RP13-672B3.2

General Information

Gene Name : RP13-672B3.2
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP13-672B3.2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP13-672B3.2 is not avaliable on ENCORE database.

Proteins bound to RNA

RP13-672B3.2 RNA is bound by 16 proteins.

eCLIP assay for RP13-672B3.2 is not avaliable on ENCORE database.

16 proteins are bound to RP13-672B3.2 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr12	133266938	133267028	+	5'-UTR,CDS,intron-Proximal	3.55283	6.00776	K562	PRPF8
chr12	133266944	133266991	+	5'-UTR,CDS,intron-Proximal	4.27197	5.73990	HepG2	PRPF8
chr12	133266874	133266999	+	5'-UTR,CDS,intron-Proximal	3.30533	4.48818	HepG2	GRWD1
chr12	133266875	133267007	+	5'-UTR,CDS,intron-Proximal	3.87839	3.67596	K562	GRWD1
chr12	133266883	133267005	+	5'-UTR,CDS,intron-Proximal	5.09732	7.06060	HepG2	PPIG
chr12	133291473	133291553	+	5'-UTR,CDS	4.41780	5.79022	K562	YBX3
chr12	133291443	133291525	+	5'-UTR,CDS,intron-Proximal	5.27509	6.64872	K562	UPF1
chr12	133278070	133278126	+	intron-Distal	3.84653	4.32448	K562	PTBP1
chr12	133287564	133287654	+	CDS,intron-Distal,intron-Proximal	4.05391	4.24288	K562	UPF1
chr12	133271899	133272017	+	intron-Distal	4.37288	7.54030	K562	GEMIN5
chr12	133287469	133287654	+	CDS,intron-Distal,intron-Proximal	3.60844	3.50315	HepG2	UPF1
chr12	133268582	133268676	+	intron-Distal	6.49902	9.34483	K562	DHX30
chr12	133287679	133287800	+	5'-UTR,intron-Distal,intron-Proximal	3.93633	3.25414	K562	RBFOX2
chr12	133271880	133271967	+	intron-Distal	4.85489	4.52980	K562	DDX6
chr12	133287418	133287602	+	5'-UTR,CDS,intron-Distal	3.84542	5.59242	K562	DDX3X
chr12	133272194	133272271	+	intron-Distal	5.79498	11.76519	K562	DHX30
chr12	133271881	133271970	+	intron-Distal	6.49455	13.20578	K562	PHF6
chr12	133271898	133271977	+	intron-Distal	6.03339	20.94705	K562	DDX52
chr12	133271899	133271980	+	intron-Distal	5.92134	24.74848	K562	DHX30
chr12	133272135	133272184	+	intron-Distal	5.63090	15.28746	K562	DDX52
chr12	133272218	133272259	+	intron-Distal	3.87568	5.52511	K562	PHF6
chr12	133272184	133272276	+	intron-Distal	6.46107	26.84680	K562	DDX52
chr12	133271877	133271998	+	intron-Distal	4.99351	7.53307	K562	TBRG4
chr12	133272175	133272227	+	intron-Distal	4.51109	3.78860	K562	AKAP1
chr12	133287414	133287609	+	5'-UTR,CDS,intron-Distal	4.27371	34.23676	HepG2	DDX3X
chr12	133272122	133272190	+	intron-Distal	6.23093	10.53873	K562	PHF6
chr12	133268555	133268673	+	intron-Distal	4.17468	6.06724	K562	DDX52
chr12	133271911	133271983	+	intron-Distal	3.95978	3.19863	HepG2	EIF3D
chr12	133278009	133278129	+	intron-Distal,intron-Proximal	3.41098	3.34990	HepG2	PTBP1
chr12	133271894	133271982	+	intron-Distal	4.19707	4.13758	HepG2	AKAP1
chr12	133272115	133272170	+	intron-Distal	4.17351	4.02152	K562	TBRG4
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP13-672B3.2 is not avaliable on ENCORE database.

Summary
AS Affected by

Diffrential Expression

The Knockdown/knockout assay for RP13-672B3.2 is not available on ENCORE database.
No RBPs affect the gene expression of RP13-672B3.2 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP13-672B3.2 is not available on ENCORE database.

No RBPs affect the gene expression of RP13-672B3.2 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP13-672B3.2 is not available on ENCORE database.

7 RBPs can affect the splicing of RP13-672B3.2 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	RP13-672B3.2	ENSG00000256632.3	chr12	+	133277835	133277955			133266848	133266962	133281204	133281380	-0.16400	0.00093	0.01154	excluded	K562	AQR
SE	RP13-672B3.2	ENSG00000256632.3	chr12	+	133277835	133277955			133266848	133266962	133281204	133281380	0.20600	0.00135	0.04978	included	K562	FXR1
SE	RP13-672B3.2	ENSG00000256632.3	chr12	+	133277835	133277955			133266848	133266962	133281204	133281380	-0.13000	0.00625	0.07365	excluded	K562	PUS1
SE	RP13-672B3.2	ENSG00000256632.3	chr12	+	133272469	133272632			133266848	133266962	133277835	133277955	0.60200	0.00000	0.00004	included	HepG2	SFPQ
SE	RP13-672B3.2	ENSG00000256632.3	chr12	+	133272469	133272632			133266848	133266962	133277835	133277955	-0.19100	0.00052	0.07157	excluded	K562	LARP4
SE	RP13-672B3.2	ENSG00000256632.3	chr12	+	133272469	133272632			133266848	133266962	133277835	133277955	-0.18600	0.00083	0.05753	excluded	HepG2	HNRNPL
SE	RP13-672B3.2	ENSG00000256632.3	chr12	+	133272469	133272632			133266848	133266962	133281204	133281380	-0.19600	0.00207	0.06570	excluded	K562	HNRNPU
MXE	RP13-672B3.2	ENSG00000256632.3	chr12	+	133277835	133277955	133281204	133281380	133266848	133266962	133291443	133291498	-0.73000	0.00716	0.06253	2included	HepG2	SFPQ

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP13-672B3.2

General Information

Functions

Localization

Domains (AlphaFold: RP13-672B3.2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP13-672B3.2 is not avaliable on ENCORE database.

16 proteins are bound to RP13-672B3.2 RNA:

eCLIP assay for RP13-672B3.2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP13-672B3.2 is not available on ENCORE database.

No RBPs affect the gene expression of RP13-672B3.2 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP13-672B3.2 is not available on ENCORE database.

7 RBPs can affect the splicing of RP13-672B3.2 :

The Knockdown/knockout RNA-Seq assay for RP13-672B3.2 is not avaliable on ENCORE database.