ACTR1B

General Information

Gene Name : ACTR1B
Gene ID : ENSG00000115073.7
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ACTR1B)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ACTR1B	ENSG00000115073.7	6.37	17.31	11.84	ENCSR000AEF
HepG2	ACTR1B	ENSG00000115073.7	58.65	27.95	43.30	ENCSR985KAT
K562	ACTR1B	ENSG00000115073.7	21.11	15.10	18.11	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ACTR1B is not avaliable on ENCORE database.

Proteins bound to RNA

ACTR1B RNA is bound by 25 proteins.

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eCLIP assay for ACTR1B is not avaliable on ENCORE database.

25 proteins are bound to ACTR1B RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr2	98272991	98273113	-	3'-UTR,intron-Distal	5.31396	51.22140	HepG2	GRSF1
chr2	98274638	98274728	-	CDS,intron-Distal,intron-Proximal	4.79613	28.05134	HepG2	PRPF8
chr2	98272903	98273303	-	3'-UTR,intron-Distal	3.96761	21.37170	K562	UPF1
chr2	98273153	98273244	-	3'-UTR,intron-Distal	4.52614	18.70421	HepG2	RBFOX2
chr2	98274672	98274768	-	CDS,intron-Distal,intron-Proximal	4.16800	17.90191	HepG2	PPIG
chr2	98280344	98280402	-	5'-UTR,CDS,intron-Distal,intron-Proximal	5.34986	17.39050	HepG2	DDX3X
chr2	98273152	98273254	-	3'-UTR,intron-Distal	4.57652	16.62723	HepG2	UPF1
chr2	98274514	98274569	-	CDS,intron-Distal	4.98016	16.06047	K562	LIN28B
chr2	98274523	98274593	-	CDS,intron-Distal,intron-Proximal	4.43098	15.64024	K562	AQR
chr2	98273558	98273622	-	CDS,intron-Distal,intron-Proximal	4.11075	15.22445	HepG2	PRPF8
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 94 entries

eCLIP assay for ACTR1B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ACTR1B is not available on ENCORE database.
85 RBPs can affect the levels of ACTR1B.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ACTR1B is not available on ENCORE database.

85 RBPs can affect the gene expression of ACTR1B :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ACTR1B	ENSG00000115073.6	1127.25280	2445.71060	-1.11740	49.56210	48.13240	HepG2	SRFBP1
ACTR1B	ENSG00000115073.6	328.23330	766.49860	-1.22360	24.10960	22.43970	K562	FXR1
ACTR1B	ENSG00000115073.6	1202.20900	2182.82040	-0.86050	22.34670	20.89330	HepG2	PCBP1
ACTR1B	ENSG00000115073.6	1069.07610	2311.92690	-1.11270	18.89160	17.21700	HepG2	HNRNPK
ACTR1B	ENSG00000115073.6	494.55110	1092.06720	-1.14290	17.06040	15.76570	K562	AQR
ACTR1B	ENSG00000115073.6	991.82190	1682.17430	-0.76220	14.49310	13.03550	HepG2	PUM2
ACTR1B	ENSG00000115073.6	1314.74140	2169.75740	-0.72280	13.13410	12.04810	HepG2	TAF15
ACTR1B	ENSG00000115073.6	2283.74560	1565.72210	0.54450	11.95450	10.77850	HepG2	SRSF5
ACTR1B	ENSG00000115073.6	1082.55800	625.25570	0.79180	11.97270	10.63160	K562	EIF2S2
ACTR1B	ENSG00000115073.6	1593.90560	2312.36630	-0.53680	10.84670	9.79450	HepG2	SF3B4
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 97 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ACTR1B is not available on ENCORE database.

25 RBPs can affect the splicing of ACTR1B :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	ACTR1B	ENSG00000115073.6	chr2	-	98277033	98277109	98275814	98275940	98278344	98278409	-0.20600	0.00001	excluded	HepG2	U2AF1
SE	ACTR1B	ENSG00000115073.6	chr2	-	98277033	98277109	98275814	98275940	98278344	98278409	-0.15200	0.00006	excluded	K562	AQR
RI	ACTR1B	ENSG00000115073.6	chr2	-	98274889	98275466	98274889	98275106	98275341	98275466	0.40500	0.00016	included	K562	SF3B4
RI	ACTR1B	ENSG00000115073.6	chr2	-	98274889	98275466	98274889	98275106	98275341	98275466	0.22000	0.00001	included	HepG2	PCBP2
RI	ACTR1B	ENSG00000115073.6	chr2	-	98274889	98275466	98274889	98275106	98275341	98275466	0.23200	0.00001	included	HepG2	PRPF8
RI	ACTR1B	ENSG00000115073.6	chr2	-	98274889	98275466	98274889	98275106	98275341	98275466	0.16800	0.00002	included	HepG2	PCBP1
RI	ACTR1B	ENSG00000115073.6	chr2	-	98274889	98275466	98274889	98275106	98275341	98275466	0.22600	0.00001	included	HepG2	U2AF1
RI	ACTR1B	ENSG00000115073.6	chr2	-	98274889	98275466	98274889	98275106	98275341	98275466	0.26200	0.00000	included	HepG2	TIAL1
RI	ACTR1B	ENSG00000115073.6	chr2	-	98274889	98275466	98274889	98275106	98275341	98275466	0.28700	0.00000	included	HepG2	SF3B4
RI	ACTR1B	ENSG00000115073.6	chr2	-	98274889	98275466	98274889	98275106	98275341	98275466	0.15100	0.00007	included	HepG2	SRSF9

Showing 1 to 10 of 31 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ACTR1B

General Information

Functions

Localization

Domains (AlphaFold: ACTR1B)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ACTR1B is not avaliable on ENCORE database.

25 proteins are bound to ACTR1B RNA:

eCLIP assay for ACTR1B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ACTR1B is not available on ENCORE database.

85 RBPs can affect the gene expression of ACTR1B :

The Knockdown/knockout RNA-Seq assay for ACTR1B is not available on ENCORE database.

25 RBPs can affect the splicing of ACTR1B :

The Knockdown/knockout RNA-Seq assay for ACTR1B is not avaliable on ENCORE database.