ZMAT2

General Information

Gene Name       : ZMAT2
Gene ID             : ENSG00000146007.10
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: ZMAT2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZMAT2ENSG00000146007.1084.9469.6277.28ENCSR000AEF
HepG2ZMAT2ENSG00000146007.1069.3388.2178.77ENCSR985KAT
K562ZMAT2ENSG00000146007.1073.9668.2571.10ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
ZMAT2Ribo-STAMP-293TshRNAZMAT2-BGRSLV05-67,ZMAT2-BGRSLV05-68NT-BGRSLV05-1,NT-BGRSLV05-2,SubmittedENCORE2


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZMAT2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZMAT2 RNA is bound by 22 proteins.  







eCLIP assay for ZMAT2 is not avaliable on ENCORE database.





22 proteins are bound to ZMAT2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr5140085464140085540+3'-UTR3.507645.53175K562FAM120A
chr5140085247140085336+3'-UTR,CDS3.022277.30215K562GRWD1
chr5140085870140085964+3'-UTR3.392946.48866K562UPF1
chr5140085848140085874+3'-UTR6.2020134.33605K562TARDBP
chr5140085282140085428+3'-UTR,CDS4.7534419.21290HepG2BCLAF1
chr5140086019140086080+3'-UTR5.146697.21253K562UPF1
chr5140085394140085414+3'-UTR3.889755.02854K562PABPC4
chr5140085884140085902+3'-UTR5.7733251.60414K562TARDBP
chr5140085902140085969+3'-UTR4.8936229.54462K562TARDBP
chr5140085414140085442+3'-UTR5.2334017.04758K562PABPC4
chr5140084123140084157+3'-UTR,CDS,intron-Proximal3.281205.33133K562BUD13
chr5140081591140081665+3'-UTR,CDS6.4810520.79576K562UCHL5
chr5140085638140085714+3'-UTR3.111794.08204K562PTBP1
chr5140085767140085844+3'-UTR3.928239.26230HepG2PCBP2
chr5140085355140085377+3'-UTR3.838058.82687K562UCHL5
chr5140085220140085258+3'-UTR,CDS3.186164.84084K562ZNF800
chr5140085442140085468+3'-UTR5.7163512.17370K562PABPC4
chr5140085481140085527+3'-UTR4.171143.31330K562UPF1
chr5140085264140085336+3'-UTR,CDS5.3260325.99878K562UCHL5
chr5140081599140081668+3'-UTR,CDS3.764828.37418K562GRWD1
chr5140085229140085379+3'-UTR,CDS5.2182314.74035K562PUM1
chr5140085268140085339+3'-UTR,CDS5.6933510.83900HepG2GRWD1
chr5140085265140085319+3'-UTR,CDS4.9068410.96138K562ZNF622
chr5140085339140085379+3'-UTR4.168496.15459HepG2GRWD1
chr5140086158140086217+3'-UTR5.6986914.25372K562PABPC4
chr5140085878140085948+3'-UTR3.9493312.47754K562EIF4G2
chr5140085804140085929+3'-UTR3.893236.42285HepG2AKAP1
chr5140085988140086063+3'-UTR6.4372649.25289K562TARDBP
chr5140085196140085227+3'-UTR,CDS,intron-Proximal5.1971015.23212K562UCHL5
chr5140084120140084161+3'-UTR,CDS,intron-Proximal3.620223.93645HepG2PPIG
chr5140084121140084156+3'-UTR,CDS5.1971016.39416K562UCHL5
chr5140085725140085843+3'-UTR3.742415.70297K562TIA1
chr5140085874140085884+3'-UTR5.9042041.30539K562TARDBP
chr5140085397140085461+3'-UTR4.454953.86870K562APOBEC3C
chr5140085725140085795+3'-UTR3.361693.57062K562IGF2BP1
chr5140085395140085444+3'-UTR3.9110410.20874K562TARDBP
chr5140085296140085434+3'-UTR,CDS3.460387.45062HepG2HLTF
chr5140084093140084157+3'-UTR,CDS,intron-Proximal4.645273.22248HepG2TRA2A
chr5140081605140081670+3'-UTR,CDS3.8029210.01989K562ZNF622
chr5140081594140081665+3'-UTR,CDS4.517697.73111HepG2GRWD1
chr5140085798140085941+3'-UTR3.684078.15141HepG2UPF1
chr5140080420140080489+5'-UTR,CDS3.1927911.47593K562ZNF622
chr5140080420140080492+5'-UTR,CDS4.2420513.25255K562UCHL5
chr5140080425140080477+5'-UTR,CDS3.992686.39499HepG2GRWD1
chr5140078422140078482+3'-UTR,intron-Proximal3.806603.02250K562YBX3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZMAT2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZMAT2 is not available on ENCORE database.

  • 80 RBPs can affect the levels of ZMAT2.  








The Knockdown/knockout RNA-Seq assay for ZMAT2 is not available on ENCORE database.





80 RBPs can affect the gene expression of ZMAT2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZMAT2ENSG00000146007.6749.590601460.11480-0.961908.404105.59310HepG2AARS
ZMAT2ENSG00000146007.61700.231001368.951300.312602.431401.42190HepG2AATF
ZMAT2ENSG00000146007.61706.768501505.868100.180601.823401.31120HepG2ACO1
ZMAT2ENSG00000146007.61937.309602266.75560-0.226602.591901.92440HepG2AUH
ZMAT2ENSG00000146007.61949.490501489.700700.388003.006302.02600HepG2BCCIP
ZMAT2ENSG00000146007.6981.995901709.85570-0.8001012.2730011.13500HepG2BOP1
ZMAT2ENSG00000146007.61895.407601052.568000.848506.820305.61980HepG2CNOT7
ZMAT2ENSG00000146007.6891.853301569.74330-0.8157011.268509.98520HepG2CPSF6
ZMAT2ENSG00000146007.61200.129002086.96250-0.798209.723008.65810HepG2CELF1
ZMAT2ENSG00000146007.61004.687401438.96510-0.518305.123703.78190HepG2DDX5
ZMAT2ENSG00000146007.61092.431801846.69160-0.757409.349908.29930HepG2EIF2S1
ZMAT2ENSG00000146007.61521.587601987.09270-0.385102.142401.53430HepG2EIF4B
ZMAT2ENSG00000146007.61622.084702213.77920-0.448704.066103.08650HepG2EIF4G1
ZMAT2ENSG00000146007.61486.842902120.58250-0.512203.291002.40650HepG2EIF4G2
ZMAT2ENSG00000146007.62072.020802602.51180-0.328905.154104.37930HepG2ETF1
ZMAT2ENSG00000146007.6853.596601327.08240-0.636608.134006.82260HepG2FUBP3
ZMAT2ENSG00000146007.61577.887402028.02190-0.362102.801701.90460HepG2G3BP2
ZMAT2ENSG00000146007.6641.63330946.57760-0.561004.679803.51080HepG2GEMIN5
ZMAT2ENSG00000146007.61422.541601708.98520-0.264702.713402.00270HepG2HNRNPF
ZMAT2ENSG00000146007.61574.557401934.48750-0.297002.187201.56080HepG2HNRNPK
ZMAT2ENSG00000146007.61417.783001941.56270-0.453603.869503.08330HepG2IGF2BP2
ZMAT2ENSG00000146007.61033.978501525.95160-0.5615011.184409.81790HepG2ILF2
ZMAT2ENSG00000146007.61535.862802059.97820-0.423603.514302.77460HepG2MAGOH
ZMAT2ENSG00000146007.61568.476602071.46730-0.401302.859502.21890HepG2MATR3
ZMAT2ENSG00000146007.6999.313801888.05200-0.9179012.9932011.45550HepG2PABPC4
ZMAT2ENSG00000146007.61523.306801954.41280-0.359505.319204.52130HepG2PCBP1
ZMAT2ENSG00000146007.6534.759301332.42270-1.3171038.6011036.11750HepG2PPIL4
ZMAT2ENSG00000146007.61016.412701431.24450-0.493807.921606.70040HepG2PRPF4
ZMAT2ENSG00000146007.61382.701201988.76320-0.524409.950409.03890HepG2PTBP1
ZMAT2ENSG00000146007.61662.567102254.65560-0.439504.102103.41040HepG2PUM1
ZMAT2ENSG00000146007.61684.247302252.90920-0.419703.847803.06020HepG2PUM2
ZMAT2ENSG00000146007.61711.693202153.71970-0.331403.747103.03690HepG2QKI
ZMAT2ENSG00000146007.62211.642301522.582100.538502.856702.14170HepG2RAVER1
ZMAT2ENSG00000146007.62834.976102175.223900.382106.064505.37070HepG2RBM22
ZMAT2ENSG00000146007.61259.302201954.69950-0.634309.601008.40090HepG2RBM25
ZMAT2ENSG00000146007.61004.981001968.47260-0.969903.121401.39740HepG2RBM39
ZMAT2ENSG00000146007.61726.513702213.24010-0.358305.254404.54730HepG2NELFE
ZMAT2ENSG00000146007.61720.426702061.44550-0.260903.072802.42770HepG2RECQL
ZMAT2ENSG00000146007.6731.619401118.02320-0.611804.514903.53990HepG2RRP9
ZMAT2ENSG00000146007.61050.231901330.34820-0.341104.558203.76510HepG2SAFB2
ZMAT2ENSG00000146007.6788.835601038.23370-0.396302.838601.88720HepG2SERBP1
ZMAT2ENSG00000146007.61965.166401563.057700.330201.902801.34080HepG2SF3A3
ZMAT2ENSG00000146007.61305.351601680.83240-0.364703.077602.33410HepG2SF3B1
ZMAT2ENSG00000146007.61509.870402070.42460-0.455505.790904.98860HepG2SF3B4
ZMAT2ENSG00000146007.61602.237602036.71080-0.346202.223601.58340HepG2SLBP
ZMAT2ENSG00000146007.61208.009702456.84530-1.0242042.9250041.56880HepG2SRFBP1
ZMAT2ENSG00000146007.62455.198102161.130000.184002.078501.65230HepG2SRSF1
ZMAT2ENSG00000146007.61205.818801808.57000-0.584804.924803.55640HepG2SRSF3
ZMAT2ENSG00000146007.61388.797101678.97830-0.273702.902302.19230HepG2SRSF7
ZMAT2ENSG00000146007.6882.578101305.46600-0.564804.033702.56370HepG2STAU1
ZMAT2ENSG00000146007.6973.030201319.78750-0.439704.580203.38700HepG2SUPT6H
ZMAT2ENSG00000146007.62337.432101942.660300.266802.961802.38410HepG2TAF15
ZMAT2ENSG00000146007.61247.542201655.14740-0.407903.635202.81840HepG2TARDBP
ZMAT2ENSG00000146007.61082.146601451.42060-0.423604.814004.19150HepG2TIAL1
ZMAT2ENSG00000146007.6656.346701464.58090-1.1580031.7877030.13530HepG2TRIM56
ZMAT2ENSG00000146007.61124.065202251.78100-1.002303.319902.23640HepG2U2AF2
ZMAT2ENSG00000146007.61860.801601338.315600.475409.228508.24030HepG2UTP3
ZMAT2ENSG00000146007.62184.020601625.930800.425607.500206.63130K562AGGF1
ZMAT2ENSG00000146007.61169.700601489.70130-0.348904.648103.38760K562BCLAF1
ZMAT2ENSG00000146007.61308.437901990.77360-0.605507.120505.70070K562BOP1
ZMAT2ENSG00000146007.61502.786402116.76940-0.494206.653405.43040K562CPSF6
ZMAT2ENSG00000146007.6842.266501130.16050-0.424204.590303.17740K562CSTF2
ZMAT2ENSG00000146007.62499.920903806.63100-0.6066011.820609.88690K562CELF1
ZMAT2ENSG00000146007.61643.410801907.46230-0.215001.963601.33920K562EIF2S2
ZMAT2ENSG00000146007.62499.213203096.13000-0.309003.961302.84100K562EIF4G2
ZMAT2ENSG00000146007.61706.682102153.75120-0.335702.757901.90530K562FMR1
ZMAT2ENSG00000146007.61249.814801825.49350-0.546605.433604.10520K562FTO
ZMAT2ENSG00000146007.61382.45520984.865200.489107.166306.25510K562FXR1
ZMAT2ENSG00000146007.61648.262402020.99850-0.294102.411601.66810K562GPKOW
ZMAT2ENSG00000146007.62567.302401811.428700.503004.631203.39800K562HNRNPM
ZMAT2ENSG00000146007.61181.997701558.76710-0.399202.626601.63630K562IGF2BP2
ZMAT2ENSG00000146007.61145.180601725.66840-0.591604.618803.37540K562KRR1
ZMAT2ENSG00000146007.61337.352901635.10970-0.290002.513901.63780K562MATR3
ZMAT2ENSG00000146007.61545.077801972.71810-0.352503.328402.36660K562METAP2
ZMAT2ENSG00000146007.61458.227001706.03200-0.226402.491301.72320K562MTPAP
ZMAT2ENSG00000146007.61686.664601895.60540-0.168502.024501.37450K562NSUN2
ZMAT2ENSG00000146007.62730.415003520.62820-0.366705.546304.16920K562PUM2
ZMAT2ENSG00000146007.62341.800101677.957800.480804.415603.75250K562PUS1
ZMAT2ENSG00000146007.61949.367301634.818800.253802.396801.83830K562RBM15
ZMAT2ENSG00000146007.61648.413301916.26180-0.217202.716601.78790K562SRPK2
ZMAT2ENSG00000146007.61146.518301473.68940-0.362202.789501.73590K562SRSF5
ZMAT2ENSG00000146007.61885.184502642.83640-0.487404.657802.95990K562STAU1
ZMAT2ENSG00000146007.61929.172501438.303100.423505.365404.21430K562SYNCRIP
ZMAT2ENSG00000146007.61217.381501523.44330-0.323602.924802.08070K562TIA1
ZMAT2ENSG00000146007.6805.958701157.89390-0.522702.727701.78960K562TRIM56
ZMAT2ENSG00000146007.62038.215602576.16680-0.337902.684701.33120K562TRIP6
ZMAT2ENSG00000146007.61003.287802009.94660-1.0024035.7193033.47890K562UPF1
ZMAT2ENSG00000146007.61428.541001719.85440-0.267702.196201.41670K562WDR3
ZMAT2ENSG00000146007.61527.726601788.40400-0.227302.727501.88650K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZMAT2 is not available on ENCORE database.





1 RBPs can affect the splicing of ZMAT2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSZMAT2ENSG00000146007.6chr5+1400834821400835761400835021400835761400815901400817140.114000.000000.00000longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZMAT2 is not avaliable on ENCORE database.