TRIM37

General Information

Gene Name : TRIM37
Gene ID : ENSG00000108395.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TRIM37)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TRIM37	ENSG00000108395.13	13.37	11.15	12.26	ENCSR000AEF
HepG2	TRIM37	ENSG00000108395.13	16.93	23.28	20.11	ENCSR985KAT
K562	TRIM37	ENSG00000108395.13	13.28	16.03	14.66	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TRIM37 is not avaliable on ENCORE database.

Proteins bound to RNA

TRIM37 RNA is bound by 11 proteins.

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eCLIP assay for TRIM37 is not avaliable on ENCORE database.

11 proteins are bound to TRIM37 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	57157113	57157225	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	5.33537	9.10017	HepG2	BCLAF1
chr17	57184001	57184109	-	5'-UTR,intron-Distal,intron-Proximal	4.31279	6.83552	HepG2	DDX3X
chr17	57125112	57125215	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.30170	6.65588	K562	AQR
chr17	57153035	57153124	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	4.15948	6.10653	K562	SF3B4
chr17	57125073	57125148	-	3'-UTR,CDS,intron-Distal	3.39740	6.09767	K562	UCHL5
chr17	57168630	57168743	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.24915	5.63851	K562	SF3B4
chr17	57165667	57165726	-	5'-UTR,CDS,intron-Distal	4.64436	5.44793	K562	ZNF622
chr17	57141632	57141728	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.75291	4.95247	K562	PRPF8
chr17	57119169	57119232	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.07367	4.94718	HepG2	PPIG
chr17	57119175	57119239	-	3'-UTR,CDS,intron-Distal	3.41182	4.85828	HepG2	BCLAF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 24 entries

eCLIP assay for TRIM37 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TRIM37 is not available on ENCORE database.
75 RBPs can affect the levels of TRIM37.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for TRIM37 is not available on ENCORE database.

75 RBPs can affect the gene expression of TRIM37 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TRIM37	ENSG00000108395.9	1424.06320	595.59030	1.25750	40.32230	38.97950	HepG2	SRSF1
TRIM37	ENSG00000108395.9	542.13090	1061.03900	-0.96880	21.60260	20.00060	HepG2	SRSF7
TRIM37	ENSG00000108395.9	1150.65940	609.95310	0.91560	19.30800	18.13060	HepG2	NELFE
TRIM37	ENSG00000108395.9	985.67540	535.39170	0.88040	15.93400	14.75300	HepG2	TAF15
TRIM37	ENSG00000108395.9	1099.39050	525.67850	1.06440	15.06710	13.42990	HepG2	CIRBP
TRIM37	ENSG00000108395.9	1280.20220	640.55510	0.99890	13.24980	11.97780	HepG2	DDX3X
TRIM37	ENSG00000108395.9	584.55360	1019.94100	-0.80310	11.18880	10.09900	HepG2	PUF60
TRIM37	ENSG00000108395.9	632.23020	977.88330	-0.62920	11.24470	9.98750	HepG2	SLBP
TRIM37	ENSG00000108395.9	685.54870	1079.98380	-0.65570	11.06380	9.75530	HepG2	HNRNPF
TRIM37	ENSG00000108395.9	1127.47190	1920.29380	-0.76820	10.79050	8.68240	K562	MSI2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 82 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TRIM37 is not available on ENCORE database.

10 RBPs can affect the splicing of TRIM37 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	TRIM37	ENSG00000108395.9	chr17	-	57078958	57079075			57076741	57076820	57089688	57089807	-0.24100	0.00000	0.00001	excluded	K562	AQR
A3SS	TRIM37	ENSG00000108395.9	chr17	-	57078958	57079102			57078958	57079075	57089688	57089807	0.25600	0.00000	0.00002	longer	K562	U2AF2
A3SS	TRIM37	ENSG00000108395.9	chr17	-	57078958	57079102			57078958	57079075	57089688	57089807	0.28900	0.00000	0.00000	longer	HepG2	U2AF2
A3SS	TRIM37	ENSG00000108395.9	chr17	-	57148183	57148369			57148183	57148308	57153007	57153070	0.21100	0.00000	0.00000	longer	K562	AQR
A3SS	TRIM37	ENSG00000108395.9	chr17	-	57125043	57125223			57125043	57125180	57126538	57126754	0.20200	0.00000	0.00000	longer	K562	AQR
MXE	TRIM37	ENSG00000108395.9	chr17	-	57078958	57079075	57089688	57089842	57076741	57076820	57092970	57093160	0.22000	0.00000	0.00001	1included	K562	AQR
MXE	TRIM37	ENSG00000108395.9	chr17	-	57078958	57079075	57089688	57089888	57076741	57076820	57092970	57093160	0.22400	0.00000	0.00001	1included	K562	AQR
SE	TRIM37	ENSG00000108395.9	chr17	-	57121034	57121278			57119173	57119259	57125043	57125180	0.11900	0.00001	0.00016	included	K562	AQR
MXE	TRIM37	ENSG00000108395.9	chr17	-	57089688	57089836	57092970	57093160	57075560	57076820	57094656	57094785	-0.25800	0.00002	0.00031	2included	K562	AQR
SE	TRIM37	ENSG00000108395.9	chr17	-	57078958	57079075			57076741	57076820	57089688	57089807	0.20600	0.00003	0.04094	included	K562	TRA2A

Showing 1 to 10 of 27 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TRIM37

General Information

Functions

Localization

Domains (AlphaFold: TRIM37)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TRIM37 is not avaliable on ENCORE database.

11 proteins are bound to TRIM37 RNA:

eCLIP assay for TRIM37 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TRIM37 is not available on ENCORE database.

75 RBPs can affect the gene expression of TRIM37 :

The Knockdown/knockout RNA-Seq assay for TRIM37 is not available on ENCORE database.

10 RBPs can affect the splicing of TRIM37 :

The Knockdown/knockout RNA-Seq assay for TRIM37 is not avaliable on ENCORE database.