MKLN1

General Information

Gene Name : MKLN1
Gene ID : ENSG00000128585.17
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: MKLN1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	MKLN1	ENSG00000128585.17	20.15	14.79	17.47	ENCSR000AEF
HepG2	MKLN1	ENSG00000128585.17	16.49	18.88	17.68	ENCSR985KAT
K562	MKLN1	ENSG00000128585.17	28.07	21.49	24.78	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for MKLN1 is not avaliable on ENCORE database.

Proteins bound to RNA

MKLN1 RNA is bound by 42 proteins.

CanvasJS.com

eCLIP assay for MKLN1 is not avaliable on ENCORE database.

42 proteins are bound to MKLN1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr7	131181274	131181360	+	3'-UTR	6.57705	34.66047	K562	PUM2
chr7	131084052	131084195	+	3'-UTR,5'-UTR,CDS,intron-Proximal	4.53173	28.03660	K562	DDX24
chr7	131084039	131084199	+	3'-UTR,5'-UTR,CDS,intron-Proximal	4.01753	26.89565	HepG2	BCLAF1
chr7	131082023	131082113	+	CDS,intron-Proximal	4.32827	26.05608	HepG2	BCLAF1
chr7	131071926	131072023	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.98379	21.77547	HepG2	BCLAF1
chr7	131174617	131174715	+	3'-UTR	4.13623	19.66458	K562	FAM120A
chr7	131020611	131020642	+	intron-Distal	4.15702	18.80908	K562	KHSRP
chr7	131020642	131020724	+	intron-Distal	4.44103	18.45883	K562	KHSRP
chr7	131049823	131049902	+	intron-Distal	5.28666	18.45581	K562	QKI
chr7	131082023	131082077	+	CDS,intron-Proximal	4.60048	17.88084	K562	DDX24
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 261 entries

eCLIP assay for MKLN1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for MKLN1 is not available on ENCORE database.
99 RBPs can affect the levels of MKLN1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for MKLN1 is not available on ENCORE database.

99 RBPs can affect the gene expression of MKLN1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
MKLN1	ENSG00000128585.13	3877.44330	1845.70640	1.07080	37.42630	35.83830	HepG2	SRSF9
MKLN1	ENSG00000128585.13	4021.86810	2500.53930	0.68550	31.95150	30.61500	HepG2	ZNF622
MKLN1	ENSG00000128585.13	5083.45700	3144.61380	0.69280	29.39350	28.21000	HepG2	SRFBP1
MKLN1	ENSG00000128585.13	1249.86480	2220.65460	-0.82920	27.08660	25.35130	HepG2	HNRNPU
MKLN1	ENSG00000128585.13	1088.20470	2157.94030	-0.98770	25.68780	24.45230	HepG2	TIAL1
MKLN1	ENSG00000128585.13	1185.79440	1972.97200	-0.73450	24.25160	22.50240	HepG2	DNAJC2
MKLN1	ENSG00000128585.13	1458.97370	2268.33240	-0.63670	21.21800	19.40390	HepG2	ILF2
MKLN1	ENSG00000128585.13	4450.61520	2784.13650	0.67670	19.25760	18.14350	HepG2	RBM22
MKLN1	ENSG00000128585.13	1259.70120	2311.87510	-0.87600	17.28760	15.98280	HepG2	PUS1
MKLN1	ENSG00000128585.13	1241.69550	1980.65390	-0.67370	14.36910	12.76480	HepG2	PPIL4
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 110 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for MKLN1 is not available on ENCORE database.

8 RBPs can affect the splicing of MKLN1 :

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Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A3SS	MKLN1	ENSG00000128585.13	chr7	+	131099382	131099540			131099403	131099540	131096064	131096142	0.10500	0.00000	0.00000	longer	K562	AQR
MXE	MKLN1	ENSG00000128585.13	chr7	+	131128239	131128461	131130532	131130662	131122543	131122756	131147975	131148123	-0.23900	0.00000	0.00046	2included	HepG2	XRN2
SE	MKLN1	ENSG00000128585.13	chr7	+	131058468	131058505			131012618	131012756	131060182	131060252	0.05100	0.00001	0.00086	included	HepG2	SF3A3
A3SS	MKLN1	ENSG00000128585.13	chr7	+	131149026	131149167			131149052	131149167	131147975	131148123	0.05500	0.00009	0.00079	longer	K562	AQR
A3SS	MKLN1	ENSG00000128585.13	chr7	+	131083996	131084192			131083999	131084192	131082025	131082135	0.10800	0.00013	0.00110	longer	K562	AQR
A5SS	MKLN1	ENSG00000128585.13	chr7	+	131099403	131099540			131099403	131099469	131113791	131113904	0.05800	0.00030	0.00684	longer	K562	AQR
A5SS	MKLN1	ENSG00000128585.13	chr7	+	131099403	131099540			131099403	131099469	131113791	131113904	0.08300	0.00040	0.04794	longer	K562	EFTUD2
A5SS	MKLN1	ENSG00000128585.13	chr7	+	131099403	131099540			131099403	131099469	131113791	131113904	0.05500	0.00043	0.03675	longer	HepG2	SF3A3
SE	MKLN1	ENSG00000128585.13	chr7	+	131163381	131163436			131155600	131155703	131172365	131181395	-0.09600	0.00048	0.01156	excluded	K562	SF3B4
SE	MKLN1	ENSG00000128585.13	chr7	+	131130532	131130662			131128239	131128461	131147975	131148123	-0.07900	0.00174	0.08862	excluded	HepG2	FTO

Showing 1 to 10 of 12 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

MKLN1

General Information

Functions

Localization

Domains (AlphaFold: MKLN1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for MKLN1 is not avaliable on ENCORE database.

42 proteins are bound to MKLN1 RNA:

eCLIP assay for MKLN1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for MKLN1 is not available on ENCORE database.

99 RBPs can affect the gene expression of MKLN1 :

The Knockdown/knockout RNA-Seq assay for MKLN1 is not available on ENCORE database.

8 RBPs can affect the splicing of MKLN1 :

The Knockdown/knockout RNA-Seq assay for MKLN1 is not avaliable on ENCORE database.