ATOX1

General Information

Gene Name       : ATOX1
Gene ID             : ENSG00000177556.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ATOX1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ATOX1ENSG00000177556.1187.02157.10122.06ENCSR000AEF
HepG2ATOX1ENSG00000177556.11174.70134.54154.62ENCSR985KAT
K562ATOX1ENSG00000177556.11112.5879.7096.14ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ATOX1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ATOX1 RNA is bound by 4 proteins.  







eCLIP assay for ATOX1 is not avaliable on ENCORE database.





4 proteins are bound to ATOX1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr5151122396151122486-3'-UTR,intron-Distal5.4342510.26089HepG2LARP4
chr5151122486151122521-3'-UTR,intron-Distal4.758525.77937HepG2LARP4
chr5151125839151125946-3'-UTR,CDS,intron-Distal,intron-Proximal4.3064123.29672HepG2LARP4
chr5151125839151125934-3'-UTR,CDS,intron-Distal,intron-Proximal3.919684.77567K562DDX55
chr5151138047151138153-5'-UTR,CDS,intron-Distal,intron-Proximal3.908207.56654HepG2PRPF8
chr5151131265151131343-5'-UTR,CDS,intron-Distal,intron-Proximal3.8784910.26816K562DDX3X
chr5151131269151131342-5'-UTR,CDS,intron-Distal,intron-Proximal4.455494.82666HepG2DDX3X
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ATOX1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ATOX1 is not available on ENCORE database.

  • 51 RBPs can affect the levels of ATOX1.  








The Knockdown/knockout RNA-Seq assay for ATOX1 is not available on ENCORE database.





51 RBPs can affect the gene expression of ATOX1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ATOX1ENSG00000177556.7455.22450338.581600.427003.285202.63210HepG2ACO1
ATOX1ENSG00000177556.7991.57470625.043300.665706.290305.12950HepG2ASCC1
ATOX1ENSG00000177556.7961.92250593.828300.695806.862905.68020HepG2CIRBP
ATOX1ENSG00000177556.7472.11250338.518900.479804.167303.38340HepG2CKAP4
ATOX1ENSG00000177556.7435.45860302.493100.525502.136401.47110HepG2CNOT7
ATOX1ENSG00000177556.7686.90320543.197700.338502.728002.08920HepG2CELF1
ATOX1ENSG00000177556.7406.33650313.144500.375702.273801.51240HepG2DDX19B
ATOX1ENSG00000177556.7455.15300300.942600.596804.138803.32500HepG2DDX21
ATOX1ENSG00000177556.7476.13970323.933700.555604.280203.47310HepG2DKC1
ATOX1ENSG00000177556.7354.60180244.080200.538702.551001.66280HepG2EEF2
ATOX1ENSG00000177556.7334.53370642.95870-0.942606.968205.90660HepG2EIF4B
ATOX1ENSG00000177556.7411.55060576.21960-0.485504.388103.37680HepG2EIF4G1
ATOX1ENSG00000177556.7517.84140737.13080-0.509405.768904.95350HepG2ETF1
ATOX1ENSG00000177556.7430.28550330.864400.379002.097701.37150HepG2EWSR1
ATOX1ENSG00000177556.7216.43020334.73850-0.629103.906502.98160HepG2FUBP3
ATOX1ENSG00000177556.7445.08210264.671600.749805.844804.95240HepG2HNRNPA1
ATOX1ENSG00000177556.7400.04730294.397300.442302.227601.59900HepG2HNRNPC
ATOX1ENSG00000177556.7414.29630625.72050-0.594904.434803.56670HepG2HNRNPK
ATOX1ENSG00000177556.7148.12710276.51460-0.900504.127903.02770HepG2PABPC1
ATOX1ENSG00000177556.7391.42420611.02960-0.642504.752603.81830HepG2PABPC4
ATOX1ENSG00000177556.7524.34030632.35380-0.270201.918801.39780HepG2PCBP1
ATOX1ENSG00000177556.7498.12820643.43680-0.369303.122102.54800HepG2PTBP1
ATOX1ENSG00000177556.7510.65740344.868900.566205.673604.84860HepG2PUS1
ATOX1ENSG00000177556.7433.01260696.87260-0.686507.731806.76730HepG2QKI
ATOX1ENSG00000177556.7409.18010632.45110-0.628205.825304.87870HepG2RBM25
ATOX1ENSG00000177556.7501.98170666.92930-0.409903.600302.91020HepG2RECQL
ATOX1ENSG00000177556.7208.21460309.70860-0.572802.231601.51850HepG2RRP9
ATOX1ENSG00000177556.7495.57880291.672300.764705.247804.30100HepG2SF3A3
ATOX1ENSG00000177556.7466.29670669.91310-0.522705.375204.59720HepG2SF3B4
ATOX1ENSG00000177556.7126.26300218.85400-0.793502.882202.08410HepG2SNRNP70
ATOX1ENSG00000177556.7473.49300695.84770-0.555406.243905.57480HepG2SRFBP1
ATOX1ENSG00000177556.7391.93540568.86400-0.537505.575404.83920HepG2SRSF9
ATOX1ENSG00000177556.7483.70420620.79520-0.360002.963202.32420HepG2SUCLG1
ATOX1ENSG00000177556.7382.97100628.48950-0.714708.142407.26260HepG2TAF15
ATOX1ENSG00000177556.7406.02350577.51100-0.508304.224303.20030HepG2TIA1
ATOX1ENSG00000177556.7329.24210249.734800.398702.160801.61770HepG2UTP3
ATOX1ENSG00000177556.7175.42180290.99550-0.730203.055201.72640HepG2XRCC5
ATOX1ENSG00000177556.7585.06470397.593600.557203.951503.09210HepG2XRN2
ATOX1ENSG00000177556.7220.74000296.86740-0.427502.403701.77190HepG2ZC3H8
ATOX1ENSG00000177556.7399.99670284.486200.491503.915503.29560HepG2ZNF622
ATOX1ENSG00000177556.7558.49910336.794300.729608.004907.11020K562AGGF1
ATOX1ENSG00000177556.7521.95530370.059300.496103.346902.24350K562AKAP8
ATOX1ENSG00000177556.7594.28450350.443200.761907.215306.11750K562AKAP8L
ATOX1ENSG00000177556.7368.65490599.54990-0.701605.506304.72770K562AQR
ATOX1ENSG00000177556.7303.85260388.59120-0.354902.054601.47910K562DDX47
ATOX1ENSG00000177556.7138.32540241.58800-0.804503.877303.00730K562G3BP2
ATOX1ENSG00000177556.7137.33030245.96130-0.840804.765404.00260K562HNRNPC
ATOX1ENSG00000177556.7334.44040453.85890-0.440503.043902.10930K562HNRNPU
ATOX1ENSG00000177556.7342.67730212.882100.686702.250901.37600K562PABPN1
ATOX1ENSG00000177556.7447.12340343.717000.379402.292601.68090K562PTBP1
ATOX1ENSG00000177556.7633.50540347.590500.865908.626807.71670K562PUS1
ATOX1ENSG00000177556.7517.42050338.635600.611505.237004.44360K562RBM15
ATOX1ENSG00000177556.7475.93600346.744800.456802.732301.64720K562NELFE
ATOX1ENSG00000177556.7135.66290237.14190-0.805703.080401.51050K562TAF15
ATOX1ENSG00000177556.7535.89510710.29750-0.406503.130201.74720K562WRN
ATOX1ENSG00000177556.7491.33020675.44170-0.459103.535402.53770K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ATOX1 is not available on ENCORE database.





15 RBPs can affect the splicing of ATOX1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEATOX1ENSG00000177556.7chr5-1511333751511334551511312641511313401511381061511382100.137000.000810.01750includedK562SRSF1
SEATOX1ENSG00000177556.7chr5-151131264151131340151125839151126010151138106151138340-0.289000.000000.00000excludedK562SRSF1
SEATOX1ENSG00000177556.7chr5-151131264151131340151125839151126010151138106151138340-0.100000.000890.01905excludedK562SF3B4
SEATOX1ENSG00000177556.7chr5-1511312641511313401511258391511260101511381061511383400.085000.000230.09190includedK562SMNDC1
SEATOX1ENSG00000177556.7chr5-151131264151131340151125839151126010151138106151138340-0.087000.001660.05834excludedK562FXR1
SEATOX1ENSG00000177556.7chr5-151133375151133455151131264151131340151138106151138210-0.054000.000500.00954excludedK562PUS1
SEATOX1ENSG00000177556.7chr5-151131264151131340151125839151126010151138106151138340-0.111000.001310.06209excludedK562EFTUD2
SEATOX1ENSG00000177556.7chr5-151131264151131340151125839151126010151138106151138340-0.113000.000440.01167excludedK562U2AF1
SEATOX1ENSG00000177556.7chr5-151131264151131340151125839151126010151138106151138340-0.129000.000010.00280excludedK562RBM22
SEATOX1ENSG00000177556.7chr5-1511333751511334551511312641511313401511381061511382100.106000.000110.02550includedK562UPF1
SEATOX1ENSG00000177556.7chr5-151131264151131340151125839151126010151138106151138340-0.147000.000000.00014excludedK562HNRNPK
SEATOX1ENSG00000177556.7chr5-151131264151131340151125839151126010151138106151138340-0.336000.000000.00000excludedK562HNRNPC
A3SSATOX1ENSG00000177556.7chr5-1511312641511313741511312641511313401511381061511383400.081000.000000.00004longerK562AQR
A3SSATOX1ENSG00000177556.7chr5-1511223821511225591511223821511225201511258391511260100.064000.000000.00002longerK562AQR
MXEATOX1ENSG00000177556.7chr5-151125839151126010151131264151131340151122383151122520151138106151138210-0.223000.000000.000062includedK562SRSF1
MXEATOX1ENSG00000177556.7chr5-1511258391511260101511312641511313401511223831511225201511381061511382100.117000.001390.054241includedHepG2BCCIP
MXEATOX1ENSG00000177556.7chr5-1511258391511260101511312641511313401511223831511225201511381061511382100.163000.000010.000481includedHepG2DDX55
MXEATOX1ENSG00000177556.7chr5-1511258391511260101511312641511313401511223831511225201511381061511382100.124000.000880.033181includedHepG2SUPV3L1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ATOX1 is not avaliable on ENCORE database.