2122369507122369619-intron-Distal5.610229.01334HepG2PCBP2
chr2122237755122237798-intron-Distal3.978283.51329HepG2MATR3
chr2122258293122258375-intron-Distal4.237274.31512K562KHSRP
chr2122309510122309549-intron-Distal4.500984.80399K562EXOSC5
chr2122251022122251067-intron-Distal3.535319.19064K562EXOSC5
chr2122233812122233887-intron-Distal4.062915.95943HepG2HNRNPM
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CLASP1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CLASP1 is not available on ENCORE database.

  • 61 RBPs can affect the levels of CLASP1.  








The Knockdown/knockout RNA-Seq assay for CLASP1 is not available on ENCORE database.





61 RBPs can affect the gene expression of CLASP1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CLASP1ENSG00000074054.133198.421702813.487300.184902.397401.82460HepG2ACO1
CLASP1ENSG00000074054.131928.468402522.01700-0.387103.151002.31210HepG2ASCC1
CLASP1ENSG00000074054.131671.580402206.82400-0.400802.288501.44020HepG2BCCIP
CLASP1ENSG00000074054.135220.850103937.905800.406802.784801.80620HepG2CCAR1
CLASP1ENSG00000074054.131926.768402339.33990-0.279903.365502.24240HepG2YBX3
CLASP1ENSG00000074054.133239.843402411.137900.426103.803703.11590HepG2EIF2S1
CLASP1ENSG00000074054.133860.151502664.497300.534705.038504.17980HepG2EIF4A3
CLASP1ENSG00000074054.132683.779303124.53190-0.219402.560401.74950HepG2EIF4G1
CLASP1ENSG00000074054.132695.185201748.581200.624109.739708.31450HepG2FUBP3
CLASP1ENSG00000074054.133322.450902493.967400.413703.365602.63570HepG2G3BP1
CLASP1ENSG00000074054.133321.482502647.860700.326902.572501.71620HepG2G3BP2
CLASP1ENSG00000074054.132097.917702910.59620-0.472409.759808.20050HepG2HNRNPA2B1
CLASP1ENSG00000074054.133339.329002579.520800.372403.919203.10450HepG2HNRNPC
CLASP1ENSG00000074054.132199.429302562.46610-0.220402.784702.17510HepG2HNRNPU
CLASP1ENSG00000074054.132325.026003128.60230-0.428303.013801.76080HepG2KHDRBS1
CLASP1ENSG00000074054.133469.900502689.589100.367402.922402.24900HepG2MAGOH
CLASP1ENSG00000074054.132148.026002553.11210-0.249202.078401.37220HepG2MSI2
CLASP1ENSG00000074054.132047.929101674.265000.290502.313401.57150HepG2PRPF8
CLASP1ENSG00000074054.132940.790302423.950300.278704.261603.61430HepG2PTBP1
CLASP1ENSG00000074054.132479.236903179.97500-0.359104.511503.66610HepG2PUM2
CLASP1ENSG00000074054.132553.971302865.67980-0.166101.948001.41190HepG2PUS1
CLASP1ENSG00000074054.134083.515802624.944800.6374015.1573013.86150HepG2QKI
CLASP1ENSG00000074054.133317.122202697.525200.298204.882604.19980HepG2NELFE
CLASP1ENSG00000074054.131905.800602281.98570-0.259903.820403.08420HepG2SAFB2
CLASP1ENSG00000074054.132285.856102661.17480-0.219303.547602.83410HepG2SMN1
CLASP1ENSG00000074054.134468.109303950.535100.177502.429401.94930HepG2SRFBP1
CLASP1ENSG00000074054.134132.986302634.003700.6498023.3861022.30420HepG2SRSF1
CLASP1ENSG00000074054.134285.306403429.968700.321106.334105.61600HepG2SSB
CLASP1ENSG00000074054.133244.651702367.786500.454408.541507.64520HepG2TAF15
CLASP1ENSG00000074054.131556.065002489.89120-0.6782013.5902012.62450HepG2TIAL1
CLASP1ENSG00000074054.13857.494101276.10190-0.573505.017803.98990HepG2UCHL5
CLASP1ENSG00000074054.133164.928502593.685700.287105.431804.54050HepG2ZC3H8
CLASP1ENSG00000074054.133094.326003644.37620-0.236004.483903.83130HepG2ZNF622
CLASP1ENSG00000074054.131932.843002375.56320-0.297504.260603.58270K562AGGF1
CLASP1ENSG00000074054.131826.313302471.86340-0.436704.835803.96360K562AKAP8L
CLASP1ENSG00000074054.132616.902802056.083400.347903.060002.44950K562AQR
CLASP1ENSG00000074054.132091.828002593.54610-0.310203.857002.76380K562ATP5C1
CLASP1ENSG00000074054.131654.646701251.934800.402303.337302.37750K562BOP1
CLASP1ENSG00000074054.131663.193201331.155300.321202.896202.09530K562CPSF6
CLASP1ENSG00000074054.131162.118201411.79530-0.280802.694601.41110K562DDX6
CLASP1ENSG00000074054.132201.266702660.01380-0.273103.395602.41180K562DKC1
CLASP1ENSG00000074054.131901.005001333.277900.511704.292802.96760K562EIF3D
CLASP1ENSG00000074054.131849.733501454.810000.346403.099802.23270K562EIF4A3
CLASP1ENSG00000074054.131371.735601681.26790-0.293502.231601.46920K562FIP1L1
CLASP1ENSG00000074054.131912.283201354.439500.497505.148503.97640K562FMR1
CLASP1ENSG00000074054.131560.452901148.018600.442703.559702.51160K562FTO
CLASP1ENSG00000074054.131548.116601270.917100.284502.122401.42370K562GPKOW
CLASP1ENSG00000074054.131743.007302170.54080-0.316502.930602.15430K562GRSF1
CLASP1ENSG00000074054.131953.377001246.795000.647609.974608.89840K562HNRNPC
CLASP1ENSG00000074054.131033.899101382.85730-0.419603.001202.02720K562HNRNPM
CLASP1ENSG00000074054.131441.650901085.227100.409602.398301.53730K562KRR1
CLASP1ENSG00000074054.131540.269101240.560600.312102.516901.68540K562METAP2
CLASP1ENSG00000074054.132119.739601842.845000.201902.235801.50460K562MTPAP
CLASP1ENSG00000074054.132409.057902047.504700.234503.978203.10290K562NSUN2
CLASP1ENSG00000074054.132481.918601924.695600.366702.760601.93080K562PCBP3
CLASP1ENSG00000074054.131876.138101476.312800.345703.629502.70610K562POLR2G
CLASP1ENSG00000074054.131357.002901908.55790-0.492105.226904.04180K562PPIG
CLASP1ENSG00000074054.132727.674603213.84260-0.236602.779201.81770K562PUM2
CLASP1ENSG00000074054.131573.509602451.53790-0.639708.357907.46180K562PUS1
CLASP1ENSG00000074054.131865.514602388.54860-0.356604.655603.90660K562RBM15
CLASP1ENSG00000074054.132349.703102070.009300.182702.234901.38470K562SRPK2
CLASP1ENSG00000074054.131997.439901612.150300.309102.931902.20720K562SRSF1
CLASP1ENSG00000074054.132030.325801669.540600.282202.514801.40210K562SRSF7
CLASP1ENSG00000074054.131491.124301173.263800.345802.297001.37570K562SUPV3L1
CLASP1ENSG00000074054.132351.872201857.663200.340203.538502.55070K562WDR3
CLASP1ENSG00000074054.132989.559602436.425400.295102.866701.54950K562WRN
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CLASP1 is not available on ENCORE database.





23 RBPs can affect the splicing of CLASP1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECLASP1ENSG00000074054.13chr2-1221665991221666231221650461221652911221684411221685450.354000.000000.00005includedK562SRSF1
SECLASP1ENSG00000074054.13chr2-122160170122160239122159443122159446122161946122162010-0.178000.000040.00151excludedK562SRSF1
SECLASP1ENSG00000074054.13chr2-122159443122159446122159084122159248122161946122162010-0.355000.000000.00020excludedK562SF3B4
SECLASP1ENSG00000074054.13chr2-1221665991221666231221650461221652911221684411221685450.256000.000030.00408includedHepG2RBM22
SECLASP1ENSG00000074054.13chr2-1221665991221666231221650461221652911221684411221685450.297000.000090.00259includedHepG2U2AF1
SECLASP1ENSG00000074054.13chr2-1221601701221602391221594431221594461221619461221620100.078000.000450.08900includedHepG2ILF3
SECLASP1ENSG00000074054.13chr2-1221451631221452301221446971221448041221453381221456520.116000.000060.01156includedK562FMR1
SECLASP1ENSG00000074054.13chr2-122203024122203072122187648122187753122204912122205083-0.320000.000250.06572excludedK562WDR43
SECLASP1ENSG00000074054.13chr2-1221665991221666231221650461221652911221684411221685450.389000.000000.00002includedHepG2HNRNPK
SECLASP1ENSG00000074054.13chr2-1221665991221666231221650461221652911221684411221685450.272000.000470.04303includedHepG2QKI
SECLASP1ENSG00000074054.13chr2-1221451631221452301221446971221448041221453381221456520.093000.000440.08186includedK562METAP2
SECLASP1ENSG00000074054.13chr2-1221451631221452301221446971221448041221453381221456520.051000.001480.01696includedK562AQR
SECLASP1ENSG00000074054.13chr2-1221601701221602391221594431221594461221619461221620100.221000.000230.00353includedK562AQR
SECLASP1ENSG00000074054.13chr2-122159443122159446122159084122159248122161946122162010-0.243000.000010.00024excludedK562AQR
SECLASP1ENSG00000074054.13chr2-122203024122203072122187648122187753122204912122205083-0.163000.000400.03562excludedHepG2DDX3X
SECLASP1ENSG00000074054.13chr2-1221665991221666231221650461221652911221684411221685450.538000.000000.00000includedHepG2PTBP1
SECLASP1ENSG00000074054.13chr2-122203024122203072122187648122187753122204912122205083-0.148000.000500.02946excludedHepG2PTBP1
SECLASP1ENSG00000074054.13chr2-1221665991221666231221650461221652911221684411221685450.374000.000000.00008includedHepG2MATR3
SECLASP1ENSG00000074054.13chr2-1221665991221666231221650461221652911221684411221685450.499000.000000.00019includedK562U2AF1
SECLASP1ENSG00000074054.13chr2-122159443122159446122159084122159248122161946122162010-0.190000.002760.05164excludedK562U2AF1
SECLASP1ENSG00000074054.13chr2-122166599122166623122165046122165291122168441122168545-0.321000.000000.00051excludedHepG2DDX6
SECLASP1ENSG00000074054.13chr2-1221451631221452301221446971221448041221453381221456520.061000.000310.07531includedHepG2CDC40
SECLASP1ENSG00000074054.13chr2-1221665991221666231221650461221652911221684411221685450.360000.000000.00009includedHepG2SRSF1
SECLASP1ENSG00000074054.13chr2-122203024122203072122187648122187753122204912122205083-0.157000.000040.00178excludedHepG2SRSF1
SECLASP1ENSG00000074054.13chr2-1221665991221666231221650461221652911221684411221685450.218000.000670.02720includedK562TARDBP
SECLASP1ENSG00000074054.13chr2-1222030241222030721221876481221877531222049121222050830.283000.000070.02525includedHepG2EIF3D
SECLASP1ENSG00000074054.13chr2-1221665991221666231221650461221652911221684411221685450.333000.000000.00042includedK562HNRNPK
SECLASP1ENSG00000074054.13chr2-122203024122203072122187648122187753122204912122205083-0.162000.000120.00682excludedHepG2HNRNPC
SECLASP1ENSG00000074054.13chr2-1221665991221666231221650461221652911221684411221685450.443000.000160.04204includedK562SAFB
SECLASP1ENSG00000074054.13chr2-1221665991221666231221650461221652911221684411221685450.603000.000000.00000includedK562PTBP1
A3SSCLASP1ENSG00000074054.13chr2-1221350741221352741221350741221352251221446971221448040.079000.012240.06281longerK562AQR
A3SSCLASP1ENSG00000074054.13chr2-1220982971220985421220982971220985231221046131221047300.114000.000890.00624longerK562AQR
A3SSCLASP1ENSG00000074054.13chr2-1222049121222051491222049121222050831222058511222059420.059000.014010.07057longerK562AQR
A3SSCLASP1ENSG00000074054.13chr2-1221207471221209221221207471221208761221226691221228600.182000.000000.00002longerK562AQR
A3SSCLASP1ENSG00000074054.13chr2-1222065281222067171222065281222066961222084881222085660.062000.000210.01343longerK562PUS1
A5SSCLASP1ENSG00000074054.13chr2-122217555122217701122217584122217701122216415122216551-0.293000.001100.08515shorterK562UTP18
MXECLASP1ENSG00000074054.13chr2-1221594431221594461221601661221602391221590841221592481221619461221620100.143000.002900.069001includedK562XRN2
MXECLASP1ENSG00000074054.13chr2-122204912122205083122205851122205901122187648122187753122206528122206696-0.214000.004320.079382includedK562TARDBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CLASP1 is not avaliable on ENCORE database.