SLC22A31

General Information

Gene Name : SLC22A31
Gene ID : ENSG00000259803.6
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: SLC22A31)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	SLC22A31	ENSG00000259803.6	0.00	0.01	0.01	ENCSR000AEF
HepG2	SLC22A31	ENSG00000259803.6	60.18	13.70	36.94	ENCSR985KAT
K562	SLC22A31	ENSG00000259803.6	0.34	0.24	0.29	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for SLC22A31 is not avaliable on ENCORE database.

Proteins bound to RNA

SLC22A31 RNA is bound by 33 proteins.

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eCLIP assay for SLC22A31 is not avaliable on ENCORE database.

33 proteins are bound to SLC22A31 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr16	89265375	89265441	-	CDS,intron-Distal,intron-Proximal	4.32136	400.00000	HepG2	PRPF8
chr16	89265733	89265828	-	CDS,intron-Distal,intron-Proximal	3.36570	86.62262	HepG2	PRPF8
chr16	89267989	89268044	-	CDS,intron-Distal	4.52673	63.77806	HepG2	DDX3X
chr16	89263817	89263879	-	intron-Distal,intron-Proximal	4.45845	56.30832	HepG2	SF3A3
chr16	89265150	89265209	-	CDS,intron-Distal,intron-Proximal	3.95121	53.03401	HepG2	PPIG
chr16	89265395	89265435	-	CDS,intron-Distal,intron-Proximal	4.20700	46.05390	HepG2	PPIG
chr16	89265213	89265278	-	intron-Distal,intron-Proximal	3.00952	44.11638	HepG2	PPIG
chr16	89265090	89265122	-	CDS,intron-Distal	5.10322	42.80688	HepG2	PPIG
chr16	89264849	89264865	-	CDS,intron-Distal,intron-Proximal	4.47168	41.84884	HepG2	PPIG
chr16	89264865	89264915	-	CDS,intron-Distal	3.60929	40.55829	HepG2	PPIG
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 114 entries

eCLIP assay for SLC22A31 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for SLC22A31 is not available on ENCORE database.
71 RBPs can affect the levels of SLC22A31.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for SLC22A31 is not available on ENCORE database.

71 RBPs can affect the gene expression of SLC22A31 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SLC22A31	ENSG00000259803.2	1221.98350	310.50810	1.97640	85.88890	83.27310	HepG2	SAFB2
SLC22A31	ENSG00000259803.2	500.12440	1262.40120	-1.33580	47.01140	45.26810	HepG2	ACO1
SLC22A31	ENSG00000259803.2	583.39590	1285.83210	-1.14020	36.56850	34.81620	HepG2	PUS1
SLC22A31	ENSG00000259803.2	830.68720	310.99290	1.41730	33.35830	31.06410	HepG2	PPIL4
SLC22A31	ENSG00000259803.2	733.30400	309.83070	1.24280	30.24360	28.32660	HepG2	DNAJC2
SLC22A31	ENSG00000259803.2	463.79740	1035.86010	-1.15930	28.03990	26.43500	HepG2	UTP3
SLC22A31	ENSG00000259803.2	420.46260	864.54740	-1.04000	20.14330	19.11430	HepG2	SRSF1
SLC22A31	ENSG00000259803.2	683.96120	1180.00480	-0.78680	19.80470	18.67120	HepG2	ZNF622
SLC22A31	ENSG00000259803.2	652.52590	210.38100	1.63290	19.36250	17.33540	HepG2	RPS3A
SLC22A31	ENSG00000259803.2	670.30900	318.33310	1.07420	17.49210	15.12820	HepG2	YBX3
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 73 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for SLC22A31 is not available on ENCORE database.

5 RBPs can affect the splicing of SLC22A31 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A3SS	SLC22A31	ENSG00000259803.2	chr16	-	89265059	89265245	89265059	89265205	89265430	89265599	0.28100	0.00000	0.00051	longer	HepG2	HNRNPK
A3SS	SLC22A31	ENSG00000259803.2	chr16	-	89265820	89265997	89265820	89265975	89266120	89266529	0.24000	0.00000	0.00001	longer	HepG2	HNRNPK
A3SS	SLC22A31	ENSG00000259803.2	chr16	-	89265512	89265684	89265512	89265599	89265820	89265975	0.16100	0.00001	0.00405	longer	HepG2	PCBP1
A3SS	SLC22A31	ENSG00000259803.2	chr16	-	89262558	89262713	89262558	89262631	89263705	89263817	0.66300	0.00004	0.06859	longer	HepG2	NOL12
A3SS	SLC22A31	ENSG00000259803.2	chr16	-	89265059	89265245	89265059	89265205	89265430	89265631	0.27300	0.00006	0.00735	longer	HepG2	SF3B4
A3SS	SLC22A31	ENSG00000259803.2	chr16	-	89264529	89264762	89264529	89264744	89264849	89264958	0.08200	0.00012	0.01469	longer	HepG2	HNRNPK
A3SS	SLC22A31	ENSG00000259803.2	chr16	-	89264529	89264762	89264529	89264744	89264849	89264958	-0.07000	0.00051	0.05151	shorter	HepG2	SRSF1

Showing 1 to 7 of 7 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

SLC22A31

General Information

Functions

Localization

Domains (AlphaFold: SLC22A31)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for SLC22A31 is not avaliable on ENCORE database.

33 proteins are bound to SLC22A31 RNA:

eCLIP assay for SLC22A31 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for SLC22A31 is not available on ENCORE database.

71 RBPs can affect the gene expression of SLC22A31 :

The Knockdown/knockout RNA-Seq assay for SLC22A31 is not available on ENCORE database.

5 RBPs can affect the splicing of SLC22A31 :

The Knockdown/knockout RNA-Seq assay for SLC22A31 is not avaliable on ENCORE database.