CHMP1A

General Information

Gene Name : CHMP1A
Gene ID : ENSG00000131165.14
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: CHMP1A)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	CHMP1A	ENSG00000131165.14	7.75	24.61	16.18	ENCSR000AEF
HepG2	CHMP1A	ENSG00000131165.14	105.31	51.47	78.39	ENCSR985KAT
K562	CHMP1A	ENSG00000131165.14	40.17	27.54	33.86	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for CHMP1A is not avaliable on ENCORE database.

Proteins bound to RNA

CHMP1A RNA is bound by 27 proteins.

CanvasJS.com

eCLIP assay for CHMP1A is not avaliable on ENCORE database.

27 proteins are bound to CHMP1A RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr16	89712180	89712308	-	3'-UTR,intron-Distal,intron-Proximal	6.11401	74.80001	HepG2	UPF1
chr16	89711236	89711305	-	3'-UTR,intron-Distal	6.29808	52.08629	K562	UPF1
chr16	89712139	89712260	-	3'-UTR,intron-Distal,intron-Proximal	5.73402	42.85872	HepG2	AKAP1
chr16	89712056	89712180	-	3'-UTR,intron-Distal,intron-Proximal	6.96597	36.44815	HepG2	UPF1
chr16	89711205	89711313	-	3'-UTR,intron-Distal	4.86573	33.20595	HepG2	UPF1
chr16	89712132	89712254	-	3'-UTR,intron-Distal,intron-Proximal	4.14529	31.41491	K562	UPF1
chr16	89711204	89711306	-	3'-UTR,intron-Distal	6.73669	29.83677	HepG2	AKAP1
chr16	89711831	89711939	-	3'-UTR,intron-Distal	5.83028	25.25027	HepG2	UPF1
chr16	89711305	89711355	-	3'-UTR,intron-Distal	5.91385	23.76045	K562	UPF1
chr16	89711123	89711180	-	3'-UTR,intron-Distal	5.56444	22.14708	K562	UPF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 91 entries

eCLIP assay for CHMP1A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for CHMP1A is not available on ENCORE database.
97 RBPs can affect the levels of CHMP1A.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for CHMP1A is not available on ENCORE database.

97 RBPs can affect the gene expression of CHMP1A :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CHMP1A	ENSG00000131165.10	880.14530	1974.26410	-1.16550	37.05270	35.30060	HepG2	TAF15
CHMP1A	ENSG00000131165.10	1313.64350	732.77340	0.84200	17.75280	16.32920	K562	FXR1
CHMP1A	ENSG00000131165.10	46.71910	226.20430	-2.27550	18.29830	16.03230	K562	G3BP2
CHMP1A	ENSG00000131165.10	2232.22900	1446.31570	0.62600	15.82110	14.49610	HepG2	SRSF5
CHMP1A	ENSG00000131165.10	1672.84520	1103.67930	0.59990	15.53020	14.19530	HepG2	SMN1
CHMP1A	ENSG00000131165.10	990.82110	531.83610	0.89750	14.68820	13.21930	K562	PTBP1
CHMP1A	ENSG00000131165.10	1702.63020	1032.61080	0.72140	13.24730	12.29200	HepG2	TIAL1
CHMP1A	ENSG00000131165.10	1415.23110	944.30920	0.58360	13.17420	11.85770	HepG2	DNAJC2
CHMP1A	ENSG00000131165.10	1017.85950	547.37110	0.89480	13.81510	11.81290	K562	MAGOH
CHMP1A	ENSG00000131165.10	2374.00090	1464.81120	0.69650	11.72770	10.61700	HepG2	PUF60
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 110 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for CHMP1A is not available on ENCORE database.

2 RBPs can affect the splicing of CHMP1A :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A3SS	CHMP1A	ENSG00000131165.10	chr16	-	89715785	89715960	89715785	89715905	89717976	89718054	0.06000	0.00000	0.00000	longer	HepG2	RBM22
A3SS	CHMP1A	ENSG00000131165.10	chr16	-	89712362	89712592	89712362	89712495	89712934	89713141	0.08500	0.00000	0.00002	longer	K562	AQR
A3SS	CHMP1A	ENSG00000131165.10	chr16	-	89712934	89713182	89712934	89713122	89713610	89713739	0.20300	0.00000	0.00000	longer	K562	AQR
A3SS	CHMP1A	ENSG00000131165.10	chr16	-	89715785	89715960	89715785	89715905	89717976	89718054	0.19100	0.00000	0.00000	longer	K562	AQR
A3SS	CHMP1A	ENSG00000131165.10	chr16	-	89715785	89715960	89715785	89715905	89717976	89718054	0.08200	0.00043	0.06627	longer	K562	RBM22

Showing 1 to 5 of 5 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CHMP1A

General Information

Functions

Localization

Domains (AlphaFold: CHMP1A)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CHMP1A is not avaliable on ENCORE database.

27 proteins are bound to CHMP1A RNA:

eCLIP assay for CHMP1A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CHMP1A is not available on ENCORE database.

97 RBPs can affect the gene expression of CHMP1A :

The Knockdown/knockout RNA-Seq assay for CHMP1A is not available on ENCORE database.

2 RBPs can affect the splicing of CHMP1A :

The Knockdown/knockout RNA-Seq assay for CHMP1A is not avaliable on ENCORE database.