AP000350.10

General Information

Gene Name : AP000350.10
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: AP000350.10)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for AP000350.10 is not avaliable on ENCORE database.

Proteins bound to RNA

AP000350.10 RNA is bound by 21 proteins.

eCLIP assay for AP000350.10 is not avaliable on ENCORE database.

21 proteins are bound to AP000350.10 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr22	24237333	24237347	+	3'-UTR	3.33736	15.18794	K562	PABPC4
chr22	24237293	24237301	+	3'-UTR	4.06607	87.61561	K562	YBX3
chr22	24237246	24237325	+	3'-UTR,CDS	3.52136	20.84710	K562	RPS3
chr22	24237246	24237264	+	3'-UTR,CDS	4.15506	400.00000	K562	YBX3
chr22	24237347	24237388	+	3'-UTR	4.00592	36.09298	K562	PABPC4
chr22	24237310	24237333	+	3'-UTR	3.34584	19.79194	K562	PABPC4
chr22	24237308	24237328	+	3'-UTR	4.24700	400.00000	HepG2	LARP4
chr22	24237328	24237381	+	3'-UTR	4.41388	400.00000	HepG2	LARP4
chr22	24237289	24237293	+	3'-UTR,CDS	4.13081	86.25232	K562	YBX3
chr22	24237280	24237289	+	3'-UTR,CDS	4.12556	400.00000	K562	YBX3
chr22	24237275	24237280	+	3'-UTR,CDS	4.16996	400.00000	K562	YBX3
chr22	24237140	24237252	+	3'-UTR,CDS,intron-Proximal	3.16397	17.37118	HepG2	PRPF8
chr22	24237255	24237337	+	3'-UTR,CDS	4.56921	58.49439	HepG2	RPS3
chr22	24237240	24237365	+	3'-UTR,CDS	4.17008	18.26451	K562	METAP2
chr22	24237299	24237348	+	3'-UTR	3.65249	31.86873	HepG2	DDX3X
chr22	24237264	24237275	+	3'-UTR,CDS	4.27004	400.00000	K562	YBX3
chr22	24237282	24237306	+	3'-UTR,CDS	4.09834	400.00000	HepG2	LARP4
chr22	24237271	24237277	+	3'-UTR,CDS	4.21334	400.00000	HepG2	LARP4
chr22	24237373	24237411	+	3'-UTR	3.24649	3.07411	K562	LIN28B
chr22	24237315	24237350	+	3'-UTR	3.23712	64.87144	K562	YBX3
chr22	24237301	24237309	+	3'-UTR	3.97801	65.63487	K562	YBX3
chr22	24237241	24237280	+	3'-UTR,CDS	3.17533	22.82151	K562	PABPC4
chr22	24237242	24237271	+	3'-UTR,CDS	4.32863	400.00000	HepG2	LARP4
chr22	24237277	24237282	+	3'-UTR,CDS	3.84680	85.71598	HepG2	LARP4
chr22	24237309	24237315	+	3'-UTR	3.65648	64.72212	K562	YBX3
chr22	24236979	24237014	+	CDS	3.54764	4.92959	K562	METAP2
chr22	24236972	24237006	+	CDS	4.25586	36.31640	K562	PABPC4
chr22	24236996	24237045	+	CDS	4.17980	53.13026	HepG2	DDX3X
chr22	24237089	24237131	+	CDS	3.03836	11.29283	K562	RPS3
chr22	24236970	24237033	+	CDS	5.27404	47.79164	HepG2	RPS3
chr22	24237156	24237239	+	CDS,intron-Proximal	3.46998	12.35537	HepG2	BUD13
chr22	24237045	24237076	+	CDS	3.97798	41.76000	HepG2	DDX3X
chr22	24210700	24210825	+	3'-UTR,CDS	3.77000	7.26626	HepG2	PPIG
chr22	24237166	24237243	+	CDS,intron-Proximal	4.40103	12.95349	HepG2	AQR
chr22	24236890	24237009	+	CDS,intron-Proximal	5.28251	16.85773	HepG2	AQR
chr22	24236988	24237021	+	CDS	3.15260	39.46913	K562	YBX3
chr22	24237081	24237123	+	CDS	4.46042	6.63665	K562	GEMIN5
chr22	24236972	24237000	+	CDS	3.85579	7.86389	K562	RPS3
chr22	24237235	24237246	+	CDS	3.75029	52.78118	K562	YBX3
chr22	24237087	24237118	+	CDS	3.63257	33.02386	HepG2	DDX3X
chr22	24237092	24237131	+	CDS	4.13930	65.58080	K562	PABPC4
chr22	24237095	24237126	+	CDS	5.18311	85.48657	HepG2	LARP4
chr22	24236958	24236990	+	CDS,intron-Proximal	3.05181	10.01462	K562	DDX55
chr22	24237014	24237044	+	CDS	4.31603	30.19367	K562	PABPC4
chr22	24236959	24236988	+	CDS	3.24997	35.36236	K562	YBX3
chr22	24237013	24237039	+	CDS	4.56053	68.17146	HepG2	LARP4
chr22	24236975	24236996	+	CDS	3.99787	33.61531	HepG2	DDX3X
chr22	24237039	24237077	+	CDS	4.45341	79.63127	HepG2	LARP4
chr22	24236994	24237013	+	CDS	4.59304	67.83280	HepG2	LARP4
chr22	24237080	24237128	+	CDS	5.42872	68.49791	HepG2	RPS3
chr22	24237130	24237166	+	CDS,intron-Proximal	4.20076	5.56912	HepG2	AQR
chr22	24237033	24237078	+	CDS	5.16542	43.49248	HepG2	RPS3
chr22	24236963	24236994	+	CDS	5.02227	58.78136	HepG2	LARP4
chr22	24219229	24219302	+	3'-UTR,CDS	4.02092	6.92541	HepG2	PPIG
chr22	24236959	24236979	+	CDS	3.31312	3.38491	K562	METAP2
chr22	24237082	24237095	+	CDS	4.86354	69.35846	HepG2	LARP4
chr22	24236686	24236763	+	CDS,intron-Distal	3.61615	54.08201	K562	PABPC4
chr22	24236588	24236625	+	5'-UTR,intron-Distal	3.54905	10.06892	K562	RPS3
chr22	24236719	24236766	+	CDS,intron-Distal	5.47187	74.22809	HepG2	RPS3
chr22	24236728	24236766	+	CDS,intron-Distal	3.22605	39.24057	K562	YBX3
chr22	24236678	24236762	+	CDS,intron-Distal	3.83590	400.00000	HepG2	DDX3X
chr22	24236838	24236936	+	intron-Distal,intron-Proximal	4.10144	12.15540	HepG2	PRPF4
chr22	24236667	24236716	+	CDS,intron-Distal	3.59450	400.00000	HepG2	LARP4
chr22	24236675	24236719	+	CDS,intron-Distal	4.03973	37.79242	HepG2	RPS3
chr22	24236591	24236616	+	5'-UTR,intron-Distal	3.61631	22.71992	K562	PABPC4
chr22	24236672	24236686	+	CDS,intron-Distal	3.71539	29.19411	K562	PABPC4
chr22	24236590	24236677	+	5'-UTR,CDS,intron-Distal	4.71587	400.00000	HepG2	DDX3X
chr22	24236716	24236768	+	CDS,intron-Distal	3.96058	61.35109	HepG2	LARP4
chr22	24236667	24236702	+	CDS,intron-Distal	3.65083	400.00000	K562	YBX3
chr22	24236773	24236826	+	intron-Distal,intron-Proximal	5.63394	8.72621	HepG2	PRPF8
chr22	24236594	24236637	+	5'-UTR,intron-Distal	3.62936	22.66488	HepG2	RPS3
chr22	24236585	24236656	+	5'-UTR,intron-Distal	3.02788	3.36075	K562	EIF3G
chr22	24236585	24236719	+	5'-UTR,CDS,intron-Distal	3.62080	400.00000	K562	DDX3X
chr22	24236706	24236768	+	CDS,intron-Distal	3.71000	24.53318	K562	RPS3
chr22	24236593	24236757	+	5'-UTR,CDS,intron-Distal	3.39647	34.89150	K562	DROSHA
chr22	24224579	24224650	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.81684	3.29554	HepG2	GTF2F1
chr22	24224658	24224767	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.21017	6.27478	HepG2	SRSF1
chr22	24225010	24225120	+	3'-UTR,CDS,intron-Distal,intron-Proximal	4.04065	13.83580	HepG2	PRPF8
chr22	24236719	24236760	+	CDS,intron-Distal	3.23179	33.00661	K562	DDX3X
chr22	24236702	24236720	+	CDS,intron-Distal	4.10237	81.13529	K562	YBX3
chr22	24236720	24236727	+	CDS,intron-Distal	3.09694	33.42214	K562	YBX3
chr22	24236643	24236672	+	5'-UTR,CDS,intron-Distal	4.06063	400.00000	K562	PABPC4
chr22	24236616	24236643	+	5'-UTR,intron-Distal	4.25956	81.37765	K562	PABPC4
chr22	24226039	24226109	+	3'-UTR,CDS,intron-Distal,intron-Proximal	4.24144	7.13970	HepG2	PRPF8
chr22	24226207	24226251	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.96465	5.05356	HepG2	PRPF8
chr22	24237154	24237226	+	intron-Proximal	3.92483	12.10572	HepG2	EFTUD2
chr22	24236861	24236942	+	intron-Proximal	3.66845	5.34167	HepG2	SF3B4
chr22	24236863	24236921	+	intron-Proximal	4.47301	5.10887	HepG2	FAM120A
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for AP000350.10 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for AP000350.10 is not available on ENCORE database.
2 RBPs can affect the levels of AP000350.10.

The Knockdown/knockout RNA-Seq assay for AP000350.10 is not available on ENCORE database.

2 RBPs can affect the gene expression of AP000350.10 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
AP000350.10	ENSG00000251357.4	7.43800	0.00000	99999.99990	1.94380	1.35210	HepG2	HNRNPK
AP000350.10	ENSG00000251357.4	7.58760	0.00000	99999.99990	2.05720	1.60520	HepG2	SRFBP1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

AP000350.10

General Information

Functions

Localization

Domains (AlphaFold: AP000350.10)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for AP000350.10 is not avaliable on ENCORE database.

21 proteins are bound to AP000350.10 RNA:

eCLIP assay for AP000350.10 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for AP000350.10 is not available on ENCORE database.

2 RBPs can affect the gene expression of AP000350.10 :

The Knockdown/knockout RNA-Seq assay for AP000350.10 is not available on ENCORE database.

No RBPs affect the alternative splcing events of AP000350.10 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for AP000350.10 is not avaliable on ENCORE database.