MRPL4

General Information

Gene Name : MRPL4
Gene ID : ENSG00000105364.13
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: MRPL4)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	MRPL4	ENSG00000105364.13	6.00	30.22	18.11	ENCSR000AEF
HepG2	MRPL4	ENSG00000105364.13	89.98	18.75	54.37	ENCSR985KAT
K562	MRPL4	ENSG00000105364.13	110.49	47.89	79.19	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for MRPL4 is not avaliable on ENCORE database.

Proteins bound to RNA

MRPL4 RNA is bound by 19 proteins.

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eCLIP assay for MRPL4 is not avaliable on ENCORE database.

19 proteins are bound to MRPL4 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr19	10370475	10370596	+	3'-UTR,CDS	3.80340	22.58411	K562	PABPC4
chr19	10370378	10370549	+	3'-UTR,CDS	3.10786	21.86059	K562	DDX55
chr19	10362930	10362987	+	5'-UTR,CDS,intron-Proximal	5.13790	18.61638	K562	DDX3X
chr19	10369168	10369199	+	3'-UTR,CDS,intron-Proximal	4.08807	15.41209	K562	YBX3
chr19	10362892	10362986	+	5'-UTR,CDS	5.67220	15.31047	HepG2	DDX3X
chr19	10370364	10370503	+	3'-UTR,CDS	4.61022	14.32541	HepG2	PCBP2
chr19	10369158	10369168	+	3'-UTR,CDS	3.99635	13.50128	K562	YBX3
chr19	10369339	10369396	+	3'-UTR,CDS,intron-Proximal	3.97015	12.79935	HepG2	PRPF8
chr19	10370476	10370582	+	3'-UTR,CDS	4.02818	11.72056	HepG2	LARP4
chr19	10368933	10368980	+	3'-UTR,CDS	3.46399	11.24658	K562	YBX3
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 41 entries

eCLIP assay for MRPL4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for MRPL4 is not available on ENCORE database.
116 RBPs can affect the levels of MRPL4.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for MRPL4 is not available on ENCORE database.

116 RBPs can affect the gene expression of MRPL4 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
MRPL4	ENSG00000105364.9	186.22460	597.26120	-1.68130	32.00300	30.37170	HepG2	TAF15
MRPL4	ENSG00000105364.9	582.29640	257.04140	1.17970	20.72740	19.36560	HepG2	TRIM56
MRPL4	ENSG00000105364.9	887.08930	482.54830	0.87830	20.08660	18.78590	HepG2	PUM1
MRPL4	ENSG00000105364.9	1713.23670	2689.32790	-0.65050	19.40210	17.68810	K562	UPF1
MRPL4	ENSG00000105364.9	2584.41040	1610.85360	0.68190	18.83790	17.47950	K562	AGGF1
MRPL4	ENSG00000105364.9	447.93200	176.40820	1.34430	18.64430	16.24640	K562	SF3B4
MRPL4	ENSG00000105364.9	504.53930	233.48930	1.11150	17.09600	15.69060	HepG2	SAFB2
MRPL4	ENSG00000105364.9	481.44130	232.95520	1.04720	16.26920	14.81570	HepG2	DNAJC2
MRPL4	ENSG00000105364.9	913.68750	472.10380	0.95250	15.66740	14.15300	K562	PTBP1
MRPL4	ENSG00000105364.9	1065.64400	451.81510	1.23780	15.24140	13.20290	K562	TIA1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 131 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for MRPL4 is not available on ENCORE database.

2 RBPs can affect the splicing of MRPL4 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	is_included	Cell Line	Affected by RBP
SE	MRPL4	ENSG00000105364.9	chr19	+	10369847	10370083	10369284	10369361	10370292	10370454	0.15800	included	HepG2	HNRNPK
SE	MRPL4	ENSG00000105364.9	chr19	+	10369847	10370083	10369284	10369361	10370292	10370454	0.29500	included	K562	HNRNPK
RI	MRPL4	ENSG00000105364.9	chr19	+	10363072	10363377	10363072	10363139	10363226	10363377	0.13400	included	K562	AQR

Showing 1 to 3 of 3 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

MRPL4

General Information

Functions

Localization

Domains (AlphaFold: MRPL4)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for MRPL4 is not avaliable on ENCORE database.

19 proteins are bound to MRPL4 RNA:

eCLIP assay for MRPL4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for MRPL4 is not available on ENCORE database.

116 RBPs can affect the gene expression of MRPL4 :

The Knockdown/knockout RNA-Seq assay for MRPL4 is not available on ENCORE database.

2 RBPs can affect the splicing of MRPL4 :

The Knockdown/knockout RNA-Seq assay for MRPL4 is not avaliable on ENCORE database.