WSB1

General Information

Gene Name : WSB1
Gene ID : ENSG00000109046.14
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: WSB1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	WSB1	ENSG00000109046.14	95.40	73.53	84.47	ENCSR000AEF
HepG2	WSB1	ENSG00000109046.14	48.77	77.32	63.05	ENCSR985KAT
K562	WSB1	ENSG00000109046.14	68.39	54.52	61.45	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for WSB1 is not avaliable on ENCORE database.

Proteins bound to RNA

WSB1 RNA is bound by 36 proteins.

CanvasJS.com

eCLIP assay for WSB1 is not avaliable on ENCORE database.

36 proteins are bound to WSB1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	25635560	25635595	+	3'-UTR,intron-Distal	5.23665	400.00000	K562	KHSRP
chr17	25636072	25636124	+	intron-Proximal	5.41367	82.77817	K562	SF3B4
chr17	25635533	25635560	+	3'-UTR,intron-Distal	5.01500	82.57836	K562	KHSRP
chr17	25636210	25636246	+	CDS	6.46991	77.61288	K562	RBM15
chr17	25636205	25636210	+	CDS	7.48489	73.42159	K562	RBM15
chr17	25633807	25633927	+	3'-UTR,CDS,intron-Proximal	3.14984	61.85571	HepG2	BCLAF1
chr17	25635595	25635612	+	3'-UTR,intron-Distal	4.94177	60.29768	K562	KHSRP
chr17	25635598	25635672	+	3'-UTR,intron-Distal	4.52647	57.71370	HepG2	U2AF2
chr17	25636114	25636142	+	CDS,intron-Proximal	5.95990	57.51571	K562	U2AF2
chr17	25637150	25637200	+	CDS	3.62819	52.53105	HepG2	BCLAF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 230 entries

eCLIP assay for WSB1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for WSB1 is not available on ENCORE database.
133 RBPs can affect the levels of WSB1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for WSB1 is not available on ENCORE database.

133 RBPs can affect the gene expression of WSB1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
WSB1	ENSG00000109046.10	10035.69020	3254.58150	1.62450	145.73070	143.09340	HepG2	SRSF9
WSB1	ENSG00000109046.10	2921.46440	6972.97310	-1.25510	121.37590	118.79750	HepG2	PUM1
WSB1	ENSG00000109046.10	1791.29270	6568.81850	-1.87460	89.36600	86.60850	HepG2	PUF60
WSB1	ENSG00000109046.10	2407.88220	5284.54850	-1.13400	83.67180	81.28140	HepG2	CKAP4
WSB1	ENSG00000109046.10	1858.34250	4066.10290	-1.12960	62.30350	60.05740	HepG2	UTP3
WSB1	ENSG00000109046.10	2355.40550	4040.58490	-0.77860	41.60910	39.65280	HepG2	SMN1
WSB1	ENSG00000109046.10	2725.06500	5057.15890	-0.89200	39.85240	38.06910	HepG2	DKC1
WSB1	ENSG00000109046.10	3004.82960	6604.77520	-1.13620	38.52100	36.15120	K562	PTBP1
WSB1	ENSG00000109046.10	3163.45670	5384.04910	-0.76720	35.95160	34.20750	HepG2	PUS1
WSB1	ENSG00000109046.10	2975.17340	6553.23590	-1.13920	27.60420	24.90390	K562	TARDBP
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 161 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for WSB1 is not available on ENCORE database.

71 RBPs can affect the splicing of WSB1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	WSB1	ENSG00000109046.10	chr17	+	25634769	25634945	25633807	25633908	25636125	25636298	0.14400	0.00625	included	K562	IGF2BP2
SE	WSB1	ENSG00000109046.10	chr17	+	25634769	25634945	25633807	25633908	25636125	25636298	0.22700	0.00375	included	HepG2	FASTKD2
SE	WSB1	ENSG00000109046.10	chr17	+	25634769	25634945	25633807	25633908	25636125	25636298	-0.62800	0.00000	excluded	K562	SRSF1
SE	WSB1	ENSG00000109046.10	chr17	+	25634769	25634945	25633807	25633908	25636125	25636298	0.22800	0.00349	included	K562	RPS3
SE	WSB1	ENSG00000109046.10	chr17	+	25634769	25634945	25633807	25633908	25636125	25636298	0.31400	0.00000	included	K562	FUS
SE	WSB1	ENSG00000109046.10	chr17	+	25637086	25637200	25636125	25636298	25638534	25638642	-0.26800	0.00000	excluded	K562	SF3B4
SE	WSB1	ENSG00000109046.10	chr17	+	25634769	25634945	25633807	25633908	25636125	25636298	-0.40400	0.00000	excluded	K562	SF3B4
SE	WSB1	ENSG00000109046.10	chr17	+	25637086	25637200	25636125	25636298	25638534	25638642	-0.14500	0.00001	excluded	K562	PRPF8
SE	WSB1	ENSG00000109046.10	chr17	+	25634769	25634945	25633807	25633908	25636125	25636298	-0.43300	0.00000	excluded	K562	PRPF8
SE	WSB1	ENSG00000109046.10	chr17	+	25634769	25634945	25633807	25633908	25636125	25636298	-0.20300	0.00002	excluded	HepG2	RBM22

Showing 1 to 10 of 181 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

WSB1

General Information

Functions

Localization

Domains (AlphaFold: WSB1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for WSB1 is not avaliable on ENCORE database.

36 proteins are bound to WSB1 RNA:

eCLIP assay for WSB1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for WSB1 is not available on ENCORE database.

133 RBPs can affect the gene expression of WSB1 :

The Knockdown/knockout RNA-Seq assay for WSB1 is not available on ENCORE database.

71 RBPs can affect the splicing of WSB1 :

The Knockdown/knockout RNA-Seq assay for WSB1 is not avaliable on ENCORE database.