ZSWIM7

General Information

Gene Name       : ZSWIM7
Gene ID             : ENSG00000214941.7
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZSWIM7)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZSWIM7ENSG00000214941.77.074.755.91ENCSR000AEF
HepG2ZSWIM7ENSG00000214941.713.4811.5212.50ENCSR985KAT
K562ZSWIM7ENSG00000214941.77.194.996.09ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZSWIM7 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZSWIM7 RNA is bound by 1 proteins.  







eCLIP assay for ZSWIM7 is not avaliable on ENCORE database.





1 proteins are bound to ZSWIM7 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr171590284015902979-5'-UTR,CDS,intron-Distal,intron-Proximal5.814656.69401K562DDX3X
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZSWIM7 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZSWIM7 is not available on ENCORE database.

  • 17 RBPs can affect the levels of ZSWIM7.  








The Knockdown/knockout RNA-Seq assay for ZSWIM7 is not available on ENCORE database.





17 RBPs can affect the gene expression of ZSWIM7 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZSWIM7ENSG00000214941.3188.80620122.383200.625402.744901.97590HepG2CALR
ZSWIM7ENSG00000214941.3344.12730228.239700.592303.013402.36430HepG2DDX3X
ZSWIM7ENSG00000214941.3184.02380111.466000.723203.877303.02460HepG2ILF2
ZSWIM7ENSG00000214941.3303.61420216.400400.488402.045201.49640HepG2NCBP2
ZSWIM7ENSG00000214941.3441.07310218.410101.0139011.1533010.26420HepG2RBM22
ZSWIM7ENSG00000214941.3219.94920142.313400.628002.616301.83690HepG2RPS2
ZSWIM7ENSG00000214941.3202.03720127.458200.664502.094501.41810HepG2SNRNP70
ZSWIM7ENSG00000214941.3427.05900246.687200.791708.131007.39710HepG2SRFBP1
ZSWIM7ENSG00000214941.3141.68650217.36880-0.617402.937402.45380HepG2SRSF1
ZSWIM7ENSG00000214941.3287.26320214.184600.423402.219301.74780HepG2SSB
ZSWIM7ENSG00000214941.3268.93120195.373600.460902.179201.67100HepG2TAF15
ZSWIM7ENSG00000214941.3198.21900119.784700.726602.558101.59570HepG2UPF2
ZSWIM7ENSG00000214941.3196.98500128.778100.613102.050801.41870HepG2XRN2
ZSWIM7ENSG00000214941.3126.2099084.907100.571801.921901.34730HepG2ZC3H8
ZSWIM7ENSG00000214941.3121.3356079.622700.607701.834901.32200K562FXR1
ZSWIM7ENSG00000214941.3139.9584087.832700.672102.173001.35210K562HNRNPM
ZSWIM7ENSG00000214941.381.92520123.81350-0.595802.075001.33460K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZSWIM7 is not available on ENCORE database.





8 RBPs can affect the splicing of ZSWIM7 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZSWIM7ENSG00000214941.3chr17-158901131589020615884353158844581589057915890682-0.332000.000080.00251excludedK562SRSF1
SEZSWIM7ENSG00000214941.3chr17-1588355615883705158812761588147715884353158844580.185000.000190.00488includedHepG2U2AF1
SEZSWIM7ENSG00000214941.3chr17-158901131589020615884353158844581589057915890682-0.203000.001240.08566excludedHepG2TBRG4
SEZSWIM7ENSG00000214941.3chr17-1589417815894418158905791589068215897070158970920.194000.003390.03388includedK562AQR
SEZSWIM7ENSG00000214941.3chr17-1589011315890206158843531588445815890579158906820.827000.000370.07138includedK562GPKOW
SEZSWIM7ENSG00000214941.3chr17-158901131589020615884353158844581589057915890682-0.300000.002160.08865excludedK562EFTUD2
SEZSWIM7ENSG00000214941.3chr17-158901131589020615884353158844581589057915890682-0.119000.003080.06141excludedHepG2SRSF1
RIZSWIM7ENSG00000214941.3chr17-1588104015881477158810401588122715881357158814770.177000.009390.07274includedHepG2RBM22
MXEZSWIM7ENSG00000214941.3chr17-1588135715881477158843531588445815879873158804061589057915890682-0.245000.008180.053832includedK562AQR
MXEZSWIM7ENSG00000214941.3chr17-1588435315884458158901131589020615881040158814771589057915890682-0.246000.001080.034842includedK562EFTUD2
MXEZSWIM7ENSG00000214941.3chr17-1588435315884458158901131589020615881040158814771589057915890682-0.246000.001800.036612includedK562PRPF8

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZSWIM7 is not avaliable on ENCORE database.