ATOX1

General Information

Gene Name : ATOX1
Gene ID : ENSG00000177556.11
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ATOX1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ATOX1	ENSG00000177556.11	87.02	157.10	122.06	ENCSR000AEF
HepG2	ATOX1	ENSG00000177556.11	174.70	134.54	154.62	ENCSR985KAT
K562	ATOX1	ENSG00000177556.11	112.58	79.70	96.14	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ATOX1 is not avaliable on ENCORE database.

Proteins bound to RNA

ATOX1 RNA is bound by 4 proteins.

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eCLIP assay for ATOX1 is not avaliable on ENCORE database.

4 proteins are bound to ATOX1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr5	151125839	151125946	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.30641	23.29672	HepG2	LARP4
chr5	151131265	151131343	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.87849	10.26816	K562	DDX3X
chr5	151122396	151122486	-	3'-UTR,intron-Distal	5.43425	10.26089	HepG2	LARP4
chr5	151138047	151138153	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.90820	7.56654	HepG2	PRPF8
chr5	151122486	151122521	-	3'-UTR,intron-Distal	4.75852	5.77937	HepG2	LARP4
chr5	151131269	151131342	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.45549	4.82666	HepG2	DDX3X
chr5	151125839	151125934	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.91968	4.77567	K562	DDX55
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 7 of 7 entries

eCLIP assay for ATOX1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ATOX1 is not available on ENCORE database.
51 RBPs can affect the levels of ATOX1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ATOX1 is not available on ENCORE database.

51 RBPs can affect the gene expression of ATOX1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ATOX1	ENSG00000177556.7	633.50540	347.59050	0.86590	8.62680	7.71670	K562	PUS1
ATOX1	ENSG00000177556.7	382.97100	628.48950	-0.71470	8.14240	7.26260	HepG2	TAF15
ATOX1	ENSG00000177556.7	558.49910	336.79430	0.72960	8.00490	7.11020	K562	AGGF1
ATOX1	ENSG00000177556.7	433.01260	696.87260	-0.68650	7.73180	6.76730	HepG2	QKI
ATOX1	ENSG00000177556.7	594.28450	350.44320	0.76190	7.21530	6.11750	K562	AKAP8L
ATOX1	ENSG00000177556.7	334.53370	642.95870	-0.94260	6.96820	5.90660	HepG2	EIF4B
ATOX1	ENSG00000177556.7	961.92250	593.82830	0.69580	6.86290	5.68020	HepG2	CIRBP
ATOX1	ENSG00000177556.7	473.49300	695.84770	-0.55540	6.24390	5.57480	HepG2	SRFBP1
ATOX1	ENSG00000177556.7	991.57470	625.04330	0.66570	6.29030	5.12950	HepG2	ASCC1
ATOX1	ENSG00000177556.7	517.84140	737.13080	-0.50940	5.76890	4.95350	HepG2	ETF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 56 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ATOX1 is not available on ENCORE database.

15 RBPs can affect the splicing of ATOX1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ATOX1	ENSG00000177556.7	chr5	-	151131264	151131340			151125839	151126010	151138106	151138340	-0.28900	0.00000	0.00000	excluded	K562	SRSF1
SE	ATOX1	ENSG00000177556.7	chr5	-	151131264	151131340			151125839	151126010	151138106	151138340	-0.14700	0.00000	0.00014	excluded	K562	HNRNPK
SE	ATOX1	ENSG00000177556.7	chr5	-	151131264	151131340			151125839	151126010	151138106	151138340	-0.33600	0.00000	0.00000	excluded	K562	HNRNPC
A3SS	ATOX1	ENSG00000177556.7	chr5	-	151131264	151131374			151131264	151131340	151138106	151138340	0.08100	0.00000	0.00004	longer	K562	AQR
A3SS	ATOX1	ENSG00000177556.7	chr5	-	151122382	151122559			151122382	151122520	151125839	151126010	0.06400	0.00000	0.00002	longer	K562	AQR
MXE	ATOX1	ENSG00000177556.7	chr5	-	151125839	151126010	151131264	151131340	151122383	151122520	151138106	151138210	-0.22300	0.00000	0.00006	2included	K562	SRSF1
SE	ATOX1	ENSG00000177556.7	chr5	-	151131264	151131340			151125839	151126010	151138106	151138340	-0.12900	0.00001	0.00280	excluded	K562	RBM22
MXE	ATOX1	ENSG00000177556.7	chr5	-	151125839	151126010	151131264	151131340	151122383	151122520	151138106	151138210	0.16300	0.00001	0.00048	1included	HepG2	DDX55
SE	ATOX1	ENSG00000177556.7	chr5	-	151133375	151133455			151131264	151131340	151138106	151138210	0.10600	0.00011	0.02550	included	K562	UPF1
SE	ATOX1	ENSG00000177556.7	chr5	-	151131264	151131340			151125839	151126010	151138106	151138340	0.08500	0.00023	0.09190	included	K562	SMNDC1

Showing 1 to 10 of 18 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ATOX1

General Information

Functions

Localization

Domains (AlphaFold: ATOX1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ATOX1 is not avaliable on ENCORE database.

4 proteins are bound to ATOX1 RNA:

eCLIP assay for ATOX1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ATOX1 is not available on ENCORE database.

51 RBPs can affect the gene expression of ATOX1 :

The Knockdown/knockout RNA-Seq assay for ATOX1 is not available on ENCORE database.

15 RBPs can affect the splicing of ATOX1 :

The Knockdown/knockout RNA-Seq assay for ATOX1 is not avaliable on ENCORE database.