VNN3

General Information

Gene Name       : VNN3
Gene ID             : ENSG00000093134.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: VNN3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878VNN3ENSG00000093134.140.170.150.16ENCSR000AEF
HepG2VNN3ENSG00000093134.140.000.000.00ENCSR985KAT
K562VNN3ENSG00000093134.140.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for VNN3 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on VNN3 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for VNN3 is not avaliable on ENCORE database.






NO known proteins are bound to VNN3 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for VNN3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for VNN3 is not available on ENCORE database.

  • 29 RBPs can affect the levels of VNN3.  








The Knockdown/knockout RNA-Seq assay for VNN3 is not available on ENCORE database.





29 RBPs can affect the gene expression of VNN3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
VNN3ENSG00000093134.912.910000.976303.725002.686802.09650HepG2BOP1
VNN3ENSG00000093134.913.538701.096603.625802.105401.42580HepG2CALR
VNN3ENSG00000093134.954.375300.896705.9221014.5631013.13380HepG2CPSF6
VNN3ENSG00000093134.919.852000.0000099999.999907.004305.90430HepG2DAZAP1
VNN3ENSG00000093134.917.135300.951604.170403.963402.43010HepG2DDX47
VNN3ENSG00000093134.98.461200.0000099999.999902.868202.20630HepG2DNAJC2
VNN3ENSG00000093134.927.394404.780202.518703.418602.76380HepG2EIF2S1
VNN3ENSG00000093134.969.355305.143303.753204.964204.05960HepG2EIF4B
VNN3ENSG00000093134.922.729000.0000099999.999907.488106.23270HepG2EIF4G1
VNN3ENSG00000093134.911.233100.0000099999.999903.677902.74690HepG2EIF4G2
VNN3ENSG00000093134.911.344500.296205.259103.161902.39860HepG2HNRNPF
VNN3ENSG00000093134.912.259100.291605.393503.388502.59370HepG2IGF2BP1
VNN3ENSG00000093134.932.690407.988002.032903.261501.70430HepG2NKRF
VNN3ENSG00000093134.947.402504.887503.277707.963606.75380HepG2PABPC4
VNN3ENSG00000093134.942.590502.551604.060906.997906.10510HepG2PCBP1
VNN3ENSG00000093134.925.908903.882502.738304.057503.33700HepG2PUS1
VNN3ENSG00000093134.922.675101.379704.038604.116803.26510HepG2RAVER1
VNN3ENSG00000093134.919.175802.551902.909603.135102.42220HepG2RBM25
VNN3ENSG00000093134.921.463700.536005.323504.067702.05250HepG2RBM39
VNN3ENSG00000093134.933.536200.320106.711009.266308.13420HepG2RPLP0
VNN3ENSG00000093134.944.909102.323904.272309.145907.72230HepG2RPS3A
VNN3ENSG00000093134.942.470200.961705.464608.357207.19260HepG2SF3B1
VNN3ENSG00000093134.931.260201.339204.544807.227304.82790HepG2SLTM
VNN3ENSG00000093134.929.809001.386304.426307.462705.84170HepG2SMNDC1
VNN3ENSG00000093134.931.219703.843003.022005.131504.50830HepG2SRFBP1
VNN3ENSG00000093134.929.629300.291306.668509.506108.34950HepG2SRSF7
VNN3ENSG00000093134.911.761402.296002.356701.813201.34900HepG2SRSF9
VNN3ENSG00000093134.922.013802.742403.004803.998402.87760HepG2SUPT6H
VNN3ENSG00000093134.928.123002.047403.779806.146305.41470HepG2ZNF622
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for VNN3 is not available on ENCORE database.






No RBPs affect the alternative splcing events of VNN3 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for VNN3 is not avaliable on ENCORE database.