RP4-614O4.11

General Information

Gene Name : RP4-614O4.11
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP4-614O4.11)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP4-614O4.11 is not avaliable on ENCORE database.

Proteins bound to RNA

RP4-614O4.11 RNA is bound by 28 proteins.

eCLIP assay for RP4-614O4.11 is not avaliable on ENCORE database.

28 proteins are bound to RP4-614O4.11 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr20	33865743	33865815	-	intron-Distal,intron-Proximal	6.22511	8.50915	HepG2	EFTUD2
chr20	33866946	33866989	-	3'-UTR,intron-Distal	3.01488	12.79046	HepG2	RPS3
chr20	33867446	33867505	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.39797	5.06049	HepG2	ZC3H11A
chr20	33867368	33867385	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.82685	5.82560	HepG2	PABPN1
chr20	33865691	33865801	-	intron-Distal,intron-Proximal	4.26112	4.96173	HepG2	U2AF1
chr20	33866862	33866941	-	3'-UTR,intron-Distal	4.05043	6.75470	HepG2	UPF1
chr20	33858893	33859028	-	intron-Distal	3.11137	3.47356	HepG2	HNRNPK
chr20	33859635	33859735	-	intron-Distal,intron-Proximal	4.18595	3.97489	K562	TIA1
chr20	33866147	33866196	-	intron-Distal	3.35888	3.84371	HepG2	HNRNPC
chr20	33867391	33867425	-	3'-UTR,CDS,intron-Distal	3.14878	4.81290	HepG2	DDX55
chr20	33867708	33867747	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.91724	13.19443	HepG2	AQR
chr20	33866973	33867043	-	3'-UTR,CDS,intron-Distal	3.92256	4.57180	HepG2	AQR
chr20	33866059	33866107	-	intron-Distal	4.37958	3.52477	K562	AKAP1
chr20	33867460	33867542	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.28074	10.99913	HepG2	LARP4
chr20	33867803	33867890	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.37409	10.63716	HepG2	G3BP1
chr20	33865385	33865481	-	intron-Distal	4.53570	12.48637	HepG2	DDX59
chr20	33865221	33865266	-	intron-Distal	4.18451	4.07750	HepG2	HNRNPK
chr20	33867520	33867610	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.46065	9.57673	HepG2	AQR
chr20	33867745	33867767	-	3'-UTR,CDS,intron-Distal	3.39765	10.17919	HepG2	PPIG
chr20	33867762	33867805	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.34520	6.22033	HepG2	RPS3
chr20	33866878	33866931	-	3'-UTR,intron-Distal	3.34396	7.22358	HepG2	PABPN1
chr20	33867506	33867544	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.76187	5.62335	HepG2	RPS3
chr20	33865729	33865791	-	intron-Distal,intron-Proximal	3.53821	11.79280	HepG2	SF3B4
chr20	33866899	33866965	-	3'-UTR,intron-Distal	3.95963	17.03008	K562	PABPC4
chr20	33865186	33865243	-	intron-Distal,intron-Proximal	4.06365	6.92152	K562	PABPC4
chr20	33866995	33867010	-	3'-UTR,CDS,intron-Distal	4.61434	5.58993	HepG2	PABPN1
chr20	33866748	33866787	-	3'-UTR,intron-Distal	6.18748	400.00000	K562	PABPC4
chr20	33866758	33866843	-	3'-UTR,intron-Distal	5.15713	15.18786	HepG2	SUB1
chr20	33867324	33867360	-	intron-Distal,intron-Proximal	5.67988	24.20385	HepG2	PRPF8
chr20	33867326	33867368	-	intron-Distal,intron-Proximal	5.10649	8.23509	HepG2	AQR
chr20	33866788	33866833	-	3'-UTR,intron-Distal	5.04175	78.75885	K562	PABPC4
chr20	33866754	33866881	-	3'-UTR,intron-Distal	3.37702	10.20708	HepG2	AKAP1
chr20	33865189	33865283	-	intron-Distal,intron-Proximal	3.32859	3.92922	HepG2	AKAP1
chr20	33867706	33867748	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.34098	9.68074	HepG2	EFTUD2
chr20	33867505	33867542	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.96661	7.76900	HepG2	PABPN1
chr20	33867704	33867757	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.61056	13.10719	HepG2	PRPF8
chr20	33866754	33866859	-	3'-UTR,intron-Distal	3.40942	30.46801	HepG2	DDX55
chr20	33867711	33867760	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.16960	12.19643	HepG2	BUD13
chr20	33866833	33866860	-	3'-UTR,intron-Distal	3.84961	8.40205	K562	PABPC4
chr20	33867791	33867830	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.91318	6.69987	K562	RPS3
chr20	33866791	33866865	-	3'-UTR,intron-Distal	4.49897	15.89240	HepG2	PABPN1
chr20	33867460	33867480	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.14359	5.11600	HepG2	RPS3
chr20	33866828	33866879	-	3'-UTR,intron-Distal	3.84157	17.61311	HepG2	LARP4
chr20	33867013	33867102	-	intron-Distal	3.86559	5.34167	HepG2	SF3B4
chr20	33866014	33866102	-	intron-Distal,intron-Proximal	3.52646	14.45403	HepG2	EFTUD2
chr20	33865385	33865462	-	intron-Distal	3.39149	5.44142	HepG2	PCBP2
chr20	33867542	33867589	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.76343	14.37547	HepG2	EFTUD2
chr20	33865402	33865510	-	intron-Distal	4.10368	20.03744	K562	PCBP1
chr20	33866751	33866814	-	3'-UTR,intron-Distal	3.71905	10.94252	K562	IGF2BP2
chr20	33865702	33865732	-	intron-Distal	4.10660	3.94390	HepG2	EFTUD2
chr20	33866758	33866791	-	3'-UTR,intron-Distal	3.86646	9.74915	HepG2	PABPN1
chr20	33865932	33865990	-	intron-Distal,intron-Proximal	4.01897	6.72825	HepG2	XRN2
chr20	33866741	33866826	-	3'-UTR,intron-Distal	4.48500	13.89495	HepG2	UPF1
chr20	33867385	33867433	-	3'-UTR,CDS,intron-Distal	3.22934	6.72814	HepG2	PABPN1
chr20	33867451	33867495	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.10538	7.55078	HepG2	PABPN1
chr20	33865925	33865973	-	5'-UTR,intron-Distal,intron-Proximal	4.62189	7.61488	HepG2	EFTUD2
chr20	33866942	33866989	-	3'-UTR,intron-Distal	4.52772	10.94373	K562	RPS3
chr20	33867252	33867358	-	intron-Distal,intron-Proximal	5.19658	21.60331	HepG2	EFTUD2
chr20	33867360	33867377	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.77278	15.49797	HepG2	PRPF8
chr20	33865779	33865841	-	intron-Distal,intron-Proximal	4.46972	4.69805	HepG2	NKRF
chr20	33867746	33867786	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.45008	8.80587	HepG2	GRWD1
chr20	33865952	33866039	-	intron-Distal,intron-Proximal	3.10718	3.56282	HepG2	AKAP1
chr20	33865202	33865276	-	intron-Distal	5.66875	14.58801	K562	PCBP1
chr20	33866757	33866828	-	3'-UTR,intron-Distal	4.51966	37.27041	HepG2	LARP4
chr20	33865371	33865461	-	intron-Distal	3.48404	6.19671	HepG2	HNRNPK
chr20	33865214	33865266	-	intron-Distal	3.40166	6.64741	HepG2	DDX59
chr20	33866034	33866106	-	intron-Distal	3.55983	7.05513	HepG2	FAM120A
chr20	33867805	33867915	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.49884	11.75294	HepG2	RPS3
chr20	33867285	33867369	-	intron-Distal,intron-Proximal	5.96921	11.65826	K562	AQR
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP4-614O4.11 is not avaliable on ENCORE database.

Summary

Diffrential Expression

The Knockdown/knockout assay for RP4-614O4.11 is not available on ENCORE database.
No RBPs affect the gene expression of RP4-614O4.11 on ENCORE database.

RP4-614O4.11

General Information

Functions

Localization

Domains (AlphaFold: RP4-614O4.11)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP4-614O4.11 is not avaliable on ENCORE database.

28 proteins are bound to RP4-614O4.11 RNA:

eCLIP assay for RP4-614O4.11 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP4-614O4.11 is not available on ENCORE database.

No RBPs affect the gene expression of RP4-614O4.11 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP4-614O4.11 is not available on ENCORE database.

No RBPs affect the alternative splcing events of RP4-614O4.11 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP4-614O4.11 is not avaliable on ENCORE database.