GAK

General Information

Gene Name : GAK
Gene ID : ENSG00000178950.16
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: GAK)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	GAK	ENSG00000178950.16	5.89	13.74	9.81	ENCSR000AEF
HepG2	GAK	ENSG00000178950.16	27.59	9.31	18.45	ENCSR985KAT
K562	GAK	ENSG00000178950.16	27.60	10.89	19.25	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for GAK is not avaliable on ENCORE database.

Proteins bound to RNA

GAK RNA is bound by 69 proteins.

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eCLIP assay for GAK is not avaliable on ENCORE database.

69 proteins are bound to GAK RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr4	881136	881238	-	intron-Distal	8.16220	118.14848	K562	EIF4G2
chr4	881318	881357	-	intron-Distal	9.00608	110.93264	K562	EIF4G2
chr4	880740	880855	-	intron-Distal	8.82410	89.11399	K562	EIF4G2
chr4	881296	881373	-	intron-Distal	9.01581	66.35464	K562	AATF
chr4	881299	881318	-	intron-Distal	8.27013	61.75212	K562	EIF4G2
chr4	881357	881398	-	intron-Distal	6.62664	61.13529	K562	EIF4G2
chr4	881458	881493	-	intron-Distal	8.22995	60.23388	K562	EIF4G2
chr4	881443	881458	-	intron-Distal	8.18862	59.72785	K562	EIF4G2
chr4	881069	881132	-	intron-Distal	8.28301	57.70405	K562	EIF4G2
chr4	880777	880904	-	intron-Distal	7.79885	56.19979	K562	AATF
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 603 entries

eCLIP assay for GAK is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for GAK is not available on ENCORE database.
109 RBPs can affect the levels of GAK.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for GAK is not available on ENCORE database.

109 RBPs can affect the gene expression of GAK :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
GAK	ENSG00000178950.12	1842.68380	824.04470	1.16090	39.66840	37.92710	HepG2	SF3B4
GAK	ENSG00000178950.12	1595.42940	842.79200	0.92060	31.59890	30.04110	HepG2	PUM1
GAK	ENSG00000178950.12	1865.40360	793.94740	1.23230	29.51040	27.84020	HepG2	PUF60
GAK	ENSG00000178950.12	2526.73770	1582.98660	0.67450	24.59230	23.36920	HepG2	ZNF622
GAK	ENSG00000178950.12	1485.28810	791.55640	0.90790	20.75750	19.52580	HepG2	PTBP1
GAK	ENSG00000178950.12	1570.78270	880.89490	0.83430	20.23050	19.02720	HepG2	NELFE
GAK	ENSG00000178950.12	1941.50580	1226.71990	0.66230	19.29780	17.89240	HepG2	CKAP4
GAK	ENSG00000178950.12	1580.60490	842.18770	0.90820	18.59560	16.95330	HepG2	PUM2
GAK	ENSG00000178950.12	1234.03320	532.11060	1.21350	17.63540	16.37310	HepG2	TRIM56
GAK	ENSG00000178950.12	950.68720	483.33540	0.97580	17.57900	16.15680	HepG2	SAFB2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 117 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for GAK is not available on ENCORE database.

27 RBPs can affect the splicing of GAK :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	GAK	ENSG00000178950.12	chr4	-	845537	845762	844723	844872	853393	853510	-0.26000	0.00004	excluded	K562	AKAP8L
SE	GAK	ENSG00000178950.12	chr4	-	890247	890337	887661	887797	891820	891946	-0.25200	0.00000	excluded	HepG2	SRSF7
SE	GAK	ENSG00000178950.12	chr4	-	845537	845762	844723	844872	853393	853510	-0.34300	0.00000	excluded	K562	PUS1
SE	GAK	ENSG00000178950.12	chr4	-	862326	862473	860743	861220	864498	864692	-0.31300	0.00000	excluded	HepG2	SRSF1
SE	GAK	ENSG00000178950.12	chr4	-	871137	871266	870877	870995	871402	871597	0.06800	0.00000	included	HepG2	SF3A3
SE	GAK	ENSG00000178950.12	chr4	-	890247	890337	887661	887797	891820	891946	-0.28200	0.00006	excluded	K562	SRSF7
SE	GAK	ENSG00000178950.12	chr4	-	845537	845762	844723	844872	853393	853510	-0.18600	0.00041	excluded	K562	UTP18
SE	GAK	ENSG00000178950.12	chr4	-	890247	890337	887661	887797	891820	891946	-0.26200	0.00003	excluded	K562	RBM15
SE	GAK	ENSG00000178950.12	chr4	-	853149	853281	845537	845762	853393	853510	0.11900	0.00000	included	K562	AGGF1
SE	GAK	ENSG00000178950.12	chr4	-	890247	890337	887661	887797	891820	891946	-0.31500	0.00000	excluded	K562	AGGF1

Showing 1 to 10 of 65 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

GAK

General Information

Functions

Localization

Domains (AlphaFold: GAK)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for GAK is not avaliable on ENCORE database.

69 proteins are bound to GAK RNA:

eCLIP assay for GAK is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for GAK is not available on ENCORE database.

109 RBPs can affect the gene expression of GAK :

The Knockdown/knockout RNA-Seq assay for GAK is not available on ENCORE database.

27 RBPs can affect the splicing of GAK :

The Knockdown/knockout RNA-Seq assay for GAK is not avaliable on ENCORE database.