ALDH3A2

General Information

Gene Name : ALDH3A2
Gene ID : ENSG00000072210.18
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ALDH3A2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ALDH3A2	ENSG00000072210.18	18.37	16.59	17.48	ENCSR000AEF
HepG2	ALDH3A2	ENSG00000072210.18	88.14	111.76	99.95	ENCSR985KAT
K562	ALDH3A2	ENSG00000072210.18	0.17	0.17	0.17	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ALDH3A2 is not avaliable on ENCORE database.

Proteins bound to RNA

ALDH3A2 RNA is bound by 21 proteins.

CanvasJS.com

eCLIP assay for ALDH3A2 is not avaliable on ENCORE database.

21 proteins are bound to ALDH3A2 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	19575235	19575329	+	3'-UTR,CDS,intron-Distal,intron-Proximal	5.42110	28.67925	HepG2	PRPF8
chr17	19559863	19559944	+	5'-UTR,CDS,intron-Proximal	5.06022	19.05983	HepG2	PRPF8
chr17	19566679	19566768	+	3'-UTR,CDS	3.30062	15.25977	HepG2	BCLAF1
chr17	19555034	19555093	+	CDS,intron-Distal,intron-Proximal	4.15865	13.52135	HepG2	GRWD1
chr17	19579641	19579727	+	3'-UTR	3.55245	12.68856	HepG2	UPF1
chr17	19555061	19555131	+	CDS,intron-Distal,intron-Proximal	4.29254	12.49465	HepG2	PRPF8
chr17	19552312	19552402	+	5'-UTR,CDS,intron-Proximal	3.85297	11.40657	HepG2	DDX3X
chr17	19552408	19552487	+	CDS,intron-Proximal	3.32635	11.16074	HepG2	PRPF8
chr17	19556018	19556071	+	intron-Distal,intron-Proximal	4.44905	10.88507	HepG2	RBFOX2
chr17	19561111	19561176	+	5'-UTR,CDS,intron-Proximal	3.71869	10.68403	HepG2	BCLAF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 41 entries

eCLIP assay for ALDH3A2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ALDH3A2 is not available on ENCORE database.
109 RBPs can affect the levels of ALDH3A2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ALDH3A2 is not available on ENCORE database.

109 RBPs can affect the gene expression of ALDH3A2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ALDH3A2	ENSG00000072210.14	2211.19970	4004.81020	-0.85690	47.94660	46.39590	HepG2	ZNF622
ALDH3A2	ENSG00000072210.14	1735.19750	4997.34100	-1.52610	36.74490	34.43390	HepG2	G3BP1
ALDH3A2	ENSG00000072210.14	2436.72760	4666.08610	-0.93730	31.25690	28.94350	HepG2	NOL12
ALDH3A2	ENSG00000072210.14	1688.23190	3048.35750	-0.85250	30.33580	28.12970	HepG2	PARN
ALDH3A2	ENSG00000072210.14	2509.46640	4376.04400	-0.80220	28.01470	26.41770	HepG2	CELF1
ALDH3A2	ENSG00000072210.14	5118.75610	3369.39760	0.60320	25.76660	24.20290	HepG2	CKAP4
ALDH3A2	ENSG00000072210.14	2599.06870	6107.40250	-1.23260	23.20650	21.83370	HepG2	AKAP1
ALDH3A2	ENSG00000072210.14	5092.33380	3224.27780	0.65930	22.85930	21.36910	HepG2	DKC1
ALDH3A2	ENSG00000072210.14	2204.45400	3515.59930	-0.67330	22.80960	21.33690	HepG2	UTP3
ALDH3A2	ENSG00000072210.14	1883.23510	3019.16350	-0.68090	21.34020	19.95840	HepG2	TRIM56
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 109 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ALDH3A2 is not available on ENCORE database.

14 RBPs can affect the splicing of ALDH3A2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ALDH3A2	ENSG00000072210.14	chr17	+	19558593	19558700	19555859	19555945	19559678	19559887	0.05700	0.00000	0.00006	included	HepG2	U2AF1
SE	ALDH3A2	ENSG00000072210.14	chr17	+	19568260	19568360	19566645	19566812	19575033	19575269	-0.13000	0.00000	0.00000	excluded	HepG2	U2AF1
SE	ALDH3A2	ENSG00000072210.14	chr17	+	19558593	19558700	19555859	19555945	19559678	19559887	0.07500	0.00000	0.00007	included	HepG2	HNRNPM
SE	ALDH3A2	ENSG00000072210.14	chr17	+	19558593	19558700	19555859	19555945	19559678	19559887	0.07400	0.00000	0.00000	included	HepG2	QKI
SE	ALDH3A2	ENSG00000072210.14	chr17	+	19558593	19558700	19555859	19555945	19559678	19559887	0.10800	0.00000	0.00000	included	HepG2	U2AF2
SE	ALDH3A2	ENSG00000072210.14	chr17	+	19576463	19576588	19575033	19575269	19578808	19578812	0.44400	0.00000	0.00000	included	HepG2	HNRNPC
SE	ALDH3A2	ENSG00000072210.14	chr17	+	19558593	19558700	19555859	19555945	19559678	19559887	0.05800	0.00000	0.00004	included	HepG2	KHSRP
SE	ALDH3A2	ENSG00000072210.14	chr17	+	19576463	19576588	19575033	19575269	19578808	19578812	0.12100	0.00001	0.07532	included	HepG2	CSTF2T
SE	ALDH3A2	ENSG00000072210.14	chr17	+	19555859	19555945	19552090	19552437	19559678	19559705	-0.10500	0.00001	0.00029	excluded	HepG2	U2AF2
SE	ALDH3A2	ENSG00000072210.14	chr17	+	19576463	19576588	19575033	19575269	19578808	19578812	-0.13000	0.00003	0.00490	excluded	HepG2	PRPF8

Showing 1 to 10 of 19 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ALDH3A2

General Information

Functions

Localization

Domains (AlphaFold: ALDH3A2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ALDH3A2 is not avaliable on ENCORE database.

21 proteins are bound to ALDH3A2 RNA:

eCLIP assay for ALDH3A2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ALDH3A2 is not available on ENCORE database.

109 RBPs can affect the gene expression of ALDH3A2 :

The Knockdown/knockout RNA-Seq assay for ALDH3A2 is not available on ENCORE database.

14 RBPs can affect the splicing of ALDH3A2 :

The Knockdown/knockout RNA-Seq assay for ALDH3A2 is not avaliable on ENCORE database.