TXNL4A

General Information

Gene Name : TXNL4A
Gene ID : ENSG00000141759.14
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TXNL4A)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TXNL4A	ENSG00000141759.14	11.38	42.83	27.11	ENCSR000AEF
HepG2	TXNL4A	ENSG00000141759.14	101.76	83.32	92.54	ENCSR985KAT
K562	TXNL4A	ENSG00000141759.14	35.84	31.25	33.55	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TXNL4A is not avaliable on ENCORE database.

Proteins bound to RNA

TXNL4A RNA is bound by 17 proteins.

CanvasJS.com

eCLIP assay for TXNL4A is not avaliable on ENCORE database.

17 proteins are bound to TXNL4A RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr18	77748443	77748542	-	5'-UTR,intron-Distal,intron-Proximal	5.43937	400.00000	HepG2	DDX3X
chr18	77748381	77748443	-	5'-UTR,CDS,intron-Distal	6.06321	59.34036	HepG2	DDX3X
chr18	77748256	77748338	-	CDS,intron-Distal	4.85652	26.85189	HepG2	DDX3X
chr18	77733697	77733848	-	3'-UTR,CDS,intron-Distal	3.60231	18.98097	HepG2	LARP4
chr18	77748362	77748463	-	5'-UTR,CDS,intron-Distal	3.46176	14.56165	K562	DDX3X
chr18	77748338	77748381	-	CDS,intron-Distal	5.51536	14.54204	HepG2	DDX3X
chr18	77748250	77748362	-	CDS,intron-Distal	3.63940	12.63060	K562	DDX3X
chr18	77748317	77748496	-	5'-UTR,CDS,intron-Distal	5.69597	11.37564	K562	GEMIN5
chr18	77737596	77737682	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	4.54528	10.95110	K562	PABPC4
chr18	77733700	77733841	-	3'-UTR,CDS,intron-Distal	3.59481	9.66555	K562	UCHL5
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 27 entries

eCLIP assay for TXNL4A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TXNL4A is not available on ENCORE database.
70 RBPs can affect the levels of TXNL4A.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for TXNL4A is not available on ENCORE database.

70 RBPs can affect the gene expression of TXNL4A :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TXNL4A	ENSG00000141759.10	363.21090	1179.99020	-1.69990	67.56910	64.93940	HepG2	DAZAP1
TXNL4A	ENSG00000141759.10	186.47980	1001.41250	-2.42490	53.14290	50.41310	HepG2	G3BP1
TXNL4A	ENSG00000141759.10	331.00300	748.09840	-1.17640	13.39940	11.86100	HepG2	DDX55
TXNL4A	ENSG00000141759.10	681.15530	1272.44430	-0.90150	12.53960	11.42110	K562	AQR
TXNL4A	ENSG00000141759.10	573.88620	892.25630	-0.63670	11.10750	9.75140	K562	NSUN2
TXNL4A	ENSG00000141759.10	447.35770	817.05500	-0.86900	10.16730	8.47560	K562	FMR1
TXNL4A	ENSG00000141759.10	675.25130	1099.50810	-0.70340	9.91710	8.43480	HepG2	RBM15
TXNL4A	ENSG00000141759.10	702.30240	1064.23470	-0.59970	9.17980	8.29950	HepG2	PTBP1
TXNL4A	ENSG00000141759.10	631.00840	940.89670	-0.57640	8.96740	8.07450	HepG2	SRSF9
TXNL4A	ENSG00000141759.10	802.49470	1156.54760	-0.52730	8.04920	7.33950	HepG2	SRSF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 78 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TXNL4A is not available on ENCORE database.

37 RBPs can affect the splicing of TXNL4A :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	TXNL4A	ENSG00000141759.10	chr18	-	77736717	77736787	77733533	77733856	77737597	77737701	0.06700	0.00000	included	K562	SRSF1
SE	TXNL4A	ENSG00000141759.10	chr18	-	77737597	77737701	77732874	77733856	77748239	77748593	0.11900	0.00001	included	K562	FTO
SE	TXNL4A	ENSG00000141759.10	chr18	-	77737597	77737701	77732874	77733856	77748239	77748593	0.06900	0.00871	included	HepG2	BUD13
SE	TXNL4A	ENSG00000141759.10	chr18	-	77737597	77737701	77732874	77733856	77748239	77748593	0.08800	0.00000	included	HepG2	RBM22
SE	TXNL4A	ENSG00000141759.10	chr18	-	77737597	77737701	77732874	77733856	77748239	77748593	0.11100	0.00028	included	K562	WDR3
SE	TXNL4A	ENSG00000141759.10	chr18	-	77737597	77737701	77732874	77733856	77748239	77748593	0.12400	0.00000	included	K562	FMR1
SE	TXNL4A	ENSG00000141759.10	chr18	-	77746601	77746750	77737597	77737701	77748239	77748502	-0.07400	0.00000	excluded	HepG2	HNRNPK
SE	TXNL4A	ENSG00000141759.10	chr18	-	77737597	77737701	77732874	77733856	77748239	77748593	0.09100	0.00000	included	HepG2	DDX59
SE	TXNL4A	ENSG00000141759.10	chr18	-	77737597	77737701	77732874	77733856	77748239	77748593	0.07600	0.00000	included	HepG2	U2AF2
SE	TXNL4A	ENSG00000141759.10	chr18	-	77737597	77737701	77732874	77733856	77748239	77748593	0.11500	0.00006	included	K562	METAP2

Showing 1 to 10 of 43 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TXNL4A

General Information

Functions

Localization

Domains (AlphaFold: TXNL4A)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TXNL4A is not avaliable on ENCORE database.

17 proteins are bound to TXNL4A RNA:

eCLIP assay for TXNL4A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TXNL4A is not available on ENCORE database.

70 RBPs can affect the gene expression of TXNL4A :

The Knockdown/knockout RNA-Seq assay for TXNL4A is not available on ENCORE database.

37 RBPs can affect the splicing of TXNL4A :

The Knockdown/knockout RNA-Seq assay for TXNL4A is not avaliable on ENCORE database.