RP11-390B4.5

General Information

Gene Name       : RP11-390B4.5
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RP11-390B4.5)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RP11-390B4.5 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on RP11-390B4.5 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for RP11-390B4.5 is not avaliable on ENCORE database.






NO known proteins are bound to RP11-390B4.5 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for RP11-390B4.5 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RP11-390B4.5 is not available on ENCORE database.

  • 25 RBPs can affect the levels of RP11-390B4.5.  








The Knockdown/knockout RNA-Seq assay for RP11-390B4.5 is not available on ENCORE database.





25 RBPs can affect the gene expression of RP11-390B4.5 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RP11-390B4.5ENSG00000260589.135.5705012.170801.547202.440901.83880HepG2EIF4A3
RP11-390B4.5ENSG00000260589.174.781509.967902.9072010.647607.33450HepG2EXOSC5
RP11-390B4.5ENSG00000260589.152.9246010.309102.359906.023903.54310HepG2EXOSC9
RP11-390B4.5ENSG00000260589.140.0539012.641201.663702.848302.20630HepG2NCBP2
RP11-390B4.5ENSG00000260589.119.0309041.21930-1.115001.901701.38970HepG2PUM1
RP11-390B4.5ENSG00000260589.147.7064016.297401.549402.589501.62450HepG2SRSF3
RP11-390B4.5ENSG00000260589.111.8829038.33990-1.690002.902502.26190HepG2SRSF5
RP11-390B4.5ENSG00000260589.114.5840043.59790-1.579902.997602.35470HepG2SUCLG1
RP11-390B4.5ENSG00000260589.140.75580121.86700-1.580207.475006.60770K562AGGF1
RP11-390B4.5ENSG00000260589.138.62240126.80390-1.715108.711207.48310K562AKAP8L
RP11-390B4.5ENSG00000260589.171.29780133.03970-0.899903.913602.81020K562ATP5C1
RP11-390B4.5ENSG00000260589.180.15110136.47700-0.767903.246402.28760K562DKC1
RP11-390B4.5ENSG00000260589.1101.3840052.905700.938203.284402.31270K562HNRNPU
RP11-390B4.5ENSG00000260589.190.23350134.58560-0.576802.123801.41210K562KIF1C
RP11-390B4.5ENSG00000260589.173.27980128.81940-0.813902.477401.47810K562MAK16
RP11-390B4.5ENSG00000260589.186.51880150.76780-0.801203.315502.30250K562MBNL1
RP11-390B4.5ENSG00000260589.135.1210079.95700-1.186903.380802.40900K562METAP2
RP11-390B4.5ENSG00000260589.146.56080105.67600-1.182503.427902.42430K562NAA15
RP11-390B4.5ENSG00000260589.1196.5954063.384501.632909.979508.40400K562PCBP3
RP11-390B4.5ENSG00000260589.1113.5290048.611401.223605.071103.98450K562POLR2G
RP11-390B4.5ENSG00000260589.174.1790035.504101.062902.742301.84220K562PSIP1
RP11-390B4.5ENSG00000260589.140.89070125.78540-1.621107.346706.50780K562PUS1
RP11-390B4.5ENSG00000260589.141.14890122.53340-1.574207.520406.57250K562RBM15
RP11-390B4.5ENSG00000260589.125.7233054.13010-1.073402.393101.61580K562RBM22
RP11-390B4.5ENSG00000260589.124.0998055.31520-1.198702.591501.90450K562SRSF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RP11-390B4.5 is not available on ENCORE database.






No RBPs affect the alternative splcing events of RP11-390B4.5 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RP11-390B4.5 is not avaliable on ENCORE database.