ZDHHC9

General Information

Gene Name : ZDHHC9
Gene ID : ENSG00000188706.12
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ZDHHC9)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ZDHHC9	ENSG00000188706.12	5.32	5.54	5.43	ENCSR000AEF
HepG2	ZDHHC9	ENSG00000188706.12	18.62	24.73	21.68	ENCSR985KAT
K562	ZDHHC9	ENSG00000188706.12	12.83	15.05	13.94	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ZDHHC9 is not avaliable on ENCORE database.

Proteins bound to RNA

ZDHHC9 RNA is bound by 18 proteins.

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eCLIP assay for ZDHHC9 is not avaliable on ENCORE database.

18 proteins are bound to ZDHHC9 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chrX	128977671	128977754	-	5'-UTR,intron-Distal	5.89020	68.48370	HepG2	DDX3X
chrX	128939690	128939777	-	3'-UTR,intron-Distal	5.24286	40.62989	K562	UPF1
chrX	128977235	128977302	-	5'-UTR,intron-Distal	5.81630	32.71308	HepG2	DDX3X
chrX	128977757	128977805	-	5'-UTR,intron-Distal	6.44236	28.10391	HepG2	DDX3X
chrX	128939595	128939648	-	3'-UTR,intron-Distal	4.84037	22.61954	K562	UPF1
chrX	128940006	128940067	-	3'-UTR,intron-Distal	6.59544	22.61753	HepG2	UPF1
chrX	128939563	128939620	-	3'-UTR,intron-Distal	6.37323	21.73270	HepG2	UPF1
chrX	128940067	128940126	-	3'-UTR,intron-Distal	6.43463	21.10731	HepG2	UPF1
chrX	128939655	128939690	-	3'-UTR,intron-Distal	4.87846	17.94406	K562	UPF1
chrX	128939620	128939672	-	3'-UTR,intron-Distal	4.61867	17.77343	HepG2	UPF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 66 entries

eCLIP assay for ZDHHC9 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ZDHHC9 is not available on ENCORE database.
110 RBPs can affect the levels of ZDHHC9.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ZDHHC9 is not available on ENCORE database.

110 RBPs can affect the gene expression of ZDHHC9 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ZDHHC9	ENSG00000188706.8	1171.67920	3406.35530	-1.53970	98.21510	96.35350	HepG2	SRSF1
ZDHHC9	ENSG00000188706.8	1164.81360	3263.49820	-1.48630	84.67250	82.31110	HepG2	SF3B4
ZDHHC9	ENSG00000188706.8	1366.03010	3488.43720	-1.35260	72.34770	70.51510	HepG2	NELFE
ZDHHC9	ENSG00000188706.8	1696.40030	3248.94270	-0.93750	38.00840	36.23490	HepG2	RECQL
ZDHHC9	ENSG00000188706.8	1268.14800	2337.25590	-0.88210	28.68460	27.03360	HepG2	SUCLG1
ZDHHC9	ENSG00000188706.8	3750.78890	1717.95220	1.12640	28.22540	26.64760	HepG2	BOP1
ZDHHC9	ENSG00000188706.8	1802.77590	3080.52180	-0.77300	26.49430	24.93930	HepG2	PCBP1
ZDHHC9	ENSG00000188706.8	1320.84800	2209.59870	-0.74230	26.01530	24.57230	HepG2	PUM1
ZDHHC9	ENSG00000188706.8	1438.64490	3635.15790	-1.33730	25.30630	23.88240	HepG2	AKAP1
ZDHHC9	ENSG00000188706.8	3534.79410	1706.12510	1.05080	21.11120	19.62890	HepG2	HNRNPLL
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 123 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ZDHHC9 is not available on ENCORE database.

3 RBPs can affect the splicing of ZDHHC9 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ZDHHC9	ENSG00000188706.8	chrX	-	128977234	128977302	128975754	128976056	128977671	128977860	0.21300	0.00015	0.01832	included	K562	HNRNPUL1
SE	ZDHHC9	ENSG00000188706.8	chrX	-	128977234	128977302	128975754	128976056	128977671	128977860	0.23300	0.00041	0.06120	included	K562	DROSHA
SE	ZDHHC9	ENSG00000188706.8	chrX	-	128977234	128977302	128975754	128976056	128977671	128977860	0.22700	0.00073	0.09688	included	K562	NPM1

Showing 1 to 3 of 3 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ZDHHC9

General Information

Functions

Localization

Domains (AlphaFold: ZDHHC9)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ZDHHC9 is not avaliable on ENCORE database.

18 proteins are bound to ZDHHC9 RNA:

eCLIP assay for ZDHHC9 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ZDHHC9 is not available on ENCORE database.

110 RBPs can affect the gene expression of ZDHHC9 :

The Knockdown/knockout RNA-Seq assay for ZDHHC9 is not available on ENCORE database.

3 RBPs can affect the splicing of ZDHHC9 :

The Knockdown/knockout RNA-Seq assay for ZDHHC9 is not avaliable on ENCORE database.