OCEL1

General Information

Gene Name : OCEL1
Gene ID : ENSG00000099330.8
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: OCEL1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	OCEL1	ENSG00000099330.8	6.27	5.03	5.65	ENCSR000AEF
HepG2	OCEL1	ENSG00000099330.8	11.09	11.61	11.35	ENCSR985KAT
K562	OCEL1	ENSG00000099330.8	19.53	12.64	16.09	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for OCEL1 is not avaliable on ENCORE database.

Proteins bound to RNA

OCEL1 RNA is bound by 1 proteins.

CanvasJS.com

eCLIP assay for OCEL1 is not avaliable on ENCORE database.

1 proteins are bound to OCEL1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr19	17338630	17338661	+	CDS,intron-Distal,intron-Proximal	4.22479	8.47823	HepG2	XPO5
chr19	17338614	17338630	+	intron-Distal,intron-Proximal	5.47647	7.42650	HepG2	XPO5
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 2 of 2 entries

eCLIP assay for OCEL1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for OCEL1 is not available on ENCORE database.
77 RBPs can affect the levels of OCEL1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for OCEL1 is not available on ENCORE database.

77 RBPs can affect the gene expression of OCEL1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
OCEL1	ENSG00000099330.4	129.65090	425.97600	-1.71610	25.73380	24.61010	HepG2	SRSF1
OCEL1	ENSG00000099330.4	191.32970	382.86130	-1.00080	10.42860	9.45120	HepG2	TAF15
OCEL1	ENSG00000099330.4	259.58940	125.32300	1.05050	8.92770	7.87230	HepG2	SAFB2
OCEL1	ENSG00000099330.4	432.64750	153.00320	1.49950	6.83060	5.85250	HepG2	GPKOW
OCEL1	ENSG00000099330.4	240.37310	395.54950	-0.71860	6.51000	5.83030	HepG2	SRFBP1
OCEL1	ENSG00000099330.4	378.91590	146.01870	1.37560	6.65330	5.72310	HepG2	HNRNPLL
OCEL1	ENSG00000099330.4	236.55680	391.97400	-0.72860	6.46100	5.69340	HepG2	PTBP1
OCEL1	ENSG00000099330.4	272.62320	441.77070	-0.69640	6.55060	5.60760	K562	DDX47
OCEL1	ENSG00000099330.4	249.55160	402.42330	-0.68940	6.67600	5.41490	K562	WDR43
OCEL1	ENSG00000099330.4	542.48500	325.08880	0.73860	6.66700	5.16800	K562	ATP5C1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 85 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for OCEL1 is not available on ENCORE database.

19 RBPs can affect the splicing of OCEL1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	OCEL1	ENSG00000099330.4	chr19	+	17338648	17338814			17337802	17338008	17339064	17339118	-0.27300	0.00000	0.00070	excluded	HepG2	SRSF9
RI	OCEL1	ENSG00000099330.4	chr19	+	17337501	17338008			17337501	17337678	17337802	17338008	-0.29800	0.00000	0.00003	excluded	K562	GPKOW
RI	OCEL1	ENSG00000099330.4	chr19	+	17337501	17338008			17337501	17337678	17337802	17338008	0.60900	0.00000	0.00001	included	K562	FXR1
MXE	OCEL1	ENSG00000099330.4	chr19	+	17337501	17338008	17339064	17339118	17337051	17337125	17339611	17340011	0.28500	0.00000	0.00003	1included	HepG2	MATR3
MXE	OCEL1	ENSG00000099330.4	chr19	+	17337501	17338008	17339064	17339118	17337051	17337125	17339611	17340011	0.28800	0.00000	0.00000	1included	HepG2	NCBP2
SE	OCEL1	ENSG00000099330.4	chr19	+	17339611	17339724			17339062	17339118	17339817	17340024	-0.57000	0.00001	0.00037	excluded	HepG2	U2AF2
A3SS	OCEL1	ENSG00000099330.4	chr19	+	17339611	17340028			17339817	17340028	17339064	17339118	-0.57000	0.00001	0.00078	shorter	HepG2	U2AF2
RI	OCEL1	ENSG00000099330.4	chr19	+	17337501	17338008			17337501	17337678	17337802	17338008	0.61100	0.00001	0.00207	included	K562	NCBP2
SE	OCEL1	ENSG00000099330.4	chr19	+	17338648	17338814			17337802	17338008	17339064	17339118	-0.23400	0.00002	0.00087	excluded	HepG2	HNRNPK
SE	OCEL1	ENSG00000099330.4	chr19	+	17338648	17338814			17337802	17338008	17339064	17339118	-0.29500	0.00005	0.00327	excluded	K562	FXR1

Showing 1 to 10 of 26 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

OCEL1

General Information

Functions

Localization

Domains (AlphaFold: OCEL1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for OCEL1 is not avaliable on ENCORE database.

1 proteins are bound to OCEL1 RNA:

eCLIP assay for OCEL1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for OCEL1 is not available on ENCORE database.

77 RBPs can affect the gene expression of OCEL1 :

The Knockdown/knockout RNA-Seq assay for OCEL1 is not available on ENCORE database.

19 RBPs can affect the splicing of OCEL1 :

The Knockdown/knockout RNA-Seq assay for OCEL1 is not avaliable on ENCORE database.