KMT2C

General Information

Gene Name : KMT2C
Gene ID : ENSG00000055609.17
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: KMT2C)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	KMT2C	ENSG00000055609.17	17.46	15.79	16.62	ENCSR000AEF
HepG2	KMT2C	ENSG00000055609.17	7.35	8.09	7.72	ENCSR985KAT
K562	KMT2C	ENSG00000055609.17	19.72	18.22	18.97	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for KMT2C is not avaliable on ENCORE database.

Proteins bound to RNA

KMT2C RNA is bound by 60 proteins.

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eCLIP assay for KMT2C is not avaliable on ENCORE database.

60 proteins are bound to KMT2C RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr7	152004197	152004303	-	intron-Distal	6.92354	109.49534	K562	PTBP1
chr7	152052152	152052214	-	intron-Distal	7.00403	71.21807	K562	HNRNPL
chr7	152055674	152055757	-	CDS,intron-Distal	4.10184	49.37818	K562	ZNF622
chr7	152052214	152052244	-	intron-Distal	7.27430	47.86784	K562	HNRNPL
chr7	151833124	151833224	-	3'-UTR,intron-Distal	4.20761	45.02797	K562	PUM2
chr7	151860073	151860195	-	3'-UTR,CDS,intron-Distal	3.62520	31.94313	K562	ZNF622
chr7	151832750	151832829	-	3'-UTR,intron-Distal	4.46262	30.42125	K562	PUM2
chr7	151859371	151859444	-	3'-UTR,CDS,intron-Distal	4.47443	29.93155	K562	UCHL5
chr7	151859357	151859448	-	3'-UTR,CDS,intron-Distal	4.10470	27.19459	K562	ZNF622
chr7	151860083	151860194	-	3'-UTR,CDS,intron-Distal	3.69066	26.63047	K562	UCHL5
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 562 entries

eCLIP assay for KMT2C is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for KMT2C is not available on ENCORE database.
114 RBPs can affect the levels of KMT2C.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for KMT2C is not available on ENCORE database.

114 RBPs can affect the gene expression of KMT2C :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
KMT2C	ENSG00000055609.13	2442.28860	1186.08740	1.04190	44.70830	43.02700	HepG2	SRSF9
KMT2C	ENSG00000055609.13	5543.84550	2022.66380	1.45450	43.34850	40.80440	HepG2	U2AF1
KMT2C	ENSG00000055609.13	8551.73160	3834.09950	1.15720	38.43330	36.28600	K562	HNRNPC
KMT2C	ENSG00000055609.13	9730.49310	4778.14510	1.02600	36.57800	33.77370	K562	U2AF2
KMT2C	ENSG00000055609.13	2949.74140	1452.82770	1.02160	32.11440	30.35730	HepG2	QKI
KMT2C	ENSG00000055609.13	2343.51260	1381.57960	0.76230	25.80100	24.07510	HepG2	SLBP
KMT2C	ENSG00000055609.13	3871.72280	2350.24310	0.72010	24.88890	23.39620	HepG2	ETF1
KMT2C	ENSG00000055609.13	3468.32570	2218.74410	0.64440	22.13980	21.07600	HepG2	SRFBP1
KMT2C	ENSG00000055609.13	2669.16210	1318.59540	1.01730	22.73200	20.91200	HepG2	RBM25
KMT2C	ENSG00000055609.13	2354.30380	1422.69040	0.72660	20.38430	18.89670	HepG2	SRSF5
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 130 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for KMT2C is not available on ENCORE database.

15 RBPs can affect the splicing of KMT2C :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A3SS	KMT2C	ENSG00000055609.13	chr7	-	151853289	151853431			151853289	151853359	151854845	151855010	-0.51500	0.00000	0.00000	shorter	K562	U2AF2
A3SS	KMT2C	ENSG00000055609.13	chr7	-	151836759	151836960			151836759	151836876	151841797	151842009	0.19700	0.00000	0.00000	longer	K562	AQR
A3SS	KMT2C	ENSG00000055609.13	chr7	-	151835880	151836088			151835880	151835989	151836270	151836473	0.17100	0.00000	0.00000	longer	K562	AQR
A3SS	KMT2C	ENSG00000055609.13	chr7	-	151853289	151853431			151853289	151853359	151854845	151854907	-0.79300	0.00000	0.00000	shorter	HepG2	U2AF1
A3SS	KMT2C	ENSG00000055609.13	chr7	-	151853289	151853431			151853289	151853359	151854845	151854970	-0.61900	0.00000	0.00000	shorter	K562	U2AF1
MXE	KMT2C	ENSG00000055609.13	chr7	-	151854845	151855010	151855947	151856157	151853289	151853359	151859201	151860419	-0.25800	0.00000	0.00001	2included	K562	U2AF1
SE	KMT2C	ENSG00000055609.13	chr7	-	151866270	151866334			151864230	151864463	151868348	151868427	-0.18300	0.00001	0.00012	excluded	K562	AQR
A3SS	KMT2C	ENSG00000055609.13	chr7	-	151854845	151855010			151854845	151854939	151855947	151856157	-0.52400	0.00001	0.00869	shorter	HepG2	TBRG4
A3SS	KMT2C	ENSG00000055609.13	chr7	-	151853289	151853431			151853289	151853359	151854845	151855010	-0.47200	0.00002	0.00104	shorter	HepG2	U2AF2
MXE	KMT2C	ENSG00000055609.13	chr7	-	151853289	151853359	151854845	151854939	151852994	151853142	151855947	151856157	-0.14700	0.00002	0.00071	2included	K562	U2AF2

Showing 1 to 10 of 35 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

KMT2C

General Information

Functions

Localization

Domains (AlphaFold: KMT2C)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for KMT2C is not avaliable on ENCORE database.

60 proteins are bound to KMT2C RNA:

eCLIP assay for KMT2C is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for KMT2C is not available on ENCORE database.

114 RBPs can affect the gene expression of KMT2C :

The Knockdown/knockout RNA-Seq assay for KMT2C is not available on ENCORE database.

15 RBPs can affect the splicing of KMT2C :

The Knockdown/knockout RNA-Seq assay for KMT2C is not avaliable on ENCORE database.