PUS10

General Information

Gene Name : PUS10
Gene ID : ENSG00000162927.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PUS10)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PUS10	ENSG00000162927.13	12.56	9.03	10.79	ENCSR000AEF
HepG2	PUS10	ENSG00000162927.13	12.88	24.09	18.48	ENCSR985KAT
K562	PUS10	ENSG00000162927.13	5.77	6.53	6.15	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PUS10 is not avaliable on ENCORE database.

Proteins bound to RNA

PUS10 RNA is bound by 18 proteins.

CanvasJS.com

eCLIP assay for PUS10 is not avaliable on ENCORE database.

18 proteins are bound to PUS10 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr2	61214528	61214560	-	intron-Distal	5.27611	31.92067	HepG2	PTBP1
chr2	61208057	61208105	-	intron-Distal	4.72695	29.41094	HepG2	XPO5
chr2	61214494	61214528	-	intron-Distal	4.82770	28.77430	HepG2	PTBP1
chr2	61208045	61208057	-	intron-Distal	4.69082	23.14306	HepG2	XPO5
chr2	61235953	61236040	-	3'-UTR,CDS,intron-Distal	3.94307	20.03381	HepG2	BCLAF1
chr2	61233682	61233737	-	CDS,intron-Distal,intron-Proximal	3.47615	13.90696	HepG2	BCLAF1
chr2	61182149	61182207	-	CDS,intron-Distal,intron-Proximal	3.08374	13.08286	HepG2	BCLAF1
chr2	61236040	61236111	-	3'-UTR,CDS,intron-Distal	4.49949	12.93761	HepG2	BCLAF1
chr2	61180158	61180253	-	CDS,intron-Distal,intron-Proximal	4.03570	12.83484	HepG2	BCLAF1
chr2	61172105	61172169	-	CDS,intron-Distal,intron-Proximal	4.55948	11.83008	HepG2	PRPF8
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 58 entries

eCLIP assay for PUS10 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PUS10 is not available on ENCORE database.
137 RBPs can affect the levels of PUS10.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for PUS10 is not available on ENCORE database.

137 RBPs can affect the gene expression of PUS10 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PUS10	ENSG00000162927.9	300.36330	1194.27710	-1.99140	85.53620	83.39640	HepG2	ACO1
PUS10	ENSG00000162927.9	499.31640	1501.04140	-1.58790	66.89310	64.92820	HepG2	SRSF9
PUS10	ENSG00000162927.9	2472.05710	632.25130	1.96700	65.93700	63.26090	HepG2	SF3B1
PUS10	ENSG00000162927.9	814.52040	1822.60090	-1.16200	52.46070	50.85530	HepG2	ZNF622
PUS10	ENSG00000162927.9	742.13010	1889.52360	-1.34830	51.95840	50.30710	HepG2	NELFE
PUS10	ENSG00000162927.9	664.08250	1658.35990	-1.32030	42.85680	40.99100	HepG2	TAF15
PUS10	ENSG00000162927.9	360.20360	908.35300	-1.33440	35.72160	33.98250	HepG2	TRIM56
PUS10	ENSG00000162927.9	354.00030	1248.25390	-1.81810	32.86960	30.78580	HepG2	FIP1L1
PUS10	ENSG00000162927.9	384.39520	917.14260	-1.25460	30.56370	28.34740	HepG2	PARN
PUS10	ENSG00000162927.9	411.63310	926.54280	-1.17050	29.32090	27.52660	HepG2	HNRNPU
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 148 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PUS10 is not available on ENCORE database.

5 RBPs can affect the splicing of PUS10 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	PUS10	ENSG00000162927.9	chr2	-	61240572	61240619			61238899	61239040	61245142	61245394	0.19500	0.00007	0.00761	included	HepG2	AKAP1
SE	PUS10	ENSG00000162927.9	chr2	-	61237790	61238023			61235915	61236150	61238899	61239040	-0.33100	0.00021	0.00588	excluded	K562	SRSF1
SE	PUS10	ENSG00000162927.9	chr2	-	61237790	61238023			61235915	61236150	61238899	61239040	0.29800	0.00026	0.00969	included	K562	AGGF1
SE	PUS10	ENSG00000162927.9	chr2	-	61237790	61238023			61235915	61236150	61238899	61239040	0.30600	0.00091	0.06095	included	HepG2	HNRNPL
SE	PUS10	ENSG00000162927.9	chr2	-	61237790	61238023			61235915	61236150	61238899	61239040	0.07300	0.00360	0.05850	included	HepG2	U2AF1
MXE	PUS10	ENSG00000162927.9	chr2	-	61235895	61236150	61238899	61239040	61233691	61233778	61244283	61244328	0.43900	0.00375	0.09793	1included	K562	AGGF1

Showing 1 to 6 of 6 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PUS10

General Information

Functions

Localization

Domains (AlphaFold: PUS10)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PUS10 is not avaliable on ENCORE database.

18 proteins are bound to PUS10 RNA:

eCLIP assay for PUS10 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PUS10 is not available on ENCORE database.

137 RBPs can affect the gene expression of PUS10 :

The Knockdown/knockout RNA-Seq assay for PUS10 is not available on ENCORE database.

5 RBPs can affect the splicing of PUS10 :

The Knockdown/knockout RNA-Seq assay for PUS10 is not avaliable on ENCORE database.