HIST2H2AC

General Information

Gene Name       : HIST2H2AC
Gene ID             : ENSG00000184260.5
Essential Gene : No

Functions

Localization

Domains (AlphaFold: HIST2H2AC)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878HIST2H2ACENSG00000184260.50.000.100.05ENCSR000AEF
HepG2HIST2H2ACENSG00000184260.57.921.304.61ENCSR985KAT
K562HIST2H2ACENSG00000184260.50.460.190.33ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for HIST2H2AC is not avaliable on ENCORE database.



Proteins bound to RNA
  • HIST2H2AC RNA is bound by 9 proteins.  







eCLIP assay for HIST2H2AC is not avaliable on ENCORE database.





9 proteins are bound to HIST2H2AC RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1149858907149858959+3'-UTR,CDS10.94894174.14159K562SLBP
chr1149858804149858821+CDS4.4783343.76873K562YBX3
chr1149858824149858857+CDS3.429248.77778HepG2YBX3
chr1149858822149858828+CDS5.38860400.00000K562YBX3
chr1149858527149858567+CDS6.8039186.43575HepG2SUB1
chr1149858857149858871+CDS3.603127.79495HepG2YBX3
chr1149858658149858717+CDS3.7286113.48584K562LIN28B
chr1149858573149858682+CDS4.1052826.64797HepG2RPS3
chr1149858641149858669+CDS4.2522225.62897K562RPS3
chr1149858780149858875+CDS4.3120916.94827K562METAP2
chr1149858828149858847+CDS5.65459400.00000K562YBX3
chr1149858588149858665+CDS4.490883.02371K562EIF3G
chr1149858815149858850+CDS3.633479.41448HepG2SUB1
chr1149858847149858849+CDS5.68187400.00000K562YBX3
chr1149858874149858877+CDS5.0178335.33708K562YBX3
chr1149858544149858554+CDS3.752906.93069K562GEMIN5
chr1149858569149858641+CDS5.21836400.00000K562RPS3
chr1149858862149858873+CDS5.69610400.00000K562YBX3
chr1149858581149858633+CDS3.189075.59529K562PCBP1
chr1149858849149858862+CDS5.67455400.00000K562YBX3
chr1149858574149858598+CDS3.5623613.03891HepG2SUB1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for HIST2H2AC is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for HIST2H2AC is not available on ENCORE database.

  • 4 RBPs can affect the levels of HIST2H2AC.  








The Knockdown/knockout RNA-Seq assay for HIST2H2AC is not available on ENCORE database.





4 RBPs can affect the gene expression of HIST2H2AC :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
HIST2H2ACENSG00000184260.411.2273035.43860-1.658302.651401.83830HepG2LARP4
HIST2H2ACENSG00000184260.40.441409.54060-4.434101.890401.37380HepG2RPS19
HIST2H2ACENSG00000184260.40.7508011.52910-3.940702.311901.84040HepG2SRFBP1
HIST2H2ACENSG00000184260.40.578009.66770-4.063901.990101.36280HepG2TARDBP
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for HIST2H2AC is not available on ENCORE database.






No RBPs affect the alternative splcing events of HIST2H2AC on ENCORE database.





The Knockdown/knockout RNA-Seq assay for HIST2H2AC is not avaliable on ENCORE database.