BAZ1B

General Information

Gene Name : BAZ1B
Gene ID : ENSG00000009954.10
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: BAZ1B)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	BAZ1B	ENSG00000009954.10	51.75	50.23	50.99	ENCSR000AEF
HepG2	BAZ1B	ENSG00000009954.10	37.05	53.30	45.17	ENCSR985KAT
K562	BAZ1B	ENSG00000009954.10	68.15	74.19	71.17	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for BAZ1B is not avaliable on ENCORE database.

Proteins bound to RNA

BAZ1B RNA is bound by 44 proteins.

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eCLIP assay for BAZ1B is not avaliable on ENCORE database.

44 proteins are bound to BAZ1B RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr7	72855530	72855605	-	3'-UTR,intron-Distal	4.58537	73.48998	K562	PUM2
chr7	72891931	72891980	-	CDS,intron-Distal	6.90243	58.73292	K562	UCHL5
chr7	72891980	72892014	-	CDS,intron-Distal	5.53486	56.95347	K562	UCHL5
chr7	72891200	72891352	-	CDS,intron-Distal	4.19205	55.56681	K562	UCHL5
chr7	72912907	72913025	-	CDS,intron-Distal	4.04520	51.95526	K562	UCHL5
chr7	72892015	72892091	-	CDS,intron-Distal	4.58683	49.14232	K562	UCHL5
chr7	72891442	72891580	-	CDS,intron-Distal	3.62636	42.94943	K562	UCHL5
chr7	72891950	72892016	-	CDS,intron-Distal	4.69092	40.32608	K562	ZNF622
chr7	72912935	72913008	-	CDS,intron-Distal	4.14414	37.38301	K562	ZNF622
chr7	72891217	72891322	-	CDS,intron-Distal	4.63671	37.30790	K562	ZNF622
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 324 entries

eCLIP assay for BAZ1B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for BAZ1B is not available on ENCORE database.
122 RBPs can affect the levels of BAZ1B.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for BAZ1B is not available on ENCORE database.

122 RBPs can affect the gene expression of BAZ1B :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
BAZ1B	ENSG00000009954.6	1595.43140	3288.60150	-1.04350	52.81530	50.83530	HepG2	PUS1
BAZ1B	ENSG00000009954.6	1945.66110	3534.61990	-0.86130	42.73180	40.48770	HepG2	HNRNPL
BAZ1B	ENSG00000009954.6	1855.79500	3566.37960	-0.94240	36.48410	33.87420	HepG2	HNRNPA2B1
BAZ1B	ENSG00000009954.6	1241.96590	3065.27860	-1.30340	23.36810	21.46540	HepG2	DDX55
BAZ1B	ENSG00000009954.6	2390.90080	5006.05620	-1.06610	22.95230	21.42100	HepG2	HNRNPLL
BAZ1B	ENSG00000009954.6	1639.09440	2684.13560	-0.71160	21.89430	20.49810	HepG2	TRIM56
BAZ1B	ENSG00000009954.6	2324.44200	4627.54330	-0.99340	21.33760	19.65680	HepG2	CPSF6
BAZ1B	ENSG00000009954.6	2161.10890	3227.88120	-0.57880	19.88520	18.46460	HepG2	CKAP4
BAZ1B	ENSG00000009954.6	3008.82860	4223.96340	-0.48940	17.58060	16.49660	HepG2	ZNF622
BAZ1B	ENSG00000009954.6	2912.27700	4515.53880	-0.63280	17.14690	16.08130	HepG2	RBM22
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 147 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for BAZ1B is not available on ENCORE database.

6 RBPs can affect the splicing of BAZ1B :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	BAZ1B	ENSG00000009954.6	chr7	-	72891197	72892899			72884674	72884813	72903523	72903721	-0.06700	0.00000	0.00000	excluded	K562	PUS1
A3SS	BAZ1B	ENSG00000009954.6	chr7	-	72873865	72874074			72873865	72874048	72877251	72877468	0.05700	0.00000	0.00000	longer	K562	AQR
A3SS	BAZ1B	ENSG00000009954.6	chr7	-	72903523	72903751			72903523	72903721	72907129	72907351	0.16700	0.00000	0.00000	longer	K562	AQR
A3SS	BAZ1B	ENSG00000009954.6	chr7	-	72879768	72879895			72879768	72879867	72880625	72880731	0.10000	0.00000	0.00000	longer	K562	AQR
A3SS	BAZ1B	ENSG00000009954.6	chr7	-	72858325	72858555			72858325	72858459	72861593	72861809	0.15100	0.00000	0.00000	longer	K562	AQR
A3SS	BAZ1B	ENSG00000009954.6	chr7	-	72884674	72884864			72884674	72884813	72891197	72892899	0.06900	0.00000	0.00000	longer	K562	AQR
MXE	BAZ1B	ENSG00000009954.6	chr7	-	72891197	72892899	72903523	72903751	72884674	72884813	72907129	72907251	0.10600	0.00000	0.00000	1included	K562	AQR
MXE	BAZ1B	ENSG00000009954.6	chr7	-	72863929	72864019	72865176	72865324	72861593	72861709	72873865	72874048	-0.05800	0.00000	0.00000	2included	K562	AQR
SE	BAZ1B	ENSG00000009954.6	chr7	-	72865176	72865383			72863871	72864019	72873865	72874048	-0.05400	0.00005	0.00100	excluded	K562	AQR
MXE	BAZ1B	ENSG00000009954.6	chr7	-	72891197	72892899	72903523	72903721	72884674	72884813	72907129	72907251	-0.11900	0.00032	0.06380	2included	K562	UTP3

Showing 1 to 10 of 13 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

BAZ1B

General Information

Functions

Localization

Domains (AlphaFold: BAZ1B)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for BAZ1B is not avaliable on ENCORE database.

44 proteins are bound to BAZ1B RNA:

eCLIP assay for BAZ1B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for BAZ1B is not available on ENCORE database.

122 RBPs can affect the gene expression of BAZ1B :

The Knockdown/knockout RNA-Seq assay for BAZ1B is not available on ENCORE database.

6 RBPs can affect the splicing of BAZ1B :

The Knockdown/knockout RNA-Seq assay for BAZ1B is not avaliable on ENCORE database.