PIGZ

General Information

Gene Name : PIGZ
Gene ID : ENSG00000119227.7
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PIGZ)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PIGZ	ENSG00000119227.7	0.28	0.60	0.44	ENCSR000AEF
HepG2	PIGZ	ENSG00000119227.7	9.95	6.81	8.38	ENCSR985KAT
K562	PIGZ	ENSG00000119227.7	0.57	0.61	0.59	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PIGZ is not avaliable on ENCORE database.

Proteins bound to RNA

PIGZ RNA is bound by 18 proteins.

CanvasJS.com

eCLIP assay for PIGZ is not avaliable on ENCORE database.

18 proteins are bound to PIGZ RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr3	196693523	196693656	-	intron-Distal	5.13221	26.93680	HepG2	SLTM
chr3	196695384	196695504	-	intron-Distal	5.76574	23.83306	HepG2	SLTM
chr3	196690633	196690775	-	intron-Distal	4.37242	23.76695	HepG2	HLTF
chr3	196695581	196695664	-	5'-UTR,intron-Distal	3.83984	20.32999	HepG2	DDX3X
chr3	196675645	196675731	-	intron-Distal	5.09214	16.07700	HepG2	PRPF4
chr3	196693956	196694024	-	intron-Distal	5.29395	15.46017	HepG2	SLTM
chr3	196695366	196695435	-	intron-Distal	3.58457	14.51936	HepG2	HLTF
chr3	196687569	196687596	-	intron-Distal	4.38262	14.50192	HepG2	PTBP1
chr3	196693104	196693162	-	intron-Distal	4.08769	14.15141	HepG2	HLTF
chr3	196695177	196695240	-	intron-Distal	4.13413	14.11355	HepG2	HLTF
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 70 entries

eCLIP assay for PIGZ is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PIGZ is not available on ENCORE database.
121 RBPs can affect the levels of PIGZ.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for PIGZ is not available on ENCORE database.

121 RBPs can affect the gene expression of PIGZ :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PIGZ	ENSG00000119227.3	197.60640	2378.16920	-3.58910	280.70920	278.03010	HepG2	SRSF1
PIGZ	ENSG00000119227.3	346.47840	1532.97810	-2.14550	101.88410	99.11100	HepG2	UTP3
PIGZ	ENSG00000119227.3	2184.43170	600.81630	1.86220	98.38090	95.51390	HepG2	HNRNPF
PIGZ	ENSG00000119227.3	1916.39380	590.31430	1.69870	79.84990	77.39640	HepG2	SRSF7
PIGZ	ENSG00000119227.3	713.33580	1860.87260	-1.38330	66.27880	64.19740	HepG2	PUM1
PIGZ	ENSG00000119227.3	1929.89830	854.72780	1.17490	54.95670	52.35290	HepG2	DNAJC2
PIGZ	ENSG00000119227.3	369.14480	1790.40850	-2.27800	45.81070	43.08520	HepG2	SF3A3
PIGZ	ENSG00000119227.3	381.60200	1225.90170	-1.68370	44.66140	42.74330	HepG2	RPS19
PIGZ	ENSG00000119227.3	1961.89810	943.06810	1.05670	38.83660	37.02990	HepG2	TRIM56
PIGZ	ENSG00000119227.3	1761.01190	856.64430	1.03950	38.38550	36.40950	HepG2	SAFB2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 132 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PIGZ is not available on ENCORE database.

10 RBPs can affect the splicing of PIGZ :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	PIGZ	ENSG00000119227.3	chr3	-	196677204	196677363	196673213	196675556	196678691	196678902	-0.10700	0.00000	0.00005	excluded	HepG2	DDX3X
SE	PIGZ	ENSG00000119227.3	chr3	-	196677204	196677363	196673213	196675556	196678691	196678902	-0.10200	0.00002	0.00314	excluded	HepG2	NCBP2
SE	PIGZ	ENSG00000119227.3	chr3	-	196677204	196677429	196673213	196675556	196678691	196678902	-0.20500	0.00004	0.02738	excluded	HepG2	SMNDC1
SE	PIGZ	ENSG00000119227.3	chr3	-	196677204	196677363	196673213	196675556	196678691	196678902	-0.10200	0.00007	0.00735	excluded	HepG2	AKAP1
SE	PIGZ	ENSG00000119227.3	chr3	-	196677204	196677363	196673213	196675556	196678691	196678902	-0.10700	0.00048	0.02445	excluded	HepG2	MATR3
SE	PIGZ	ENSG00000119227.3	chr3	-	196677204	196677363	196673213	196675556	196678691	196678902	-0.19400	0.00065	0.02762	excluded	HepG2	HNRNPC
SE	PIGZ	ENSG00000119227.3	chr3	-	196677204	196677363	196673213	196675556	196678691	196678902	-0.08800	0.00071	0.06033	excluded	HepG2	G3BP1
SE	PIGZ	ENSG00000119227.3	chr3	-	196677204	196677429	196673213	196675556	196678691	196678902	-0.07200	0.00127	0.06195	excluded	HepG2	PTBP1
SE	PIGZ	ENSG00000119227.3	chr3	-	196677204	196677363	196673213	196675556	196678691	196678902	-0.06700	0.00161	0.06937	excluded	HepG2	PCBP1
SE	PIGZ	ENSG00000119227.3	chr3	-	196677204	196677363	196673213	196675556	196678691	196678902	-0.05700	0.00268	0.09651	excluded	HepG2	SF3B4

Showing 1 to 10 of 10 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PIGZ

General Information

Functions

Localization

Domains (AlphaFold: PIGZ)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PIGZ is not avaliable on ENCORE database.

18 proteins are bound to PIGZ RNA:

eCLIP assay for PIGZ is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PIGZ is not available on ENCORE database.

121 RBPs can affect the gene expression of PIGZ :

The Knockdown/knockout RNA-Seq assay for PIGZ is not available on ENCORE database.

10 RBPs can affect the splicing of PIGZ :

The Knockdown/knockout RNA-Seq assay for PIGZ is not avaliable on ENCORE database.