P4HA1

General Information

Gene Name : P4HA1
Gene ID : ENSG00000122884.12
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: P4HA1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	P4HA1	ENSG00000122884.12	17.81	15.87	16.84	ENCSR000AEF
HepG2	P4HA1	ENSG00000122884.12	51.46	98.81	75.14	ENCSR985KAT
K562	P4HA1	ENSG00000122884.12	17.78	20.41	19.09	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for P4HA1 is not avaliable on ENCORE database.

Proteins bound to RNA

P4HA1 RNA is bound by 45 proteins.

CanvasJS.com

eCLIP assay for P4HA1 is not avaliable on ENCORE database.

45 proteins are bound to P4HA1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr10	74856521	74856624	-	5'-UTR,intron-Distal,intron-Proximal	3.95205	65.78183	HepG2	DDX3X
chr10	74784963	74785012	-	intron-Distal	5.96933	60.61881	K562	EXOSC5
chr10	74769570	74769644	-	CDS,intron-Distal	5.36703	46.70030	K562	LIN28B
chr10	74783903	74783938	-	intron-Distal	5.77170	39.33780	K562	EXOSC5
chr10	74784716	74784765	-	intron-Distal	7.12495	37.19758	K562	EXOSC5
chr10	74831788	74831858	-	CDS,intron-Distal	3.69475	34.60940	HepG2	BCLAF1
chr10	74767894	74767963	-	3'-UTR,intron-Distal	3.55054	32.66398	K562	PABPC4
chr10	74783884	74783903	-	intron-Distal	6.02140	32.35167	K562	EXOSC5
chr10	74786452	74786510	-	intron-Distal	5.11532	30.20832	K562	EXOSC5
chr10	74785174	74785225	-	intron-Distal	4.99502	29.56224	K562	EXOSC5
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 265 entries

eCLIP assay for P4HA1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for P4HA1 is not available on ENCORE database.
154 RBPs can affect the levels of P4HA1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for P4HA1 is not available on ENCORE database.

154 RBPs can affect the gene expression of P4HA1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
P4HA1	ENSG00000122884.8	2239.31020	15489.51210	-2.79020	99999.99999	99999.99999	HepG2	SRSF1
P4HA1	ENSG00000122884.8	2375.38400	7209.88820	-1.60180	195.93720	192.68320	HepG2	SMN1
P4HA1	ENSG00000122884.8	4634.04170	15862.88440	-1.77530	185.83820	183.21880	HepG2	NELFE
P4HA1	ENSG00000122884.8	4040.02840	14253.73640	-1.81890	184.83120	181.98120	HepG2	PTBP1
P4HA1	ENSG00000122884.8	1252.96660	7335.65450	-2.54960	155.54260	152.91170	HepG2	RBM22
P4HA1	ENSG00000122884.8	3659.39690	9285.57080	-1.34340	149.53680	146.76500	HepG2	PUM1
P4HA1	ENSG00000122884.8	5059.85210	14839.64340	-1.55230	147.35680	144.33180	HepG2	SF3B4
P4HA1	ENSG00000122884.8	4948.55110	14007.88720	-1.50120	133.65600	130.64310	HepG2	PCBP1
P4HA1	ENSG00000122884.8	1629.22030	6745.98040	-2.04980	129.72480	127.28650	HepG2	TIAL1
P4HA1	ENSG00000122884.8	504.46930	2725.24300	-2.43350	108.83810	104.94460	K562	SAFB
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 202 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for P4HA1 is not available on ENCORE database.

40 RBPs can affect the splicing of P4HA1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	P4HA1	ENSG00000122884.8	chr10	-	74776603	74776657			74773981	74774047	74790028	74790128	-0.09300	0.00000	excluded	HepG2	U2AF2
SE	P4HA1	ENSG00000122884.8	chr10	-	74837478	74837571			74834565	74834673	74856523	74856732	0.22200	0.00000	included	HepG2	HNRNPC
SE	P4HA1	ENSG00000122884.8	chr10	-	74810810	74811007			74806682	74806859	74813108	74813348	-0.08100	0.00000	excluded	K562	PTBP1
SE	P4HA1	ENSG00000122884.8	chr10	-	74837478	74837571			74834565	74834673	74856523	74856732	0.29300	0.00000	included	K562	HNRNPC
MXE	P4HA1	ENSG00000122884.8	chr10	-	74803644	74803715	74804738	74804809	74790024	74790128	74806682	74806859	0.13700	0.00253	1included	HepG2	HNRNPA1
MXE	P4HA1	ENSG00000122884.8	chr10	-	74803644	74803715	74804738	74804809	74790028	74790128	74806682	74806859	0.12800	0.00000	1included	K562	PTBP1
MXE	P4HA1	ENSG00000122884.8	chr10	-	74803644	74803715	74804738	74804809	74790024	74790128	74806682	74806859	-0.05100	0.00000	2included	K562	RBM15
MXE	P4HA1	ENSG00000122884.8	chr10	-	74833488	74833580	74834565	74834673	74831786	74831938	74856523	74856608	-0.14200	0.00000	2included	K562	U2AF1
MXE	P4HA1	ENSG00000122884.8	chr10	-	74803644	74803715	74804738	74804809	74790024	74790128	74806682	74806859	-0.05800	0.00000	2included	K562	AGGF1
MXE	P4HA1	ENSG00000122884.8	chr10	-	74803644	74803715	74804738	74804809	74790024	74790128	74806682	74806859	-0.06200	0.00011	2included	K562	SRSF1

Showing 1 to 10 of 56 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

P4HA1

General Information

Functions

Localization

Domains (AlphaFold: P4HA1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for P4HA1 is not avaliable on ENCORE database.

45 proteins are bound to P4HA1 RNA:

eCLIP assay for P4HA1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for P4HA1 is not available on ENCORE database.

154 RBPs can affect the gene expression of P4HA1 :

The Knockdown/knockout RNA-Seq assay for P4HA1 is not available on ENCORE database.

40 RBPs can affect the splicing of P4HA1 :

The Knockdown/knockout RNA-Seq assay for P4HA1 is not avaliable on ENCORE database.