ZDHHC5

General Information

Gene Name       : ZDHHC5
Gene ID             : ENSG00000156599.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZDHHC5)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZDHHC5ENSG00000156599.1031.4139.0635.23ENCSR000AEF
HepG2ZDHHC5ENSG00000156599.1028.9626.6927.83ENCSR985KAT
K562ZDHHC5ENSG00000156599.1037.2143.1840.20ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
ZDHHC5Ribo-STAMP-293TshRNAZDHHC5-BGRSLV05-59,ZDHHC5-BGRSLV05-60NT-BGRSLV05-1,NT-BGRSLV05-2,SubmittedENCORE2


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZDHHC5 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZDHHC5 RNA is bound by 12 proteins.  







eCLIP assay for ZDHHC5 is not avaliable on ENCORE database.





12 proteins are bound to ZDHHC5 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr115746793757468008+3'-UTR3.413853.66308K562UPF1
chr115746820357468340+3'-UTR3.220973.73678HepG2UPF1
chr115746795057468019+3'-UTR4.824574.64560K562FAM120A
chr115744994657450000+5'-UTR,CDS,intron-Distal3.086836.13273K562YBX3
chr115743556157435629+5'-UTR4.1699110.34852HepG2DDX3X
chr115743964357439702+5'-UTR,intron-Distal3.506563.94979HepG2BCLAF1
chr115743973357439809+5'-UTR,intron-Distal4.197544.15208K562RBM15
chr115744014457440241+5'-UTR,intron-Distal3.673139.39478HepG2DDX3X
chr115743988357439945+5'-UTR,intron-Distal3.922594.09885HepG2BCLAF1
chr115743949857439570+5'-UTR,intron-Distal3.059404.03389K562ZNF622
chr115744992457450014+5'-UTR,CDS,intron-Distal3.944743.10765HepG2YBX3
chr115743562957435660+5'-UTR,intron-Proximal3.621788.58457HepG2DDX3X
chr115743949257439548+5'-UTR,intron-Distal,intron-Proximal3.299217.55931K562DDX3X
chr115744991457449946+5'-UTR,CDS,intron-Distal3.284403.69775K562YBX3
chr115744016157440224+5'-UTR,intron-Distal4.076077.03491K562RBM15
chr115746653357466593+CDS4.747316.54449K562RBM15
chr115746639257466460+CDS3.352764.47204HepG2IGF2BP1
chr115746646057466522+CDS3.792516.50645HepG2IGF2BP1
chr115746130757461380+CDS3.202323.12941K562UCHL5
chr115746434457464391+CDS,intron-Proximal3.475903.94787K562AQR
chr115746635257466364+CDS4.8782914.32403K562RBM15
chr115745776957457847+CDS,intron-Distal,intron-Proximal5.385418.43521K562AQR
chr115745610457456179+CDS,intron-Proximal4.548068.11807HepG2PRPF8
chr115746017257460210+CDS,intron-Proximal5.445568.88118K562AQR
chr115746607857466119+CDS3.813853.22721K562YBX3
chr115746636457466404+CDS5.0605316.95491K562RBM15
chr115746731457467374+CDS,intron-Proximal4.116076.01372K562AQR
chr115745768457457851+CDS,intron-Distal,intron-Proximal5.078208.16909HepG2AQR
chr115746122757461264+CDS,intron-Proximal4.033163.18234K562BUD13
chr115745748957457551+CDS,intron-Distal,intron-Proximal3.407393.26275K562BUD13
chr115746121057461283+CDS,intron-Proximal4.7329112.86643K562AQR
chr115746689157467002+intron-Distal,intron-Proximal4.663819.56266K562AQR
chr115746022257460329+intron-Distal,intron-Proximal4.337877.80986K562PRPF8
chr115746021057460290+intron-Distal,intron-Proximal5.9921112.06330K562AQR
chr115746730857467337+intron-Proximal4.073683.31283K562PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZDHHC5 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZDHHC5 is not available on ENCORE database.

  • 59 RBPs can affect the levels of ZDHHC5.  








The Knockdown/knockout RNA-Seq assay for ZDHHC5 is not available on ENCORE database.





59 RBPs can affect the gene expression of ZDHHC5 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZDHHC5ENSG00000156599.62731.307302085.383200.389202.729002.20040HepG2AKAP1
ZDHHC5ENSG00000156599.62983.363101303.828801.1941029.8094028.20650HepG2BOP1
ZDHHC5ENSG00000156599.6808.333201352.05550-0.7421014.3979012.89190HepG2DNAJC21
ZDHHC5ENSG00000156599.61509.687101034.805000.544805.247804.03130HepG2EIF3D
ZDHHC5ENSG00000156599.6986.761801823.05360-0.8856010.794309.55880HepG2EIF4A3
ZDHHC5ENSG00000156599.61468.278501811.89470-0.303403.833102.87730HepG2EIF4G1
ZDHHC5ENSG00000156599.63564.541702322.889500.6177017.4779016.17880HepG2ETF1
ZDHHC5ENSG00000156599.6627.540601513.88790-1.2705030.5651028.14400HepG2EWSR1
ZDHHC5ENSG00000156599.61067.822701290.75230-0.273502.058401.37210HepG2FUBP3
ZDHHC5ENSG00000156599.6919.191401356.84740-0.561804.780103.95350HepG2GPKOW
ZDHHC5ENSG00000156599.61340.921101673.02430-0.319204.963404.08110HepG2HNRNPL
ZDHHC5ENSG00000156599.61272.188601744.52440-0.455502.884101.85750HepG2KHSRP
ZDHHC5ENSG00000156599.62705.856502130.279500.344902.059801.35190HepG2LARP4
ZDHHC5ENSG00000156599.61473.411601083.047200.444002.285401.32750HepG2METAP2
ZDHHC5ENSG00000156599.61906.266801541.736200.306102.587401.80370HepG2MSI2
ZDHHC5ENSG00000156599.61336.813901686.65100-0.335402.209101.55840HepG2PABPC4
ZDHHC5ENSG00000156599.61810.276101492.934800.278003.367902.44220HepG2PARN
ZDHHC5ENSG00000156599.61109.313201452.52120-0.388905.197104.17200HepG2PRPF4
ZDHHC5ENSG00000156599.62737.771701845.441000.5689018.8797017.60970HepG2PUM1
ZDHHC5ENSG00000156599.62261.104101913.819300.240502.061701.30700HepG2RBM15
ZDHHC5ENSG00000156599.62295.128201941.518300.241302.378001.88780HepG2RBM22
ZDHHC5ENSG00000156599.62796.996402136.483900.388504.145003.33650HepG2RPLP0
ZDHHC5ENSG00000156599.61634.555001006.873000.6989010.829309.70900HepG2RPS19
ZDHHC5ENSG00000156599.61084.112501413.62760-0.382903.147401.99680HepG2RPS5
ZDHHC5ENSG00000156599.62591.298101980.850600.387502.037701.45790HepG2SF3A3
ZDHHC5ENSG00000156599.61647.738101281.649900.362403.031002.29340HepG2SF3B1
ZDHHC5ENSG00000156599.62713.199402192.895600.307105.380304.74520HepG2SRFBP1
ZDHHC5ENSG00000156599.62159.567701716.462200.331204.878104.08530HepG2SRSF5
ZDHHC5ENSG00000156599.62517.486201952.104000.366907.205406.28200HepG2SUCLG1
ZDHHC5ENSG00000156599.61082.240301350.74990-0.319702.057501.46120HepG2SUPV3L1
ZDHHC5ENSG00000156599.6953.116101656.69240-0.7976017.8053016.56050HepG2TAF15
ZDHHC5ENSG00000156599.61116.295701478.69980-0.405606.205805.42220HepG2TRIM56
ZDHHC5ENSG00000156599.62246.961601629.606300.463404.599703.79940HepG2U2AF1
ZDHHC5ENSG00000156599.6578.44050797.88860-0.464003.444402.60180HepG2UCHL5
ZDHHC5ENSG00000156599.61189.613401756.71410-0.5624012.1899010.91480HepG2UPF1
ZDHHC5ENSG00000156599.6824.787801236.71560-0.584404.133902.89590HepG2UPF2
ZDHHC5ENSG00000156599.62108.533201805.637900.223602.388301.40440HepG2UTP18
ZDHHC5ENSG00000156599.62127.926701696.034700.327204.881704.12390HepG2UTP3
ZDHHC5ENSG00000156599.6917.304401329.66690-0.535605.038904.06890HepG2XRN2
ZDHHC5ENSG00000156599.62995.480901932.045700.6326023.9796022.76650HepG2ZNF622
ZDHHC5ENSG00000156599.61976.149502298.31810-0.217902.535101.98700K562AGGF1
ZDHHC5ENSG00000156599.63870.457703220.903300.264902.519301.33790K562APOBEC3C
ZDHHC5ENSG00000156599.63917.635102804.227900.482305.484704.70760K562AQR
ZDHHC5ENSG00000156599.63208.651702841.089700.175401.906701.34710K562DDX47
ZDHHC5ENSG00000156599.62416.002401743.624700.470403.824602.58640K562EIF3D
ZDHHC5ENSG00000156599.61609.849701245.753400.369804.163703.19560K562EIF3G
ZDHHC5ENSG00000156599.64226.237003650.090100.211302.789101.84780K562EIF4G2
ZDHHC5ENSG00000156599.61083.438701435.25690-0.405703.007101.82240K562FKBP4
ZDHHC5ENSG00000156599.62446.872901353.884500.8537024.8664023.17340K562FXR1
ZDHHC5ENSG00000156599.63123.454503720.37260-0.252302.199101.52110K562GRSF1
ZDHHC5ENSG00000156599.62009.918002344.16840-0.221902.138101.35440K562HNRNPU
ZDHHC5ENSG00000156599.62279.653902590.94170-0.184702.797902.04760K562NSUN2
ZDHHC5ENSG00000156599.62097.189201584.794300.404103.594502.73900K562PRPF8
ZDHHC5ENSG00000156599.61953.706601581.007700.305302.891702.21560K562PTBP1
ZDHHC5ENSG00000156599.65182.594203982.638500.379804.555703.51180K562PUF60
ZDHHC5ENSG00000156599.61715.422902371.86480-0.467504.885004.18950K562PUS1
ZDHHC5ENSG00000156599.62398.667701974.056600.281002.449301.43460K562SAFB
ZDHHC5ENSG00000156599.61089.831001395.28200-0.356502.705001.45650K562SLBP
ZDHHC5ENSG00000156599.62898.160802222.220600.383005.019903.90700K562SYNCRIP
ZDHHC5ENSG00000156599.61931.537701568.610600.300202.193101.55870K562TARDBP
ZDHHC5ENSG00000156599.61189.911001514.62730-0.348102.795901.84330K562TRIM56
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZDHHC5 is not available on ENCORE database.





10 RBPs can affect the splicing of ZDHHC5 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZDHHC5ENSG00000156599.6chr11+574575025745790957455979574561375746008257460174-0.263000.000000.00001excludedK562SF3B4
SEZDHHC5ENSG00000156599.6chr11+574575025745790957455979574561375746008257460174-0.076000.000020.00046excludedK562AQR
SEZDHHC5ENSG00000156599.6chr11+574642325746434557463391574635155746603057466307-0.109000.000020.00034excludedK562AQR
SEZDHHC5ENSG00000156599.6chr11+574575025745790957455979574561375746008257460174-0.142000.000030.00250excludedHepG2SF3B4
SEZDHHC5ENSG00000156599.6chr11+574575025745790957455979574561375746008257460174-0.054000.002310.05112excludedK562RBM15
A3SSZDHHC5ENSG00000156599.6chr11+5746420657464345574642325746434557463391574635150.163000.000000.00000longerK562AQR
RIZDHHC5ENSG00000156599.6chr11+574575025745790957457502574576755745780657457909-0.085000.001130.06087excludedK562DROSHA
RIZDHHC5ENSG00000156599.6chr11+5745750257457909574575025745767557457806574579090.151000.000010.00031includedHepG2SF3A3
RIZDHHC5ENSG00000156599.6chr11+5745750257457909574575025745767557457806574579090.089000.002550.03119includedK562PRPF8
RIZDHHC5ENSG00000156599.6chr11+5745750257457909574575025745767557457806574579090.089000.001760.03539includedHepG2KHSRP
RIZDHHC5ENSG00000156599.6chr11+5745750257457909574575025745767557457806574579090.128000.000220.02695includedK562SERBP1
RIZDHHC5ENSG00000156599.6chr11+5745750257457909574575025745767557457806574579090.095000.000180.00217includedHepG2SF3B4
RIZDHHC5ENSG00000156599.6chr11+5745750257457909574575025745767557457806574579090.079000.003850.05581includedHepG2FUBP3
RIZDHHC5ENSG00000156599.6chr11+5745750257457909574575025745767557457806574579090.113000.000400.00586includedK562EFTUD2
MXEZDHHC5ENSG00000156599.6chr11+57461212574613875746339157463515574600825746017457464232574643450.056000.004400.032241includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZDHHC5 is not avaliable on ENCORE database.