CEP104

General Information

Gene Name : CEP104
Gene ID : ENSG00000116198.12
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: CEP104)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	CEP104	ENSG00000116198.12	17.13	13.32	15.22	ENCSR000AEF
HepG2	CEP104	ENSG00000116198.12	22.85	23.24	23.05	ENCSR985KAT
K562	CEP104	ENSG00000116198.12	31.87	36.08	33.98	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for CEP104 is not avaliable on ENCORE database.

Proteins bound to RNA

CEP104 RNA is bound by 19 proteins.

CanvasJS.com

eCLIP assay for CEP104 is not avaliable on ENCORE database.

19 proteins are bound to CEP104 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	3741271	3741460	-	intron-Distal	6.04037	17.47122	K562	HNRNPK
chr1	3741516	3741575	-	intron-Distal	4.46644	11.13760	K562	DROSHA
chr1	3755543	3755684	-	CDS,intron-Distal,intron-Proximal	4.03183	8.54758	K562	ZNF622
chr1	3755593	3755665	-	CDS,intron-Distal,intron-Proximal	4.23546	8.35706	K562	UCHL5
chr1	3741371	3741463	-	intron-Distal	3.40180	8.34844	K562	DROSHA
chr1	3741339	3741434	-	intron-Distal	4.24027	7.99029	HepG2	HNRNPK
chr1	3741509	3741611	-	intron-Distal	4.84548	7.72290	HepG2	HNRNPK
chr1	3751469	3751590	-	CDS,intron-Distal,intron-Proximal	4.42528	7.52225	K562	UCHL5
chr1	3729839	3729896	-	3'-UTR,intron-Distal	4.36131	6.71790	K562	AKAP1
chr1	3746284	3746358	-	CDS,intron-Distal,intron-Proximal	3.36634	6.65588	K562	AQR
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 43 entries

eCLIP assay for CEP104 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for CEP104 is not available on ENCORE database.
54 RBPs can affect the levels of CEP104.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for CEP104 is not available on ENCORE database.

54 RBPs can affect the gene expression of CEP104 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CEP104	ENSG00000116198.8	1252.15030	664.42510	0.91410	19.67450	18.17370	K562	FXR1
CEP104	ENSG00000116198.8	687.65880	1263.03240	-0.87710	17.29550	15.79190	K562	RBM15
CEP104	ENSG00000116198.8	731.97690	1256.16470	-0.77920	16.34400	15.08720	K562	AGGF1
CEP104	ENSG00000116198.8	1356.15220	785.87920	0.78700	12.78740	11.26450	K562	SRSF1
CEP104	ENSG00000116198.8	728.44700	1296.43860	-0.83170	11.32130	10.27150	K562	PUS1
CEP104	ENSG00000116198.8	3176.49100	1994.22070	0.67150	11.82350	10.12680	K562	PUF60
CEP104	ENSG00000116198.8	790.60640	1307.07080	-0.72530	9.93090	8.59310	K562	AKAP8L
CEP104	ENSG00000116198.8	666.81130	1062.33590	-0.67190	10.15720	8.46480	K562	HNRNPU
CEP104	ENSG00000116198.8	258.00930	484.23820	-0.90830	8.35140	7.31760	HepG2	HNRNPA1
CEP104	ENSG00000116198.8	333.44920	535.05460	-0.68220	7.99040	7.00090	HepG2	HNRNPU
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 60 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for CEP104 is not available on ENCORE database.

12 RBPs can affect the splicing of CEP104 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	CEP104	ENSG00000116198.8	chr1	-	3753058	3753256	3751625	3751656	3753855	3753909	-0.56600	0.00000	0.00000	excluded	HepG2	U2AF1
A3SS	CEP104	ENSG00000116198.8	chr1	-	3764038	3764228	3764038	3764177	3765171	3765345	0.13800	0.00000	0.00001	longer	K562	AQR
SE	CEP104	ENSG00000116198.8	chr1	-	3743271	3743308	3742933	3743000	3745829	3745870	-0.29100	0.00009	0.00288	excluded	K562	SF3B4
SE	CEP104	ENSG00000116198.8	chr1	-	3753058	3753256	3751625	3751656	3753855	3753909	-0.31400	0.00014	0.00272	excluded	HepG2	U2AF2
SE	CEP104	ENSG00000116198.8	chr1	-	3753058	3753256	3751625	3751656	3753855	3753909	-0.36600	0.00021	0.00533	excluded	K562	U2AF2
A3SS	CEP104	ENSG00000116198.8	chr1	-	3765171	3765383	3765171	3765345	3768858	3768985	0.10000	0.00030	0.00234	longer	K562	AQR
SE	CEP104	ENSG00000116198.8	chr1	-	3738495	3738626	3732843	3732934	3739737	3739805	0.13000	0.00035	0.00582	included	HepG2	U2AF2
SE	CEP104	ENSG00000116198.8	chr1	-	3755527	3755683	3753855	3754083	3756171	3756340	-0.11500	0.00035	0.01687	excluded	K562	HNRNPU
SE	CEP104	ENSG00000116198.8	chr1	-	3755527	3755683	3753855	3754083	3756171	3756340	-0.30700	0.00042	0.01127	excluded	K562	U2AF1
A3SS	CEP104	ENSG00000116198.8	chr1	-	3768858	3769030	3768858	3768985	3773452	3773758	0.30200	0.00049	0.00369	longer	K562	AQR

Showing 1 to 10 of 20 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CEP104

General Information

Functions

Localization

Domains (AlphaFold: CEP104)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CEP104 is not avaliable on ENCORE database.

19 proteins are bound to CEP104 RNA:

eCLIP assay for CEP104 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CEP104 is not available on ENCORE database.

54 RBPs can affect the gene expression of CEP104 :

The Knockdown/knockout RNA-Seq assay for CEP104 is not available on ENCORE database.

12 RBPs can affect the splicing of CEP104 :

The Knockdown/knockout RNA-Seq assay for CEP104 is not avaliable on ENCORE database.