LRRD1

General Information

Gene Name : LRRD1
Gene ID : ENSG00000240720.8
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: LRRD1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	LRRD1	ENSG00000240720.8	0.10	0.01	0.06	ENCSR000AEF
HepG2	LRRD1	ENSG00000240720.8	0.02	0.03	0.03	ENCSR985KAT
K562	LRRD1	ENSG00000240720.8	0.01	0.00	0.01	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for LRRD1 is not avaliable on ENCORE database.

Proteins bound to RNA

LRRD1 RNA is bound by 28 proteins.

eCLIP assay for LRRD1 is not avaliable on ENCORE database.

28 proteins are bound to LRRD1 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr7	91744930	91744982	-	intron-Distal	4.74279	5.31529	HepG2	SUGP2
chr7	91743000	91743075	-	CDS,intron-Distal,intron-Proximal	3.11121	3.73623	K562	SND1
chr7	91763584	91763641	-	CDS,intron-Distal	4.48599	400.00000	HepG2	DDX3X
chr7	91756814	91756855	-	CDS,intron-Distal,intron-Proximal	3.36707	4.74886	HepG2	BCLAF1
chr7	91741939	91741974	-	3'-UTR,intron-Distal	3.03847	6.18673	K562	UPF1
chr7	91762973	91763004	-	intron-Distal	4.30482	4.48560	K562	EXOSC5
chr7	91746486	91746527	-	CDS,intron-Distal,intron-Proximal	3.07293	5.93614	HepG2	SND1
chr7	91760303	91760362	-	intron-Distal	4.05771	7.66911	K562	MATR3
chr7	91755566	91755593	-	CDS,intron-Distal,intron-Proximal	3.93597	5.56704	HepG2	SND1
chr7	91763221	91763246	-	intron-Distal	6.33699	19.38141	K562	HNRNPM
chr7	91755718	91755742	-	CDS,intron-Distal,intron-Proximal	4.37897	3.24875	K562	SND1
chr7	91759105	91759158	-	intron-Distal	4.00536	5.47496	K562	MATR3
chr7	91746392	91746481	-	CDS,intron-Distal,intron-Proximal	3.53994	5.03659	K562	SND1
chr7	91752502	91752547	-	CDS,intron-Distal	3.64381	8.84704	K562	YBX3
chr7	91744012	91744062	-	intron-Distal	3.77887	6.02877	HepG2	SUGP2
chr7	91744208	91744278	-	intron-Distal	3.59254	6.55984	HepG2	SUGP2
chr7	91755723	91755743	-	CDS,intron-Distal,intron-Proximal	3.49859	3.27569	HepG2	BCLAF1
chr7	91763447	91763471	-	intron-Distal	5.62663	6.77622	K562	HNRNPM
chr7	91743807	91743931	-	intron-Distal	3.32570	10.38673	HepG2	SUGP2
chr7	91763334	91763438	-	intron-Distal	3.10974	41.74856	K562	TIA1
chr7	91763009	91763054	-	intron-Distal	5.36693	8.49423	K562	HNRNPM
chr7	91762899	91762968	-	intron-Distal	3.20479	3.21470	K562	HNRNPUL1
chr7	91746357	91746384	-	CDS,intron-Distal,intron-Proximal	4.28236	7.02113	HepG2	RPS3
chr7	91759830	91759933	-	intron-Distal	3.41398	6.27819	K562	HNRNPL
chr7	91763112	91763160	-	intron-Distal	5.13176	12.24874	HepG2	HNRNPM
chr7	91748679	91748747	-	intron-Distal	4.04598	7.29258	HepG2	SUGP2
chr7	91763397	91763472	-	intron-Distal	4.10200	8.17180	K562	EXOSC5
chr7	91763588	91763681	-	5'-UTR,CDS,intron-Distal	3.10172	12.41777	K562	RPS3
chr7	91743684	91743736	-	intron-Distal	4.80691	6.62827	HepG2	SUGP2
chr7	91747907	91747958	-	CDS,intron-Distal,intron-Proximal	3.80168	4.89564	K562	GPKOW
chr7	91763646	91763679	-	CDS,intron-Distal	3.06011	5.13929	K562	RBM15
chr7	91763246	91763265	-	intron-Distal	7.01288	22.00073	K562	HNRNPM
chr7	91763265	91763354	-	intron-Distal	6.37678	32.60604	K562	HNRNPM
chr7	91756880	91756919	-	CDS,intron-Distal	3.73768	4.15748	K562	SND1
chr7	91741623	91741643	-	3'-UTR,intron-Distal	3.92544	11.11813	K562	LIN28B
chr7	91757648	91757837	-	intron-Distal	3.29152	17.62864	K562	AGGF1
chr7	91752496	91752629	-	CDS,intron-Distal	3.49282	10.51425	HepG2	LIN28B
chr7	91761322	91761400	-	intron-Distal	4.24241	4.23094	K562	TIA1
chr7	91755668	91755714	-	CDS,intron-Distal	3.98420	4.15748	K562	SND1
chr7	91759844	91759939	-	intron-Distal	3.10453	3.12105	HepG2	HNRNPL
chr7	91763485	91763562	-	CDS,intron-Distal	3.07027	10.23189	K562	RPS3
chr7	91761125	91761177	-	5'-UTR,CDS,intron-Distal	3.52754	16.73252	K562	YBX3
chr7	91763161	91763177	-	intron-Distal	5.05122	5.59281	K562	HNRNPM
chr7	91741616	91741661	-	3'-UTR,intron-Distal	4.71401	25.49987	HepG2	LIN28B
chr7	91744657	91744749	-	intron-Distal	3.90252	8.74865	HepG2	SUGP2
chr7	91743132	91743160	-	CDS,intron-Distal	4.36732	8.09380	HepG2	RPS3
chr7	91761108	91761174	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.76331	4.86114	K562	SND1
chr7	91752561	91752584	-	CDS,intron-Distal	3.48235	5.37252	K562	YBX3
chr7	91742432	91742457	-	3'-UTR,intron-Distal	3.39402	3.50315	HepG2	UPF1
chr7	91763177	91763209	-	intron-Distal	5.37071	9.95292	K562	HNRNPM
chr7	91762889	91762963	-	intron-Distal	4.19935	11.84913	K562	EXOSC5
chr7	91758193	91758282	-	CDS,intron-Distal,intron-Proximal	3.79516	9.29435	K562	SND1
chr7	91763366	91763376	-	intron-Distal	6.66931	18.89264	K562	HNRNPM
chr7	91756919	91756946	-	CDS,intron-Distal,intron-Proximal	3.24328	3.99218	K562	SND1
chr7	91742468	91742553	-	3'-UTR,intron-Distal	3.57893	28.02272	K562	UPF1
chr7	91763438	91763471	-	intron-Distal	4.78424	45.91725	K562	TIA1
chr7	91747909	91747983	-	CDS,intron-Distal,intron-Proximal	4.54163	8.25856	K562	SF3B4
chr7	91763065	91763082	-	intron-Distal	5.76825	8.56038	K562	HNRNPM
chr7	91752387	91752438	-	CDS,intron-Distal,intron-Proximal	3.58710	3.94787	K562	AQR
chr7	91761169	91761187	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.54539	6.17692	HepG2	RPS3
chr7	91746393	91746485	-	CDS,intron-Distal,intron-Proximal	4.47127	12.26362	HepG2	RPS3
chr7	91757719	91757855	-	intron-Distal	3.10069	6.94218	HepG2	HNRNPL
chr7	91763356	91763366	-	intron-Distal	6.27215	13.63542	K562	HNRNPM
chr7	91763364	91763431	-	intron-Distal	5.58876	20.55341	HepG2	HNRNPM
chr7	91763042	91763116	-	intron-Distal	3.42206	4.19275	K562	EXOSC5
chr7	91757578	91757629	-	intron-Distal	3.40718	4.70018	K562	AGGF1
chr7	91742491	91742554	-	3'-UTR,intron-Distal	3.58366	7.57869	HepG2	UPF1
chr7	91763104	91763161	-	intron-Distal	5.73884	17.65320	K562	HNRNPM
chr7	91741578	91741616	-	3'-UTR,intron-Distal	5.03474	23.74689	HepG2	LIN28B
chr7	91753127	91753177	-	CDS,intron-Distal,intron-Proximal	3.78350	4.82292	K562	U2AF2
chr7	91759158	91759220	-	intron-Distal	5.05046	8.82141	K562	MATR3
chr7	91763290	91763350	-	intron-Distal	4.97714	9.24251	HepG2	EFTUD2
chr7	91743478	91743532	-	intron-Distal	3.17609	5.10681	HepG2	SUGP2
chr7	91748332	91748360	-	intron-Distal	4.47503	4.28663	HepG2	SUGP2
chr7	91763376	91763388	-	intron-Distal	6.14607	18.11363	K562	HNRNPM
chr7	91758354	91758435	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.88791	6.67591	K562	SF3B4
chr7	91760615	91760659	-	intron-Distal	4.15223	3.98115	K562	MATR3
chr7	91763641	91763690	-	5'-UTR,CDS,intron-Distal	4.78443	400.00000	HepG2	DDX3X
chr7	91763423	91763447	-	intron-Distal	5.56821	9.99992	K562	HNRNPM
chr7	91746402	91746462	-	CDS,intron-Distal,intron-Proximal	4.99118	5.85174	HepG2	SND1
chr7	91758282	91758358	-	5'-UTR,CDS,intron-Distal	3.82311	7.46458	K562	SND1
chr7	91763587	91763689	-	5'-UTR,CDS,intron-Distal	4.53677	63.25973	HepG2	RPS3
chr7	91758187	91758264	-	CDS,intron-Distal,intron-Proximal	3.83773	4.78225	HepG2	ZNF800
chr7	91746481	91746527	-	CDS,intron-Distal,intron-Proximal	3.10616	3.23201	K562	SND1
chr7	91760505	91760545	-	intron-Distal	4.29004	4.49973	K562	MATR3
chr7	91763061	91763112	-	intron-Distal	6.14720	14.79964	HepG2	HNRNPM
chr7	91757692	91757845	-	intron-Distal	3.93148	13.37908	K562	HNRNPL
chr7	91744659	91744748	-	intron-Distal	3.94651	3.62025	K562	MATR3
chr7	91759125	91759217	-	intron-Distal	3.78106	5.06177	HepG2	SUGP2
chr7	91741585	91741623	-	3'-UTR,intron-Distal	4.54865	12.75223	K562	LIN28B
chr7	91763212	91763267	-	intron-Distal	6.65134	27.74599	HepG2	HNRNPM
chr7	91759319	91759389	-	intron-Distal	3.41707	5.97286	K562	MATR3
chr7	91741843	91741951	-	3'-UTR,intron-Distal	3.50617	7.53739	HepG2	UPF1
chr7	91744445	91744476	-	intron-Distal	3.99077	3.63454	HepG2	SUGP2
chr7	91763350	91763394	-	intron-Distal	5.62189	8.50915	HepG2	EFTUD2
chr7	91760285	91760366	-	intron-Distal	3.36089	6.59727	HepG2	SUGP2
chr7	91763437	91763459	-	intron-Distal	4.21938	3.62366	HepG2	HNRNPM
chr7	91742333	91742385	-	3'-UTR,intron-Distal	3.13215	15.04064	K562	UPF1
chr7	91755663	91755712	-	CDS,intron-Distal	3.42857	7.01246	HepG2	BCLAF1
chr7	91753130	91753169	-	CDS,intron-Distal,intron-Proximal	4.41254	7.65665	HepG2	SND1
chr7	91763054	91763065	-	intron-Distal	6.78309	9.48713	K562	HNRNPM
chr7	91761117	91761169	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.83546	10.17831	HepG2	RPS3
chr7	91750243	91750297	-	intron-Distal	3.11127	3.10640	HepG2	SUGP2
chr7	91763209	91763221	-	intron-Distal	6.10266	15.26304	K562	HNRNPM
chr7	91756866	91756914	-	CDS,intron-Distal	5.22830	7.73487	HepG2	BCLAF1
chr7	91749501	91749604	-	intron-Distal	3.18380	6.78929	HepG2	SUGP2
chr7	91755486	91755567	-	intron-Distal,intron-Proximal	3.05143	7.12014	K562	AQR
chr7	91748854	91748947	-	intron-Distal	5.09995	6.08869	K562	EXOSC5
chr7	91763415	91763423	-	intron-Distal	4.79938	7.32380	K562	HNRNPM
chr7	91763082	91763104	-	intron-Distal	5.83212	14.77102	K562	HNRNPM
chr7	91763142	91763208	-	intron-Distal	4.18775	6.41051	K562	EXOSC5
chr7	91759301	91759349	-	intron-Distal	3.35200	3.59523	HepG2	SUGP2
chr7	91763166	91763212	-	intron-Distal	4.95236	12.24874	HepG2	HNRNPM
chr7	91763693	91763741	-	5'-UTR,intron-Distal	3.63477	4.98411	K562	RBM15
chr7	91763005	91763057	-	intron-Distal	3.91068	8.93039	HepG2	HNRNPM
chr7	91763388	91763415	-	intron-Distal	5.91416	18.20824	K562	HNRNPM
chr7	91754410	91754463	-	intron-Distal	3.83166	3.61897	HepG2	HNRNPC
chr7	91763487	91763569	-	CDS,intron-Distal	3.91904	43.57504	HepG2	RPS3
chr7	91746356	91746392	-	CDS,intron-Distal,intron-Proximal	3.88587	3.07497	K562	SND1
chr7	91760369	91760458	-	intron-Distal	4.24699	3.97268	K562	PTBP1
chr7	91747919	91747968	-	CDS,intron-Distal,intron-Proximal	3.69158	3.94088	HepG2	QKI
chr7	91763616	91763701	-	5'-UTR,CDS,intron-Distal	3.16390	8.90059	K562	GEMIN5
chr7	91762981	91763020	-	intron-Distal	4.12765	3.80314	K562	CSTF2T
chr7	91763020	91763148	-	intron-Distal	3.20888	6.93757	K562	CSTF2T
chr7	91760467	91760482	-	intron-Distal	4.26729	3.47525	K562	MATR3
chr7	91763679	91763693	-	5'-UTR,intron-Distal	4.15976	6.70275	K562	RBM15
chr7	91742107	91742132	-	3'-UTR,intron-Distal	3.70149	6.40324	K562	UPF1
chr7	91752531	91752581	-	CDS,intron-Distal	3.80990	8.90316	HepG2	SND1
chr7	91742107	91742140	-	3'-UTR,intron-Distal	4.29697	3.70195	HepG2	UPF1
chr7	91742785	91742870	-	3'-UTR,intron-Distal,intron-Proximal	3.75256	3.81856	K562	IGF2BP1
chr7	91763268	91763324	-	intron-Distal	6.31993	21.81016	HepG2	HNRNPM
chr7	91763690	91763776	-	5'-UTR,intron-Distal	4.77484	87.63447	HepG2	DDX3X
chr7	91743951	91743985	-	intron-Distal	3.51495	4.57452	HepG2	SUGP2
chr7	91753141	91753168	-	CDS,intron-Distal,intron-Proximal	4.15659	5.96402	HepG2	RPS3
chr7	91750259	91750305	-	intron-Distal	3.09257	3.91933	K562	EXOSC5
chr7	91760362	91760467	-	intron-Distal	5.34873	22.01031	K562	MATR3
chr7	91752547	91752561	-	CDS,intron-Distal	3.51241	5.37252	K562	YBX3
chr7	91763486	91763548	-	CDS,intron-Distal	3.72741	53.30016	HepG2	DDX3X
chr7	91746355	91746382	-	CDS,intron-Distal,intron-Proximal	3.17556	4.76748	HepG2	SND1
chr7	91750108	91750152	-	intron-Distal	3.60667	7.26439	K562	EXOSC5
chr7	91760314	91760482	-	intron-Distal	5.85575	14.03089	HepG2	PTBP1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for LRRD1 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for LRRD1 is not available on ENCORE database.
1 RBPs can affect the levels of LRRD1.

The Knockdown/knockout RNA-Seq assay for LRRD1 is not available on ENCORE database.

1 RBPs can affect the gene expression of LRRD1 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
LRRD1	ENSG00000240720.3	9.05490	0.00000	99999.99990	2.31470	1.67500	HepG2	HNRNPC
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

LRRD1

General Information

Functions

Localization

Domains (AlphaFold: LRRD1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for LRRD1 is not avaliable on ENCORE database.

28 proteins are bound to LRRD1 RNA:

eCLIP assay for LRRD1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for LRRD1 is not available on ENCORE database.

1 RBPs can affect the gene expression of LRRD1 :

The Knockdown/knockout RNA-Seq assay for LRRD1 is not available on ENCORE database.

No RBPs affect the alternative splcing events of LRRD1 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for LRRD1 is not avaliable on ENCORE database.