ATF7IP2

General Information

Gene Name : ATF7IP2
Gene ID : ENSG00000166669.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ATF7IP2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ATF7IP2	ENSG00000166669.13	27.91	24.15	26.03	ENCSR000AEF
HepG2	ATF7IP2	ENSG00000166669.13	60.54	90.41	75.47	ENCSR985KAT
K562	ATF7IP2	ENSG00000166669.13	197.55	143.69	170.62	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ATF7IP2 is not avaliable on ENCORE database.

Proteins bound to RNA

ATF7IP2 RNA is bound by 43 proteins.

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eCLIP assay for ATF7IP2 is not avaliable on ENCORE database.

43 proteins are bound to ATF7IP2 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr16	10479950	10480022	+	5'-UTR,intron-Distal,intron-Proximal	4.94731	400.00000	HepG2	PRPF8
chr16	10504233	10504288	+	intron-Distal	6.91544	58.55704	K562	EXOSC5
chr16	10505151	10505182	+	intron-Distal	6.14951	36.36389	K562	EXOSC5
chr16	10546194	10546266	+	intron-Distal	5.91066	32.34607	HepG2	SUGP2
chr16	10576151	10576234	+	3'-UTR	5.96480	31.95086	K562	CPSF6
chr16	10481587	10481664	+	intron-Distal,polyA_site	4.53633	29.22898	HepG2	CSTF2
chr16	10576234	10576332	+	3'-UTR	5.25481	28.32305	K562	CPSF6
chr16	10479950	10480044	+	5'-UTR,intron-Distal,intron-Proximal	4.85627	28.17814	K562	ZRANB2
chr16	10480012	10480098	+	intron-Distal,intron-Proximal	3.78987	27.01321	HepG2	EFTUD2
chr16	10479965	10480034	+	5'-UTR,intron-Distal,intron-Proximal	4.38259	26.50322	K562	PRPF8
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 297 entries

eCLIP assay for ATF7IP2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ATF7IP2 is not available on ENCORE database.
106 RBPs can affect the levels of ATF7IP2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ATF7IP2 is not available on ENCORE database.

106 RBPs can affect the gene expression of ATF7IP2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ATF7IP2	ENSG00000166669.9	2648.94940	932.49840	1.50610	41.49030	39.27850	K562	HNRNPC
ATF7IP2	ENSG00000166669.9	792.80360	1678.46590	-1.08210	34.63620	32.59530	K562	DDX47
ATF7IP2	ENSG00000166669.9	600.15820	1321.50310	-1.13880	33.09420	31.27070	HepG2	SRSF5
ATF7IP2	ENSG00000166669.9	3379.22720	1516.91660	1.15550	33.23440	29.82910	K562	HNRNPL
ATF7IP2	ENSG00000166669.9	875.07900	1502.94130	-0.78030	20.76110	19.30980	HepG2	SUCLG1
ATF7IP2	ENSG00000166669.9	2512.44860	1267.64220	0.98680	18.57200	17.19600	K562	PUS1
ATF7IP2	ENSG00000166669.9	1479.38120	850.75600	0.79810	18.38860	17.03180	HepG2	RECQL
ATF7IP2	ENSG00000166669.9	498.71510	1006.98070	-1.01370	18.34180	16.23190	K562	EIF3G
ATF7IP2	ENSG00000166669.9	1423.52750	801.71840	0.82820	17.05550	15.83240	HepG2	TAF15
ATF7IP2	ENSG00000166669.9	291.12690	721.08550	-1.30850	15.66010	13.69140	K562	RPS19
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 124 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ATF7IP2 is not available on ENCORE database.

16 RBPs can affect the splicing of ATF7IP2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ATF7IP2	ENSG00000166669.9	chr16	+	10565966	10566040	10534220	10534319	10567335	10567391	-0.59800	0.00000	0.00000	excluded	HepG2	U2AF2
A5SS	ATF7IP2	ENSG00000166669.9	chr16	+	10479917	10480153	10479917	10479979	10481000	10481147	-0.05200	0.00000	0.00024	shorter	K562	FXR1
A5SS	ATF7IP2	ENSG00000166669.9	chr16	+	10479917	10480153	10479917	10479979	10481000	10481147	0.06900	0.00001	0.00577	longer	K562	HNRNPU
SE	ATF7IP2	ENSG00000166669.9	chr16	+	10567779	10567846	10567335	10567391	10574735	10574820	-0.16400	0.00002	0.00106	excluded	HepG2	SF3A3
SE	ATF7IP2	ENSG00000166669.9	chr16	+	10548953	10549048	10534220	10534319	10551228	10551386	0.53400	0.00004	0.00144	included	K562	SRSF1
SE	ATF7IP2	ENSG00000166669.9	chr16	+	10567779	10567846	10567335	10567391	10574735	10574820	-0.09000	0.00004	0.00309	excluded	K562	SF3B1
SE	ATF7IP2	ENSG00000166669.9	chr16	+	10481000	10481147	10479917	10479979	10481234	10481351	-0.09900	0.00006	0.03267	excluded	K562	IGF2BP2
SE	ATF7IP2	ENSG00000166669.9	chr16	+	10565966	10566040	10534220	10534319	10567335	10567391	-0.53000	0.00008	0.00232	excluded	HepG2	U2AF1
SE	ATF7IP2	ENSG00000166669.9	chr16	+	10481234	10481351	10479911	10479979	10522724	10522873	0.70200	0.00010	0.00302	included	K562	SRSF1
SE	ATF7IP2	ENSG00000166669.9	chr16	+	10481234	10481351	10479911	10479979	10522724	10522873	0.59800	0.00021	0.01188	included	K562	PTBP1

Showing 1 to 10 of 22 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ATF7IP2

General Information

Functions

Localization

Domains (AlphaFold: ATF7IP2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ATF7IP2 is not avaliable on ENCORE database.

43 proteins are bound to ATF7IP2 RNA:

eCLIP assay for ATF7IP2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ATF7IP2 is not available on ENCORE database.

106 RBPs can affect the gene expression of ATF7IP2 :

The Knockdown/knockout RNA-Seq assay for ATF7IP2 is not available on ENCORE database.

16 RBPs can affect the splicing of ATF7IP2 :

The Knockdown/knockout RNA-Seq assay for ATF7IP2 is not avaliable on ENCORE database.