CERK

General Information

Gene Name       : CERK
Gene ID             : ENSG00000100422.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CERK)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CERKENSG00000100422.139.6318.2613.95ENCSR000AEF
HepG2CERKENSG00000100422.1331.6024.3727.98ENCSR985KAT
K562CERKENSG00000100422.135.765.835.79ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CERK is not avaliable on ENCORE database.



Proteins bound to RNA
  • CERK RNA is bound by 19 proteins.  







eCLIP assay for CERK is not avaliable on ENCORE database.





19 proteins are bound to CERK RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr224708932047089381-3'-UTR,CDS,intron-Distal,intron-Proximal3.988365.73400HepG2PPIG
chr224709516047095242-3'-UTR,CDS,intron-Distal,intron-Proximal5.4813216.49005HepG2PRPF8
chr224708761047087677-3'-UTR,CDS,intron-Distal,intron-Proximal3.135665.41373HepG2PPIG
chr224708242247082503-3'-UTR,intron-Distal3.063353.75909HepG2IGF2BP1
chr224709749247097585-3'-UTR,CDS,intron-Distal,intron-Proximal4.187516.04280HepG2PRPF8
chr224709514947095213-3'-UTR,CDS,intron-Distal,intron-Proximal4.176913.85435K562PRPF8
chr224708597747086060-3'-UTR,CDS,intron-Distal4.363073.80193HepG2GRWD1
chr224708303147083093-3'-UTR,CDS,intron-Distal4.313734.38106HepG2PPIG
chr224710374647103876-3'-UTR,CDS,intron-Distal3.250977.61685HepG2PPIG
chr224710376547103848-3'-UTR,CDS,intron-Distal4.834788.08487HepG2GRWD1
chr224713399147134113-5'-UTR,CDS,intron-Distal,intron-Proximal4.7099929.90724HepG2DDX3X
chr224713390347133991-5'-UTR,CDS,intron-Distal,intron-Proximal3.9450522.09141HepG2DDX3X
chr224711680747116895-5'-UTR,CDS,intron-Distal3.413606.42383HepG2GRWD1
chr224713390047133977-5'-UTR,CDS,intron-Distal4.000128.32201HepG2XPO5
chr224713369247133754-intron-Distal3.892177.75469HepG2EFTUD2
chr224712368547123747-intron-Distal4.080563.97974HepG2RBFOX2
chr224711422047114334-intron-Distal3.754987.33240HepG2PCBP2
chr224710328247103356-intron-Distal3.866603.29554HepG2GTF2F1
chr224711711247117172-intron-Distal3.691563.24590HepG2ILF3
chr224712753847127621-intron-Distal3.227033.23948HepG2HNRNPK
chr224713377347133861-intron-Distal4.547645.11005HepG2PRPF4
chr224713358247133669-intron-Distal3.134079.31434HepG2CSTF2T
chr224710946347109602-intron-Distal3.078183.33745HepG2HNRNPM
chr224712641347126498-intron-Distal4.399434.07628HepG2PTBP1
chr224713368447133771-intron-Distal3.542606.71981HepG2PRPF4
chr224710388747103959-intron-Distal,intron-Proximal4.163463.98315HepG2SF3B4
chr224710325747103445-intron-Distal4.4868611.36931HepG2PRPF4
chr224711873747118878-intron-Distal3.111373.47356HepG2HNRNPK
chr224713368747133755-intron-Distal4.634635.25929HepG2GTF2F1
chr224713377447133855-intron-Distal3.832894.98844HepG2FAM120A
chr224712363447123763-intron-Distal4.671837.09127HepG2PRPF4
chr224713379047133858-intron-Distal3.327464.37235HepG2NKRF
chr224713263747132711-intron-Distal3.156925.15026HepG2NKRF
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CERK is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CERK is not available on ENCORE database.

  • 102 RBPs can affect the levels of CERK.  








The Knockdown/knockout RNA-Seq assay for CERK is not available on ENCORE database.





102 RBPs can affect the gene expression of CERK :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CERKENSG00000100422.9884.714601136.24740-0.361002.766201.69420HepG2AATF
CERKENSG00000100422.91252.358601604.53260-0.357502.509101.61070HepG2ABCF1
CERKENSG00000100422.91733.941202763.95450-0.672706.970306.16820HepG2AKAP1
CERKENSG00000100422.9680.058201538.47890-1.1778038.9862036.65860HepG2AKAP8L
CERKENSG00000100422.9796.865001245.00800-0.643705.325604.01440HepG2BCCIP
CERKENSG00000100422.91331.262001876.87850-0.495503.468502.36590HepG2CCAR1
CERKENSG00000100422.91297.409202172.72960-0.743909.922108.53610HepG2CIRBP
CERKENSG00000100422.91126.610701530.94410-0.442408.259807.22980HepG2CKAP4
CERKENSG00000100422.9849.343402329.47610-1.4556013.1486011.53450HepG2CNOT7
CERKENSG00000100422.9323.15720866.19730-1.4225021.6275019.93790HepG2CPSF6
CERKENSG00000100422.91499.467001090.414100.459506.316504.77860HepG2YBX3
CERKENSG00000100422.9902.104601253.45760-0.474504.625503.77380HepG2DDX21
CERKENSG00000100422.9893.500601224.09670-0.454202.965502.16980HepG2DDX55
CERKENSG00000100422.93203.741202274.502200.494104.171103.42410HepG2DDX6
CERKENSG00000100422.9953.594201329.29240-0.479204.111903.01220HepG2EEF2
CERKENSG00000100422.9657.182601108.08260-0.753708.741906.76960HepG2EFTUD2
CERKENSG00000100422.9472.273701079.04000-1.1921016.8637014.87710HepG2EIF3D
CERKENSG00000100422.91227.194502416.10880-0.9773013.6806012.28030HepG2EIF4A3
CERKENSG00000100422.92363.669401769.189400.417804.046503.07530HepG2EIF4G2
CERKENSG00000100422.91027.623801496.33510-0.542106.769705.46700HepG2EWSR1
CERKENSG00000100422.9647.34600964.49110-0.575206.956305.08100HepG2FAM120A
CERKENSG00000100422.91254.315901620.15190-0.369202.355701.64160HepG2FIP1L1
CERKENSG00000100422.91109.306201656.59080-0.578607.446806.19360HepG2FUBP3
CERKENSG00000100422.91985.719702437.99990-0.296002.042801.44510HepG2FXR1
CERKENSG00000100422.91052.112802261.47230-1.1040018.0387016.41770HepG2G3BP1
CERKENSG00000100422.9769.89830981.82200-0.350802.048601.49260HepG2GPKOW
CERKENSG00000100422.9999.954702156.70100-1.1089010.222508.09050HepG2GRSF1
CERKENSG00000100422.91706.199401461.946400.222802.364301.45470HepG2HDGF
CERKENSG00000100422.9711.225101081.00370-0.604006.440505.51470HepG2HNRNPA1
CERKENSG00000100422.91312.276301720.44880-0.390705.617104.36500HepG2HNRNPA2B1
CERKENSG00000100422.91883.438002290.24940-0.282102.092901.47960HepG2HNRNPK
CERKENSG00000100422.9738.85780936.97810-0.342702.142601.58180HepG2HNRNPLL
CERKENSG00000100422.9728.721201117.72180-0.617107.748506.27760HepG2HNRNPM
CERKENSG00000100422.9797.765401194.44880-0.5823010.278009.17190HepG2HNRNPU
CERKENSG00000100422.91488.751702132.02700-0.518103.977102.49270HepG2HSPD1
CERKENSG00000100422.91455.415502298.69090-0.659407.857806.78000HepG2IGF2BP2
CERKENSG00000100422.91614.841902221.18430-0.459902.516001.39350HepG2KHDRBS1
CERKENSG00000100422.9831.450001086.52900-0.386003.128201.37380HepG2CCAR2
CERKENSG00000100422.9731.596401262.75070-0.7874010.832008.57110HepG2LIN28B
CERKENSG00000100422.91395.680402438.85220-0.8052010.904909.62770HepG2MAGOH
CERKENSG00000100422.9685.409001129.27800-0.720404.301403.00430HepG2METAP2
CERKENSG00000100422.9941.217801311.06470-0.478105.168204.08950HepG2MSI2
CERKENSG00000100422.91562.211502510.19840-0.684207.936606.88980HepG2NCBP2
CERKENSG00000100422.9533.08580830.86840-0.640304.094903.19020HepG2NSUN2
CERKENSG00000100422.93626.162602129.618100.767702.739801.85700HepG2PABPC1
CERKENSG00000100422.91722.369902294.29930-0.413707.582606.65660HepG2PCBP1
CERKENSG00000100422.9895.359701397.66630-0.642504.275202.77570HepG2PRPF6
CERKENSG00000100422.91441.619702334.53580-0.6954018.6137017.43360HepG2PTBP1
CERKENSG00000100422.91660.716101881.06100-0.179701.983001.46440HepG2PUM1
CERKENSG00000100422.91415.848801879.68230-0.408804.938004.05610HepG2PUM2
CERKENSG00000100422.91173.152201559.74330-0.410906.858605.96380HepG2PUS1
CERKENSG00000100422.9834.840601282.85530-0.619803.316702.54780HepG2RAVER1
CERKENSG00000100422.91427.960902033.52830-0.510008.497707.70540HepG2RBM22
CERKENSG00000100422.91320.799802294.64860-0.7969015.4809013.95510HepG2RBM25
CERKENSG00000100422.91078.488501450.35150-0.427403.742702.57880HepG2RBM27
CERKENSG00000100422.9533.937701177.75110-1.1413015.4640013.07370HepG2RCC2
CERKENSG00000100422.91612.153302598.11380-0.6885018.9317017.76340HepG2NELFE
CERKENSG00000100422.91999.582002419.79070-0.275203.763403.05920HepG2RECQL
CERKENSG00000100422.91748.971901387.209400.334202.748302.06720HepG2RPLP0
CERKENSG00000100422.9574.872701050.00570-0.8691013.0688011.85730HepG2RPS19
CERKENSG00000100422.91596.970502340.60840-0.551503.284102.41370HepG2RPS3A
CERKENSG00000100422.91046.409701365.40960-0.383903.057401.92650HepG2RPS5
CERKENSG00000100422.91377.295001063.721200.372605.469704.61630HepG2SAFB2
CERKENSG00000100422.9634.939301053.76170-0.730908.145106.56180HepG2SERBP1
CERKENSG00000100422.91182.713601754.44870-0.568904.009403.19180HepG2SF3A3
CERKENSG00000100422.91188.20650927.377000.357502.597801.91300HepG2SF3B1
CERKENSG00000100422.91725.490602430.55220-0.4943010.389709.35440HepG2SF3B4
CERKENSG00000100422.91398.449002296.81770-0.7158021.1756020.12930HepG2SRFBP1
CERKENSG00000100422.91530.452002536.97070-0.7291022.6341021.56290HepG2SRSF1
CERKENSG00000100422.9664.22870997.99230-0.587304.016302.78700HepG2SRSF3
CERKENSG00000100422.9937.484001749.59840-0.9002025.5910023.95960HepG2SRSF5
CERKENSG00000100422.92346.239302063.961100.184802.052101.56230HepG2SRSF9
CERKENSG00000100422.91569.654901994.22060-0.345405.288804.62450HepG2SSB
CERKENSG00000100422.91299.854402124.48040-0.708807.802005.80900HepG2SSRP1
CERKENSG00000100422.92417.926101989.767600.281104.644903.87620HepG2SUCLG1
CERKENSG00000100422.9646.671401218.57750-0.9141010.190309.02770HepG2SUPV3L1
CERKENSG00000100422.92699.222002280.329200.243202.690502.13690HepG2TAF15
CERKENSG00000100422.9634.875101160.70490-0.8705015.8634014.84370HepG2TIAL1
CERKENSG00000100422.9890.390501385.83200-0.638207.132906.13260HepG2U2AF1
CERKENSG00000100422.9400.386801201.16040-1.585006.647005.04090HepG2U2AF2
CERKENSG00000100422.9862.411601502.18800-0.8006019.5407018.16850HepG2UTP3
CERKENSG00000100422.9929.415601411.03790-0.602404.148202.85860HepG2XRCC6
CERKENSG00000100422.9617.94780387.651900.672605.745303.97860K562ABCF1
CERKENSG00000100422.9437.50810349.740600.322901.973801.47870K562AGGF1
CERKENSG00000100422.9263.27670363.92610-0.467102.360101.75550K562AKAP8L
CERKENSG00000100422.9627.35900417.942400.585905.136003.48620K562CCDC124
CERKENSG00000100422.9184.53150322.25470-0.804305.639703.83940K562CIRBP
CERKENSG00000100422.9700.34540378.733200.8868013.3574010.98880K562CPEB4
CERKENSG00000100422.9622.33080275.604301.1750017.7372014.98690K562DDX3X
CERKENSG00000100422.9654.05250391.997300.738509.932908.78890K562DDX47
CERKENSG00000100422.9486.33630391.578100.312602.083801.33480K562DKC1
CERKENSG00000100422.9433.90380302.767400.519102.500601.36430K562EIF2S1
CERKENSG00000100422.9620.51870327.741500.9208012.9976011.61630K562EIF2S2
CERKENSG00000100422.9256.69610166.040600.628402.194701.31180K562EIF3A
CERKENSG00000100422.9282.30890211.555000.416102.208501.49210K562EIF3G
CERKENSG00000100422.9899.59690463.497800.9566017.2962015.07660K562EIF4G2
CERKENSG00000100422.9567.02430283.710600.9989010.362108.65100K562FMR1
CERKENSG00000100422.9462.78730240.469400.944407.975806.33510K562FTO
CERKENSG00000100422.9320.57800217.164800.561803.067101.85890K562HNRNPF
CERKENSG00000100422.9636.16480377.830300.751606.946205.69540K562HSPD1
CERKENSG00000100422.9424.99360287.518500.563704.111402.59510K562NCBP2
CERKENSG00000100422.9646.81840476.254800.441503.090601.57430K562PNPT1
CERKENSG00000100422.9731.55990505.718700.532504.433903.40760K562PUF60
CERKENSG00000100422.9871.51380537.856900.696209.263307.24420K562PUM1
CERKENSG00000100422.9769.99560527.048700.546806.021304.58690K562PUM2
CERKENSG00000100422.9260.04290351.65180-0.435402.244101.70050K562RBM15
CERKENSG00000100422.9389.67920294.332700.404702.149601.41320K562RBM22
CERKENSG00000100422.9120.78760198.94570-0.719903.351602.26060K562RCC2
CERKENSG00000100422.9492.41790309.754300.668705.130403.57900K562NELFE
CERKENSG00000100422.9361.15710224.610800.685103.647802.70690K562RPS19
CERKENSG00000100422.9494.34930324.763600.606004.778703.73190K562SF3A3
CERKENSG00000100422.9368.19920253.185400.540202.608201.66430K562SF3B1
CERKENSG00000100422.9511.27680301.003100.764207.108005.98230K562SRSF1
CERKENSG00000100422.9794.08110570.141000.477904.265102.52380K562UBE2L3
CERKENSG00000100422.9489.80840349.040700.488703.924203.08070K562UPF1
CERKENSG00000100422.9592.30170281.016101.0756010.785808.61530K562UTP3
CERKENSG00000100422.9445.03140310.544600.519004.382703.33490K562WDR43
CERKENSG00000100422.9683.51790416.755100.713707.461405.92490K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CERK is not available on ENCORE database.





1 RBPs can affect the splicing of CERK :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECERKENSG00000100422.9chr22-4708776647087919470874684708767447089323470894000.164000.000130.03814includedHepG2EIF3D

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CERK is not avaliable on ENCORE database.