TNKS

General Information

Gene Name : TNKS
Gene ID : ENSG00000173273.15
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TNKS)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TNKS	ENSG00000173273.15	7.47	6.95	7.21	ENCSR000AEF
HepG2	TNKS	ENSG00000173273.15	8.60	10.45	9.52	ENCSR985KAT
K562	TNKS	ENSG00000173273.15	8.05	8.12	8.09	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TNKS is not avaliable on ENCORE database.

Proteins bound to RNA

TNKS RNA is bound by 58 proteins.

CanvasJS.com

eCLIP assay for TNKS is not avaliable on ENCORE database.

58 proteins are bound to TNKS RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr8	9628500	9628579	+	intron-Distal	6.85944	400.00000	K562	DHX30
chr8	9629626	9629679	+	intron-Distal	10.31436	177.19116	K562	DHX30
chr8	9629745	9629793	+	intron-Distal,intron-Proximal	8.63395	161.72873	K562	DHX30
chr8	9629793	9629856	+	intron-Distal,intron-Proximal	8.89758	119.93926	K562	DHX30
chr8	9629747	9629791	+	intron-Distal,intron-Proximal	7.81809	112.24082	K562	DDX52
chr8	9629560	9629626	+	intron-Distal	9.50390	107.47468	K562	DHX30
chr8	9629683	9629747	+	intron-Distal	8.09192	90.48362	K562	DDX52
chr8	9629619	9629683	+	intron-Distal	9.01820	90.32503	K562	DDX52
chr8	9628478	9628583	+	intron-Distal	8.10737	88.57846	K562	DDX52
chr8	9628446	9628588	+	intron-Distal	7.78665	79.65000	K562	EFTUD2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 283 entries

eCLIP assay for TNKS is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TNKS is not available on ENCORE database.
100 RBPs can affect the levels of TNKS.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for TNKS is not available on ENCORE database.

100 RBPs can affect the gene expression of TNKS :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TNKS	ENSG00000173273.11	923.73420	1713.49940	-0.89140	26.64680	24.92210	HepG2	HNRNPU
TNKS	ENSG00000173273.11	1264.81020	2224.36220	-0.81450	21.72310	20.13780	K562	FXR1
TNKS	ENSG00000173273.11	1143.03110	1779.51830	-0.63860	18.20580	16.77640	HepG2	SMN1
TNKS	ENSG00000173273.11	1199.80940	1907.72080	-0.66900	16.71420	15.42590	HepG2	UTP3
TNKS	ENSG00000173273.11	1035.45500	2072.53050	-1.00110	16.81700	15.10910	HepG2	CIRBP
TNKS	ENSG00000173273.11	1212.65200	2108.40110	-0.79800	14.57810	12.80620	K562	GRSF1
TNKS	ENSG00000173273.11	1184.49130	2339.45830	-0.98190	13.98130	12.64250	HepG2	MATR3
TNKS	ENSG00000173273.11	1111.03060	1679.86770	-0.59640	12.88820	11.79580	HepG2	TRIM56
TNKS	ENSG00000173273.11	1599.98320	2238.69460	-0.48460	12.82500	11.74660	HepG2	PUM1
TNKS	ENSG00000173273.11	1294.76000	1846.61410	-0.51220	11.93730	10.75210	HepG2	CKAP4
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 112 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TNKS is not available on ENCORE database.

11 RBPs can affect the splicing of TNKS :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	TNKS	ENSG00000173273.11	chr8	+	9629878	9629933	9627640	9627772	9634159	9634546	0.22400	0.00000	0.00002	included	HepG2	U2AF1
A3SS	TNKS	ENSG00000173273.11	chr8	+	9622209	9622300	9622225	9622300	9620656	9620754	0.21400	0.00000	0.00000	longer	K562	AQR
SE	TNKS	ENSG00000173273.11	chr8	+	9629878	9629933	9627640	9627772	9634159	9634546	-0.18600	0.00001	0.07532	excluded	HepG2	CSTF2T
SE	TNKS	ENSG00000173273.11	chr8	+	9629878	9629933	9627640	9627772	9634159	9634546	-0.14500	0.00004	0.05175	excluded	K562	ZRANB2
SE	TNKS	ENSG00000173273.11	chr8	+	9590788	9590954	9584150	9584230	9592374	9592594	-0.31900	0.00006	0.00198	excluded	K562	SF3B4
SE	TNKS	ENSG00000173273.11	chr8	+	9629878	9629933	9627640	9627772	9634159	9634546	0.25100	0.00008	0.02800	included	HepG2	EIF3D
SE	TNKS	ENSG00000173273.11	chr8	+	9565880	9566002	9564320	9564507	9567464	9567556	-0.05900	0.00027	0.00560	excluded	K562	PUS1
SE	TNKS	ENSG00000173273.11	chr8	+	9629878	9629933	9627640	9627772	9634159	9634546	0.15700	0.00060	0.04560	included	HepG2	HNRNPL
SE	TNKS	ENSG00000173273.11	chr8	+	9590788	9590954	9584150	9584230	9592374	9592594	-0.11500	0.00264	0.03779	excluded	K562	PUS1
SE	TNKS	ENSG00000173273.11	chr8	+	9602341	9602469	9592886	9592996	9605533	9605722	0.06000	0.00372	0.07087	included	HepG2	SRSF1

Showing 1 to 10 of 15 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TNKS

General Information

Functions

Localization

Domains (AlphaFold: TNKS)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TNKS is not avaliable on ENCORE database.

58 proteins are bound to TNKS RNA:

eCLIP assay for TNKS is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TNKS is not available on ENCORE database.

100 RBPs can affect the gene expression of TNKS :

The Knockdown/knockout RNA-Seq assay for TNKS is not available on ENCORE database.

11 RBPs can affect the splicing of TNKS :

The Knockdown/knockout RNA-Seq assay for TNKS is not avaliable on ENCORE database.