KIF4A

General Information

Gene Name : KIF4A
Gene ID : ENSG00000090889.11
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: KIF4A)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	KIF4A	ENSG00000090889.11	15.16	15.67	15.41	ENCSR000AEF
HepG2	KIF4A	ENSG00000090889.11	23.15	32.48	27.81	ENCSR985KAT
K562	KIF4A	ENSG00000090889.11	26.60	28.24	27.42	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for KIF4A is not avaliable on ENCORE database.

Proteins bound to RNA

KIF4A RNA is bound by 12 proteins.

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eCLIP assay for KIF4A is not avaliable on ENCORE database.

12 proteins are bound to KIF4A RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chrX	69510836	69510918	+	intron-Distal	5.19058	10.28433	K562	KHSRP
chrX	69522697	69522853	+	intron-Distal	4.12057	7.56258	HepG2	QKI
chrX	69521744	69521772	+	CDS,intron-Proximal	4.00559	7.40409	K562	BUD13
chrX	69615613	69615643	+	CDS	4.35210	7.16955	K562	UCHL5
chrX	69579284	69579360	+	intron-Distal	5.10060	6.95895	K562	PTBP1
chrX	69578220	69578331	+	intron-Distal	5.26157	6.95895	K562	PTBP1
chrX	69530195	69530326	+	intron-Distal	4.54634	6.27552	K562	KHSRP
chrX	69594055	69594102	+	CDS	3.44591	6.02988	K562	UCHL5
chrX	69532768	69532848	+	intron-Distal	4.62642	5.91698	K562	KHSRP
chrX	69626188	69626255	+	CDS,intron-Proximal	3.35334	5.81258	K562	AQR
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 25 entries

eCLIP assay for KIF4A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for KIF4A is not available on ENCORE database.
163 RBPs can affect the levels of KIF4A.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for KIF4A is not available on ENCORE database.

163 RBPs can affect the gene expression of KIF4A :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
KIF4A	ENSG00000090889.10	244.44320	1639.89230	-2.74600	161.12780	158.83740	HepG2	SRFBP1
KIF4A	ENSG00000090889.10	188.91080	1451.91760	-2.94220	135.15250	132.67800	HepG2	RBM22
KIF4A	ENSG00000090889.10	33.33970	1045.86930	-4.97130	102.10830	99.74030	HepG2	BOP1
KIF4A	ENSG00000090889.10	160.13090	1090.37050	-2.76750	98.99690	96.83130	HepG2	TIAL1
KIF4A	ENSG00000090889.10	122.15820	1094.82220	-3.16390	98.27900	95.75750	HepG2	RPLP0
KIF4A	ENSG00000090889.10	34.89410	619.15210	-4.14920	81.54230	78.85760	HepG2	EIF2S1
KIF4A	ENSG00000090889.10	113.06730	1032.51380	-3.19090	80.76220	78.21540	HepG2	SUPV3L1
KIF4A	ENSG00000090889.10	502.07030	1737.12480	-1.79070	79.86100	77.48440	HepG2	ETF1
KIF4A	ENSG00000090889.10	60.61770	911.70890	-3.91080	75.58680	73.75370	HepG2	ZNF622
KIF4A	ENSG00000090889.10	325.01030	1100.16880	-1.75920	64.29940	62.08220	HepG2	TRIM56
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 180 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for KIF4A is not available on ENCORE database.

6 RBPs can affect the splicing of KIF4A :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	KIF4A	ENSG00000090889.10	chrX	+	69572449	69572506			69563726	69563832	69573471	69573657	-0.22500	0.00000	0.00000	excluded	K562	SF3B4
SE	KIF4A	ENSG00000090889.10	chrX	+	69572449	69572506			69563726	69563832	69573471	69573657	-0.16700	0.00000	0.00000	excluded	K562	AQR
A3SS	KIF4A	ENSG00000090889.10	chrX	+	69615766	69615899			69615798	69615899	69615520	69615676	0.11600	0.00000	0.00000	longer	K562	AQR
A5SS	KIF4A	ENSG00000090889.10	chrX	+	69626026	69626251			69626026	69626204	69626742	69626925	0.05300	0.00000	0.00000	longer	K562	AQR
SE	KIF4A	ENSG00000090889.10	chrX	+	69626108	69626204			69625677	69625755	69626742	69626925	-0.20600	0.00001	0.00031	excluded	HepG2	U2AF1
SE	KIF4A	ENSG00000090889.10	chrX	+	69549254	69549371			69522153	69522248	69550006	69550182	-0.06000	0.00006	0.00113	excluded	K562	AQR
SE	KIF4A	ENSG00000090889.10	chrX	+	69516847	69517038			69510603	69510655	69521749	69521916	-0.14700	0.00023	0.00351	excluded	K562	AQR
SE	KIF4A	ENSG00000090889.10	chrX	+	69624564	69624672			69623713	69623884	69625677	69625755	-0.07100	0.00065	0.02687	excluded	K562	TARDBP
SE	KIF4A	ENSG00000090889.10	chrX	+	69549254	69549371			69522153	69522248	69550006	69550182	-0.07500	0.00098	0.02052	excluded	K562	SF3B4
MXE	KIF4A	ENSG00000090889.10	chrX	+	69626108	69626204	69626742	69626925	69625677	69625755	69637737	69637854	0.14900	0.00110	0.04573	1included	K562	FXR1

Showing 1 to 10 of 15 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

KIF4A

General Information

Functions

Localization

Domains (AlphaFold: KIF4A)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for KIF4A is not avaliable on ENCORE database.

12 proteins are bound to KIF4A RNA:

eCLIP assay for KIF4A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for KIF4A is not available on ENCORE database.

163 RBPs can affect the gene expression of KIF4A :

The Knockdown/knockout RNA-Seq assay for KIF4A is not available on ENCORE database.

6 RBPs can affect the splicing of KIF4A :

The Knockdown/knockout RNA-Seq assay for KIF4A is not avaliable on ENCORE database.