RBP | Antibody Info | Primary-HepG2 | Secondary-HepG2 | Primary-K562 | Secondary-K562 | Primary-UBERON | Primary-Hela |
---|
Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
---|---|---|---|---|---|---|---|---|
chr5 | 60456996 | 60457055 | - | 3'-UTR,5'-UTR,intron-Distal,intron-Proximal | 4.92957 | 39.62434 | K562 | PUM2 |
chr5 | 60458080 | 60458278 | - | 5'-UTR,intron-Distal,intron-Proximal | 4.11914 | 23.51144 | K562 | DDX3X |
chr5 | 60458043 | 60458265 | - | 5'-UTR,intron-Distal,intron-Proximal | 4.76353 | 22.72633 | HepG2 | DDX3X |
chr5 | 60456938 | 60457002 | - | 3'-UTR,5'-UTR,intron-Distal | 4.07242 | 12.32818 | K562 | YBX3 |
chr5 | 60458043 | 60458081 | - | 5'-UTR,intron-Distal,intron-Proximal | 5.11329 | 11.82794 | K562 | PUM2 |
chr5 | 60458132 | 60458273 | - | 5'-UTR,intron-Distal,intron-Proximal | 4.93714 | 7.22444 | HepG2 | NCBP2 |
chr5 | 60458043 | 60458080 | - | 5'-UTR,intron-Distal,intron-Proximal | 3.61570 | 6.73521 | K562 | DDX3X |
chr5 | 60456976 | 60457043 | - | 3'-UTR,5'-UTR,intron-Distal | 3.03395 | 5.96481 | K562 | DDX3X |
chr5 | 60453772 | 60453843 | - | 3'-UTR,intron-Distal | 4.43616 | 5.29390 | K562 | TARDBP |
chr5 | 60458149 | 60458229 | - | 5'-UTR,intron-Distal,intron-Proximal | 4.79886 | 5.00258 | K562 | FTO |
Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) * | -log(pval) ** | -log(padj) ** | Cell Line | Affected by RBP | Bound by RBP |
---|---|---|---|---|---|---|---|---|---|
SMIM15 | ENSG00000188725.3 | 310.95610 | 674.66560 | -1.11750 | 19.58030 | 17.83410 | HepG2 | ILF2 | |
SMIM15 | ENSG00000188725.3 | 1228.06610 | 1792.55080 | -0.54560 | 12.48890 | 11.06270 | K562 | NSUN2 | |
SMIM15 | ENSG00000188725.3 | 698.17020 | 1402.22660 | -1.00610 | 11.46900 | 9.85650 | K562 | CPSF6 | |
SMIM15 | ENSG00000188725.3 | 1689.15950 | 1119.47280 | 0.59340 | 10.88970 | 9.77560 | K562 | FXR1 | |
SMIM15 | ENSG00000188725.3 | 652.54750 | 1113.25360 | -0.77060 | 10.56750 | 9.46250 | K562 | HNRNPC | |
SMIM15 | ENSG00000188725.3 | 450.09750 | 863.18180 | -0.93940 | 11.92010 | 9.40400 | K562 | SRFBP1 | |
SMIM15 | ENSG00000188725.3 | 1371.32240 | 865.82520 | 0.66330 | 10.20520 | 8.62390 | K562 | SYNCRIP | |
SMIM15 | ENSG00000188725.3 | 610.19370 | 1019.79090 | -0.74090 | 9.05540 | 7.12590 | K562 | TRIM56 | |
SMIM15 | ENSG00000188725.3 | 754.22450 | 1338.82370 | -0.82790 | 8.32530 | 6.94100 | K562 | GPKOW | |
SMIM15 | ENSG00000188725.3 | 1038.99810 | 2099.77730 | -1.01500 | 8.65230 | 6.74650 | K562 | CNOT7 | |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) | -log(pval) | -log(padj) | Cell Line | Affected by RBP | Bound by RBP |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
Event Type | Gene Name | Gene ID | chr | Strand | ExonStart | ExonEnd | 2ndExonStart | 2ndExonEnd | upstreamES | upstreamEE | downstreamES | downstreamEE | dPSI | p-value | FDR | is_included | Cell Line | Affected by RBP | Bound by RBP |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SE | SMIM15 | ENSG00000188725.3 | chr5 | - | 60458043 | 60458186 | 60456914 | 60457054 | 60458272 | 60458295 | 0.08900 | 0.00000 | 0.00091 | included | K562 | ABCF1 | |||
SE | SMIM15 | ENSG00000188725.3 | chr5 | - | 60458043 | 60458186 | 60456914 | 60457054 | 60458272 | 60458295 | -0.08100 | 0.00000 | 0.00306 | excluded | K562 | APOBEC3C | |||
SE | SMIM15 | ENSG00000188725.3 | chr5 | - | 60458043 | 60458186 | 60456914 | 60457054 | 60458272 | 60458295 | -0.06300 | 0.00002 | 0.01295 | excluded | K562 | PUM1 | |||
SE | SMIM15 | ENSG00000188725.3 | chr5 | - | 60458043 | 60458186 | 60456914 | 60457054 | 60458272 | 60458295 | -0.20300 | 0.00011 | 0.00654 | excluded | K562 | PRPF8 | |||
SE | SMIM15 | ENSG00000188725.3 | chr5 | - | 60458043 | 60458186 | 60456914 | 60457054 | 60458272 | 60458295 | -0.07100 | 0.00702 | 0.09008 | excluded | K562 | HNRNPC |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".