NT5C

General Information

Gene Name : NT5C
Gene ID : ENSG00000125458.6
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: NT5C)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	NT5C	ENSG00000125458.6	6.54	16.50	11.52	ENCSR000AEF
HepG2	NT5C	ENSG00000125458.6	41.84	22.56	32.20	ENCSR985KAT
K562	NT5C	ENSG00000125458.6	29.04	20.88	24.96	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for NT5C is not avaliable on ENCORE database.

Proteins bound to RNA

NT5C RNA is bound by 18 proteins.

eCLIP assay for NT5C is not avaliable on ENCORE database.

18 proteins are bound to NT5C RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	73126406	73126527	-	3'-UTR,intron-Distal,intron-Proximal	4.06817	3.08342	HepG2	AKAP1
chr17	73126496	73126553	-	3'-UTR,intron-Distal,intron-Proximal	3.95837	5.82560	HepG2	PABPN1
chr17	73126339	73126373	-	3'-UTR,intron-Distal,intron-Proximal	7.19005	16.57425	K562	PABPC4
chr17	73126438	73126492	-	3'-UTR,intron-Distal,intron-Proximal	4.25909	3.99014	HepG2	PABPN1
chr17	73126848	73126897	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.59642	9.74663	HepG2	PPIG
chr17	73126362	73126484	-	3'-UTR,intron-Distal,intron-Proximal	4.17150	6.88182	HepG2	LARP4
chr17	73126410	73126494	-	3'-UTR,intron-Distal,intron-Proximal	3.70178	4.51056	HepG2	LSM11
chr17	73126392	73126496	-	3'-UTR,intron-Distal,intron-Proximal	4.70065	6.52213	HepG2	UPF1
chr17	73126932	73126963	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.17368	8.06490	HepG2	PPIG
chr17	73127754	73127845	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.00043	7.38342	HepG2	NCBP2
chr17	73127273	73127343	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.70415	15.19414	HepG2	SRSF1
chr17	73127278	73127337	-	5'-UTR,CDS,intron-Distal,intron-Proximal	5.20864	15.63780	HepG2	PPIG
chr17	73127294	73127343	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.31606	3.34231	K562	RBM15
chr17	73127385	73127456	-	5'-UTR,intron-Distal,intron-Proximal	5.02207	4.94135	HepG2	RBM5
chr17	73127379	73127468	-	5'-UTR,intron-Distal,intron-Proximal	4.73233	34.23751	HepG2	SF3B4
chr17	73127374	73127416	-	5'-UTR,CDS,intron-Distal,intron-Proximal	5.46318	19.58297	HepG2	SF3A3
chr17	73127716	73127813	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.85106	6.42088	HepG2	SRSF1
chr17	73127734	73127819	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.40244	5.63105	K562	DDX3X
chr17	73127184	73127294	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.14423	15.01680	HepG2	PRPF8
chr17	73127657	73127716	-	CDS,intron-Distal,intron-Proximal	3.11918	5.71745	HepG2	SRSF1
chr17	73127578	73127643	-	CDS,intron-Distal,intron-Proximal	3.54670	6.66908	HepG2	PRPF8
chr17	73127119	73127172	-	CDS,intron-Distal,intron-Proximal	3.86927	6.87708	HepG2	EFTUD2
chr17	73127593	73127638	-	CDS,intron-Distal,intron-Proximal	4.85447	4.62947	HepG2	AQR
chr17	73127644	73127750	-	CDS,intron-Distal,intron-Proximal	4.44960	10.03600	HepG2	GRWD1
chr17	73127200	73127247	-	intron-Distal,intron-Proximal	4.06920	6.86590	K562	SF3B4
chr17	73127201	73127253	-	intron-Distal,intron-Proximal	4.52292	10.18833	HepG2	EFTUD2
chr17	73127209	73127250	-	intron-Distal,intron-Proximal	3.50876	8.78215	HepG2	SF3B4
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for NT5C is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for NT5C is not available on ENCORE database.
57 RBPs can affect the levels of NT5C.

The Knockdown/knockout RNA-Seq assay for NT5C is not available on ENCORE database.

57 RBPs can affect the gene expression of NT5C :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
NT5C	ENSG00000125458.2	281.01300	170.62820	0.71970	2.99320	2.01450	HepG2	BCCIP
NT5C	ENSG00000125458.2	326.65540	206.05160	0.66470	2.31370	1.67700	HepG2	CPSF6
NT5C	ENSG00000125458.2	310.00950	212.03360	0.54790	2.39040	1.53120	HepG2	EEF2
NT5C	ENSG00000125458.2	185.76710	264.48040	-0.50970	2.64190	1.50270	HepG2	EIF2S2
NT5C	ENSG00000125458.2	310.59970	220.08290	0.49690	2.12020	1.55740	HepG2	EIF4A3
NT5C	ENSG00000125458.2	210.93830	294.62290	-0.48200	2.51220	1.70650	HepG2	EIF4G1
NT5C	ENSG00000125458.2	313.51970	222.13160	0.49700	2.25880	1.63130	HepG2	FXR1
NT5C	ENSG00000125458.2	227.12670	327.80610	-0.52930	2.64320	1.94170	HepG2	HNRNPF
NT5C	ENSG00000125458.2	375.62140	272.00310	0.46560	3.38030	2.64170	HepG2	HNRNPL
NT5C	ENSG00000125458.2	242.94480	181.18170	0.42310	1.98640	1.46310	HepG2	HNRNPU
NT5C	ENSG00000125458.2	229.98990	138.21510	0.73460	3.38940	2.04640	HepG2	KHDRBS1
NT5C	ENSG00000125458.2	227.13460	151.31110	0.58590	2.36420	1.32030	HepG2	LARP7
NT5C	ENSG00000125458.2	397.50060	222.20950	0.83890	5.78720	4.85020	HepG2	MAGOH
NT5C	ENSG00000125458.2	447.35970	296.10370	0.59520	4.98360	3.96370	HepG2	NOL12
NT5C	ENSG00000125458.2	246.04470	179.34120	0.45610	2.18900	1.42770	HepG2	PARN
NT5C	ENSG00000125458.2	248.46170	161.59990	0.62050	3.61770	2.78640	HepG2	PPIL4
NT5C	ENSG00000125458.2	416.30440	300.07050	0.47220	3.87980	3.20320	HepG2	PUM1
NT5C	ENSG00000125458.2	337.89030	182.46270	0.88890	5.57510	4.15230	HepG2	RBM27
NT5C	ENSG00000125458.2	323.48780	242.41470	0.41610	2.23720	1.74050	HepG2	NELFE
NT5C	ENSG00000125458.2	299.72890	225.80290	0.40850	2.10740	1.55990	HepG2	RECQL
NT5C	ENSG00000125458.2	273.49510	168.26840	0.70070	3.29230	2.41940	HepG2	RPS2
NT5C	ENSG00000125458.2	299.54570	171.77690	0.80210	4.41830	3.04420	HepG2	RPS5
NT5C	ENSG00000125458.2	282.69400	161.35140	0.80890	6.33210	5.41720	HepG2	SAFB2
NT5C	ENSG00000125458.2	319.96500	188.16490	0.76580	6.49980	5.57990	HepG2	SMN1
NT5C	ENSG00000125458.2	232.34640	155.56750	0.57860	2.35740	1.48030	HepG2	SMNDC1
NT5C	ENSG00000125458.2	149.34630	236.70400	-0.66440	3.21640	2.71650	HepG2	SRSF1
NT5C	ENSG00000125458.2	455.04090	317.40570	0.51960	4.51170	3.75270	HepG2	SUCLG1
NT5C	ENSG00000125458.2	151.28960	212.79460	-0.49210	1.97510	1.48770	HepG2	TAF15
NT5C	ENSG00000125458.2	246.20320	177.62520	0.47090	2.41290	1.87900	HepG2	TRIM56
NT5C	ENSG00000125458.2	284.39930	152.89900	0.89520	3.93240	2.72560	HepG2	UPF2
NT5C	ENSG00000125458.2	421.72050	289.73090	0.54150	4.16570	3.45490	HepG2	UTP3
NT5C	ENSG00000125458.2	231.42720	130.45900	0.82690	4.02350	2.69710	HepG2	XPO5
NT5C	ENSG00000125458.2	306.23900	164.39560	0.89740	4.82590	3.87820	HepG2	XRN2
NT5C	ENSG00000125458.2	172.52090	243.32300	-0.49610	2.50440	1.86020	HepG2	ZC3H8
NT5C	ENSG00000125458.2	369.12670	655.71800	-0.82900	7.22830	6.35160	K562	AQR
NT5C	ENSG00000125458.2	851.40520	609.13010	0.48300	4.05650	3.28810	K562	DDX47
NT5C	ENSG00000125458.2	343.65310	496.01830	-0.52940	4.46060	3.57480	K562	EIF2S2
NT5C	ENSG00000125458.2	477.21510	325.92710	0.55000	3.78430	2.82810	K562	EIF4A3
NT5C	ENSG00000125458.2	387.48480	288.34750	0.42620	2.26150	1.49480	K562	FIP1L1
NT5C	ENSG00000125458.2	23.83740	123.72480	-2.37580	12.28930	10.57900	K562	G3BP2
NT5C	ENSG00000125458.2	950.92810	661.00330	0.52460	4.93190	3.92500	K562	GRSF1
NT5C	ENSG00000125458.2	238.43540	431.14340	-0.85460	7.37830	6.44960	K562	HNRNPC
NT5C	ENSG00000125458.2	376.84900	237.18360	0.66790	3.30010	2.27520	K562	HNRNPM
NT5C	ENSG00000125458.2	546.40320	390.91880	0.48300	3.12310	2.28020	K562	HSPD1
NT5C	ENSG00000125458.2	323.68470	520.41680	-0.68510	3.12810	1.60330	K562	ILF2
NT5C	ENSG00000125458.2	273.93350	417.91500	-0.60940	3.71490	2.04970	K562	LARP7
NT5C	ENSG00000125458.2	360.82350	207.08360	0.80100	3.06010	2.17530	K562	MAGOH
NT5C	ENSG00000125458.2	366.49000	206.63130	0.82660	7.03140	5.46920	K562	MATR3
NT5C	ENSG00000125458.2	234.00970	325.48730	-0.47600	2.51280	1.34460	K562	NCBP2
NT5C	ENSG00000125458.2	515.62380	638.53000	-0.30840	2.49870	1.78560	K562	NSUN2
NT5C	ENSG00000125458.2	343.69230	547.56880	-0.67190	3.61540	2.18670	K562	PABPC1
NT5C	ENSG00000125458.2	322.63600	444.24540	-0.46140	2.33420	1.57050	K562	PCBP3
NT5C	ENSG00000125458.2	253.03260	340.74270	-0.42940	2.22960	1.51010	K562	POLR2G
NT5C	ENSG00000125458.2	550.50000	327.35120	0.74980	6.81870	5.43040	K562	PPIG
NT5C	ENSG00000125458.2	361.91560	201.21060	0.84680	7.45450	6.40130	K562	PTBP1
NT5C	ENSG00000125458.2	285.20000	192.82100	0.56460	2.52650	1.72640	K562	RBM22
NT5C	ENSG00000125458.2	52.56890	121.44830	-1.20810	4.03750	2.13310	K562	TAF15
NT5C	ENSG00000125458.2	429.68060	199.60610	1.10600	11.04790	9.47730	K562	TARDBP
NT5C	ENSG00000125458.2	368.86470	192.55610	0.93770	5.80780	4.55510	K562	TIA1
NT5C	ENSG00000125458.2	237.89410	371.82550	-0.64430	3.63710	2.55990	K562	TIAL1
NT5C	ENSG00000125458.2	303.53570	189.07630	0.68280	3.23210	2.03590	K562	TRA2A
NT5C	ENSG00000125458.2	296.76820	395.22140	-0.41330	2.12580	1.31220	K562	TRIM56
NT5C	ENSG00000125458.2	78.31720	123.83990	-0.66110	2.23660	1.51540	K562	U2AF2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for NT5C is not available on ENCORE database.

10 RBPs can affect the splicing of NT5C :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	NT5C	ENSG00000125458.2	chr17	-	73127139	73127200	73126847	73126962	73127275	73127376	-0.11300	0.00016	0.00409	excluded	K562	HNRNPC
A5SS	NT5C	ENSG00000125458.2	chr17	-	73127059	73127376	73127139	73127376	73126847	73126962	0.11900	0.00008	0.00473	longer	K562	PUS1
A5SS	NT5C	ENSG00000125458.2	chr17	-	73127059	73127376	73127139	73127376	73126847	73126962	0.13500	0.00284	0.04518	longer	K562	AQR
A5SS	NT5C	ENSG00000125458.2	chr17	-	73127059	73127376	73127139	73127376	73126847	73126962	0.18200	0.00127	0.08761	longer	HepG2	RBM22
A5SS	NT5C	ENSG00000125458.2	chr17	-	73127059	73127376	73127139	73127376	73126847	73126962	0.25600	0.00014	0.01693	longer	HepG2	SF3B4
A5SS	NT5C	ENSG00000125458.2	chr17	-	73127059	73127376	73127139	73127376	73126847	73126962	0.18900	0.00001	0.00163	longer	K562	HNRNPC
A5SS	NT5C	ENSG00000125458.2	chr17	-	73127139	73127376	73127275	73127376	73126847	73126962	-0.23900	0.00003	0.00403	shorter	K562	HNRNPC
A5SS	NT5C	ENSG00000125458.2	chr17	-	73127059	73127376	73127139	73127376	73126847	73126962	0.11700	0.00020	0.02280	longer	K562	RBM15
A5SS	NT5C	ENSG00000125458.2	chr17	-	73127059	73127376	73127139	73127376	73126847	73126962	0.32300	0.00081	0.04691	longer	K562	U2AF2
A5SS	NT5C	ENSG00000125458.2	chr17	-	73127059	73127376	73127139	73127376	73126847	73126962	0.10300	0.00058	0.05287	longer	K562	UTP18
RI	NT5C	ENSG00000125458.2	chr17	-	73127147	73127353	73127147	73127200	73127275	73127353	-0.08100	0.00136	0.06997	excluded	K562	DROSHA
RI	NT5C	ENSG00000125458.2	chr17	-	73127147	73127353	73127147	73127200	73127275	73127353	0.19100	0.00098	0.01218	included	K562	EFTUD2
RI	NT5C	ENSG00000125458.2	chr17	-	73127147	73127353	73127147	73127200	73127275	73127353	0.16800	0.00054	0.00386	included	K562	AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

NT5C

General Information

Functions

Localization

Domains (AlphaFold: NT5C)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for NT5C is not avaliable on ENCORE database.

18 proteins are bound to NT5C RNA:

eCLIP assay for NT5C is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for NT5C is not available on ENCORE database.

57 RBPs can affect the gene expression of NT5C :

The Knockdown/knockout RNA-Seq assay for NT5C is not available on ENCORE database.

10 RBPs can affect the splicing of NT5C :

The Knockdown/knockout RNA-Seq assay for NT5C is not avaliable on ENCORE database.