ACSF2

General Information

Gene Name : ACSF2
Gene ID : ENSG00000167107.12
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ACSF2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ACSF2	ENSG00000167107.12	9.76	14.23	12.00	ENCSR000AEF
HepG2	ACSF2	ENSG00000167107.12	78.25	60.72	69.48	ENCSR985KAT
K562	ACSF2	ENSG00000167107.12	2.14	3.66	2.90	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ACSF2 is not avaliable on ENCORE database.

Proteins bound to RNA

ACSF2 RNA is bound by 30 proteins.

CanvasJS.com

eCLIP assay for ACSF2 is not avaliable on ENCORE database.

30 proteins are bound to ACSF2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	48548352	48548377	+	intron-Proximal	6.54180	26.38526	HepG2	SF3B4
chr17	48548335	48548352	+	intron-Proximal	6.51004	25.58242	HepG2	SF3B4
chr17	48547167	48547235	+	intron-Distal	3.99946	17.97486	HepG2	CSTF2T
chr17	48540101	48540189	+	intron-Distal	5.04574	16.92155	HepG2	HNRNPK
chr17	48540662	48540722	+	intron-Proximal	5.61109	15.28751	HepG2	EFTUD2
chr17	48540772	48540826	+	3'-UTR,CDS	4.27871	12.58825	HepG2	PPIG
chr17	48538753	48538818	+	intron-Distal,intron-Proximal	4.80373	12.45560	HepG2	EFTUD2
chr17	48504220	48504342	+	CDS,intron-Distal,intron-Proximal	3.56615	12.25329	HepG2	QKI
chr17	48538610	48538671	+	3'-UTR,CDS,intron-Distal,intron-Proximal	4.74564	11.99167	HepG2	PPIG
chr17	48541535	48541593	+	3'-UTR,CDS,intron-Proximal	4.35347	11.96699	HepG2	SF3A3
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 96 entries

eCLIP assay for ACSF2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ACSF2 is not available on ENCORE database.
132 RBPs can affect the levels of ACSF2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ACSF2 is not available on ENCORE database.

132 RBPs can affect the gene expression of ACSF2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ACSF2	ENSG00000167107.8	669.92260	2320.68170	-1.79250	108.59650	106.60230	HepG2	SRFBP1
ACSF2	ENSG00000167107.8	683.92200	2054.69140	-1.58700	63.86300	62.02220	HepG2	RBM22
ACSF2	ENSG00000167107.8	936.03990	2289.27690	-1.29030	58.62670	57.08270	HepG2	SRSF1
ACSF2	ENSG00000167107.8	601.96740	2452.57910	-2.02650	48.68730	46.87910	HepG2	AKAP1
ACSF2	ENSG00000167107.8	448.38790	1670.36400	-1.89730	40.33790	38.09400	HepG2	FIP1L1
ACSF2	ENSG00000167107.8	453.12850	1428.76990	-1.65680	37.04910	34.69550	HepG2	U2AF1
ACSF2	ENSG00000167107.8	920.99550	1862.42350	-1.01590	35.95370	34.39220	HepG2	SRSF9
ACSF2	ENSG00000167107.8	2644.49320	1203.53000	1.13560	35.49460	34.07340	HepG2	TIAL1
ACSF2	ENSG00000167107.8	2599.05120	1439.00960	0.85280	32.46470	30.78230	HepG2	PUS1
ACSF2	ENSG00000167107.8	551.18410	1226.13810	-1.15350	31.93980	30.24940	HepG2	UTP3
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 157 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ACSF2 is not available on ENCORE database.

17 RBPs can affect the splicing of ACSF2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	ACSF2	ENSG00000167107.8	chr17	+	48541886	48541960	48541578	48541655	48548388	48548761	0.47000	0.00000	included	HepG2	RBM22
SE	ACSF2	ENSG00000167107.8	chr17	+	48549788	48549940	48548388	48548496	48551025	48551167	-0.22100	0.00000	excluded	HepG2	RBM22
SE	ACSF2	ENSG00000167107.8	chr17	+	48541886	48541960	48541578	48541655	48548388	48548761	-0.14200	0.00108	excluded	HepG2	PRPF8
SE	ACSF2	ENSG00000167107.8	chr17	+	48541886	48541960	48541578	48541655	48548388	48548761	0.37800	0.00000	included	HepG2	HNRNPK
SE	ACSF2	ENSG00000167107.8	chr17	+	48541886	48541960	48541578	48541655	48548388	48548761	-0.21900	0.00030	excluded	HepG2	DDX59
SE	ACSF2	ENSG00000167107.8	chr17	+	48549788	48549940	48548388	48548496	48551025	48551167	-0.23200	0.00000	excluded	HepG2	SRSF1
A5SS	ACSF2	ENSG00000167107.8	chr17	+	48538602	48538846	48538602	48538731	48538993	48539047	0.09900	0.00029	longer	HepG2	RBM22
A5SS	ACSF2	ENSG00000167107.8	chr17	+	48538602	48538846	48538602	48538731	48538993	48539047	0.13500	0.00000	longer	HepG2	HNRNPK
A5SS	ACSF2	ENSG00000167107.8	chr17	+	48538602	48538731	48538602	48538648	48538993	48539047	-0.22200	0.00004	shorter	HepG2	HNRNPK
A5SS	ACSF2	ENSG00000167107.8	chr17	+	48541608	48541789	48541608	48541655	48541886	48541960	0.36900	0.00000	longer	HepG2	FTO

Showing 1 to 10 of 27 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ACSF2

General Information

Functions

Localization

Domains (AlphaFold: ACSF2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ACSF2 is not avaliable on ENCORE database.

30 proteins are bound to ACSF2 RNA:

eCLIP assay for ACSF2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ACSF2 is not available on ENCORE database.

132 RBPs can affect the gene expression of ACSF2 :

The Knockdown/knockout RNA-Seq assay for ACSF2 is not available on ENCORE database.

17 RBPs can affect the splicing of ACSF2 :

The Knockdown/knockout RNA-Seq assay for ACSF2 is not avaliable on ENCORE database.