U2AF1L4

General Information

Gene Name       : U2AF1L4
Gene ID             : ENSG00000161265.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: U2AF1L4)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878U2AF1L4ENSG00000161265.146.079.107.58ENCSR000AEF
HepG2U2AF1L4ENSG00000161265.149.319.299.30ENCSR985KAT
K562U2AF1L4ENSG00000161265.1410.3711.2410.80ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
U2AF1L4Ribo-STAMP-293TshRNABGRSLV02-63,BGRSLV02-64BGRSLV02-1,BGRSLV02-2NotSatisfiedENCORE2
U2AF1L4Ribo-STAMP-293TshRNAU2AF1L4-BGRSLV05-31,U2AF1L4-BGRSLV05-32NT-BGRSLV05-1,NT-BGRSLV05-2,SubmittedENCORE2


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for U2AF1L4 is not avaliable on ENCORE database.



Proteins bound to RNA
  • U2AF1L4 RNA is bound by 5 proteins.  







eCLIP assay for U2AF1L4 is not avaliable on ENCORE database.





5 proteins are bound to U2AF1L4 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr193623531436235376-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal6.8887514.14161HepG2SF3A3
chr193623530636235372-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal5.0986411.02762K562SF3B4
chr193623531636235386-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal5.402488.37417HepG2SF3B4
chr193623523936235355-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.577465.02679K562BUD13
chr193623471136234764-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.723453.32039HepG2PPIG
chr193623521536235242-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.483403.95301K562ZNF622
chr193623496836235049-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.667216.47139HepG2PPIG
chr193623522036235292-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.413865.80295HepG2PPIG
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for U2AF1L4 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for U2AF1L4 is not available on ENCORE database.

  • 64 RBPs can affect the levels of U2AF1L4.  








The Knockdown/knockout RNA-Seq assay for U2AF1L4 is not available on ENCORE database.





64 RBPs can affect the gene expression of U2AF1L4 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
U2AF1L4ENSG00000161265.10123.2391065.706900.907203.005002.18760HepG2ASCC1
U2AF1L4ENSG00000161265.10115.5286062.427700.887902.770801.99800HepG2CIRBP
U2AF1L4ENSG00000161265.10187.81900101.227900.891605.316304.44950HepG2CKAP4
U2AF1L4ENSG00000161265.10137.1544089.537100.615101.962801.37910HepG2DDX21
U2AF1L4ENSG00000161265.10138.2744076.065900.862102.931202.28950HepG2DDX3X
U2AF1L4ENSG00000161265.10106.6089065.367300.705601.813801.30320HepG2DDX6
U2AF1L4ENSG00000161265.10181.1936096.874300.903204.720203.87830HepG2DKC1
U2AF1L4ENSG00000161265.10140.8464062.814301.164904.798604.02970HepG2EIF2S1
U2AF1L4ENSG00000161265.10206.58450138.666600.575002.391401.30550HepG2EIF2S2
U2AF1L4ENSG00000161265.10168.7451069.405101.281606.412705.43960HepG2EIF4A3
U2AF1L4ENSG00000161265.10152.3865067.598601.172604.354603.50270HepG2EIF4B
U2AF1L4ENSG00000161265.10309.37850199.519700.632704.116403.40810HepG2ETF1
U2AF1L4ENSG00000161265.10149.8707066.418701.174005.544104.44210HepG2FUBP3
U2AF1L4ENSG00000161265.10160.5052070.063301.195805.545404.58890HepG2FXR1
U2AF1L4ENSG00000161265.10228.4816064.974801.8140014.0348012.59730HepG2G3BP1
U2AF1L4ENSG00000161265.10128.0786069.004200.892203.037502.10410HepG2G3BP2
U2AF1L4ENSG00000161265.10203.5306091.707501.150006.532405.60060HepG2HNRNPA1
U2AF1L4ENSG00000161265.10194.2571065.837701.560909.458308.22900HepG2HNRNPK
U2AF1L4ENSG00000161265.10278.91160163.798000.767804.085503.33620HepG2HNRNPLL
U2AF1L4ENSG00000161265.10143.4433066.038601.119003.760602.98360HepG2IGF2BP2
U2AF1L4ENSG00000161265.10150.45640103.508900.539502.232801.56600HepG2ILF2
U2AF1L4ENSG00000161265.10135.8948066.436401.032303.573702.41530HepG2KHSRP
U2AF1L4ENSG00000161265.10188.7907070.087901.429408.163407.04800HepG2MAGOH
U2AF1L4ENSG00000161265.10168.9897072.129501.228205.749204.85120HepG2NCBP2
U2AF1L4ENSG00000161265.10136.8091064.213901.091104.430503.52990HepG2PABPC4
U2AF1L4ENSG00000161265.10161.12110100.302400.683702.936202.06670HepG2PARN
U2AF1L4ENSG00000161265.10117.2146070.476700.733802.593802.00130HepG2PCBP1
U2AF1L4ENSG00000161265.10151.8897071.715201.082605.502804.78620HepG2PTBP1
U2AF1L4ENSG00000161265.10185.90850103.136500.849904.834204.06210HepG2PUS1
U2AF1L4ENSG00000161265.10163.2091077.664001.071305.238804.41980HepG2QKI
U2AF1L4ENSG00000161265.1044.8454085.54460-0.931702.001301.39200HepG2RAVER1
U2AF1L4ENSG00000161265.10152.8871070.487101.116905.404704.49120HepG2RBM25
U2AF1L4ENSG00000161265.10152.5440079.810000.934504.043203.41170HepG2NELFE
U2AF1L4ENSG00000161265.10118.0937074.336000.667702.074101.53040HepG2RECQL
U2AF1L4ENSG00000161265.10151.6452091.418400.730002.067801.53000HepG2RPS19
U2AF1L4ENSG00000161265.10139.8354090.241800.631802.412901.80530HepG2SAFB2
U2AF1L4ENSG00000161265.10162.3455074.660301.120605.784204.98250HepG2SF3B4
U2AF1L4ENSG00000161265.10157.38890105.236800.580602.429101.82100HepG2SMN1
U2AF1L4ENSG00000161265.10111.04730188.34560-0.762203.650403.09920HepG2SRFBP1
U2AF1L4ENSG00000161265.10139.0941077.931000.835703.190402.69210HepG2SRSF1
U2AF1L4ENSG00000161265.10102.85140153.34790-0.576201.892701.36160HepG2SRSF5
U2AF1L4ENSG00000161265.10128.1379070.052500.871103.543202.92230HepG2TAF15
U2AF1L4ENSG00000161265.10105.0079064.363300.706102.194901.44800HepG2TIA1
U2AF1L4ENSG00000161265.10174.3065098.462900.823904.075003.49320HepG2TIAL1
U2AF1L4ENSG00000161265.10188.47760118.056100.674802.098401.45890HepG2XRN2
U2AF1L4ENSG00000161265.10584.64200391.614500.578005.862005.08440K562AGGF1
U2AF1L4ENSG00000161265.10577.58510430.328300.424502.881101.87330K562AKAP8
U2AF1L4ENSG00000161265.10627.23570407.493400.622105.470104.53510K562AKAP8L
U2AF1L4ENSG00000161265.10241.30890344.85600-0.515103.382702.67250K562DDX47
U2AF1L4ENSG00000161265.1044.28580111.52720-1.332505.063304.04090K562G3BP2
U2AF1L4ENSG00000161265.10365.44200244.628500.578903.249402.38930K562HSPD1
U2AF1L4ENSG00000161265.10289.64690194.224700.576503.065601.43400K562LSM11
U2AF1L4ENSG00000161265.10562.25520413.962900.441602.484401.48320K562MAK16
U2AF1L4ENSG00000161265.10638.06790484.453200.397302.565901.69640K562MBNL1
U2AF1L4ENSG00000161265.10534.56200339.566900.654603.844602.75900K562NAA15
U2AF1L4ENSG00000161265.10331.05420214.460800.626303.389701.74930K562NUSAP1
U2AF1L4ENSG00000161265.10389.93290232.702500.744602.573001.62720K562PABPN1
U2AF1L4ENSG00000161265.10326.79430212.654900.619804.030402.25530K562PHF6
U2AF1L4ENSG00000161265.10125.89960195.45020-0.634502.824102.01340K562POLR2G
U2AF1L4ENSG00000161265.10488.05550276.597500.819202.956601.43990K562PPP1R8
U2AF1L4ENSG00000161265.10402.92280195.293201.044809.754507.83010K562PSIP1
U2AF1L4ENSG00000161265.10225.90020357.90290-0.663903.768002.81990K562PUF60
U2AF1L4ENSG00000161265.101018.96470404.116201.3342010.585309.56980K562PUS1
U2AF1L4ENSG00000161265.10644.64580393.754900.711108.144207.15590K562RBM15
U2AF1L4ENSG00000161265.10103.24940157.51750-0.609402.322401.33990K562NELFE
U2AF1L4ENSG00000161265.10474.68450212.777201.157504.816903.08290K562SF1
U2AF1L4ENSG00000161265.10575.19160244.416301.234606.399804.27010K562SNRNP200
U2AF1L4ENSG00000161265.10286.89070168.911400.764104.498403.10310K562SRFBP1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for U2AF1L4 is not available on ENCORE database.





16 RBPs can affect the splicing of U2AF1L4 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEU2AF1L4ENSG00000161265.10chr19-362355263623563936234970362353223623602536236088-0.522000.001660.02164excludedHepG2U2AF2
SEU2AF1L4ENSG00000161265.10chr19-362355263623563936234970362353223623602536236088-0.444000.002810.04591excludedK562U2AF2
SEU2AF1L4ENSG00000161265.10chr19-3623405536234246362334313623370436234709362348050.377000.002890.08664includedHepG2HNRNPC
SEU2AF1L4ENSG00000161265.10chr19-3623405536234246362334313623370436234709362348050.599000.000000.00000includedK562HNRNPC
A3SSU2AF1L4ENSG00000161265.10chr19-3623343136233704362334313623352036234709362348050.303000.000750.05611longerHepG2SF3A3
A3SSU2AF1L4ENSG00000161265.10chr19-362352233623563936235223362353223623602536236088-0.444000.001260.04611shorterK562U2AF2
A3SSU2AF1L4ENSG00000161265.10chr19-362352233623563936235223362353223623602536236088-0.562000.000000.00022shorterHepG2U2AF2
A3SSU2AF1L4ENSG00000161265.10chr19-3623497036235123362349703623504636235223362353220.197000.010350.05447longerK562AQR
A3SSU2AF1L4ENSG00000161265.10chr19-362352233623563936235223362353223623602536236088-0.284000.002950.01813shorterK562AQR
A3SSU2AF1L4ENSG00000161265.10chr19-362352233623563936235223362353223623602536236088-0.394000.001780.07118shorterK562U2AF1
A3SSU2AF1L4ENSG00000161265.10chr19-3623497036235123362349703623504636235223362353220.133000.000980.09450longerK562RBM15
A3SSU2AF1L4ENSG00000161265.10chr19-362352233623563936235223362353223623602536236088-0.400000.000000.00088shorterK562HNRNPC
RIU2AF1L4ENSG00000161265.10chr19-3623497036235322362349703623504636235223362353220.274000.004820.06080includedK562SF3B4
RIU2AF1L4ENSG00000161265.10chr19-3623522336236088362352233623563936236025362360880.250000.000440.03363includedK562PPIL4
RIU2AF1L4ENSG00000161265.10chr19-3623522336236088362352233623563936236025362360880.197000.000220.00192includedK562PUS1
RIU2AF1L4ENSG00000161265.10chr19-3623342936234805362334293623370436234709362348050.291000.000390.00323includedK562PUS1
RIU2AF1L4ENSG00000161265.10chr19-3623497036235322362349703623504636235223362353220.274000.000000.00000includedK562PUS1
RIU2AF1L4ENSG00000161265.10chr19-3623522336235639362352233623532236235526362356390.273000.000000.00005includedK562PUS1
RIU2AF1L4ENSG00000161265.10chr19-3623497036235322362349703623504636235223362353220.269000.000640.00930includedHepG2SF3A3
RIU2AF1L4ENSG00000161265.10chr19-362352233623563936235223362353223623552636235639-0.451000.000000.00000excludedK562HNRNPC
RIU2AF1L4ENSG00000161265.10chr19-3623497036235322362349703623504636235223362353220.407000.003430.02516includedHepG2U2AF2
RIU2AF1L4ENSG00000161265.10chr19-362352233623608836235223362353223623602536236088-0.544000.000020.00031excludedHepG2U2AF2
RIU2AF1L4ENSG00000161265.10chr19-362352233623608836235223362356393623602536236088-0.453000.000110.02162excludedK562PCBP1
RIU2AF1L4ENSG00000161265.10chr19-3623497036235322362349703623504636235223362353220.146000.001680.02108includedK562AGGF1
RIU2AF1L4ENSG00000161265.10chr19-3623522336236088362352233623563936236025362360880.179000.001530.01624includedK562AKAP8L
RIU2AF1L4ENSG00000161265.10chr19-3623342936234805362334293623370436234709362348050.195000.011230.08477includedK562AKAP8L
RIU2AF1L4ENSG00000161265.10chr19-3623497036235322362349703623504636235223362353220.218000.000090.00145includedK562AKAP8L
RIU2AF1L4ENSG00000161265.10chr19-3623522336235639362352233623532236235526362356390.174000.005790.04958includedK562AKAP8L
RIU2AF1L4ENSG00000161265.10chr19-3623342936234805362334293623370436234709362348050.342000.000760.00927includedHepG2U2AF1
RIU2AF1L4ENSG00000161265.10chr19-3623497036235322362349703623504636235223362353220.380000.004990.04612includedHepG2U2AF1
RIU2AF1L4ENSG00000161265.10chr19-3623522336236088362352233623563936236025362360880.193000.000350.00515includedK562RBM15
RIU2AF1L4ENSG00000161265.10chr19-3623497036235322362349703623504636235223362353220.232000.000000.00008includedK562RBM15
RIU2AF1L4ENSG00000161265.10chr19-3623522336235639362352233623532236235526362356390.178000.003510.03602includedK562RBM15
RIU2AF1L4ENSG00000161265.10chr19-3623497036235322362349703623504636235223362353220.357000.001660.03224includedK562U2AF1
RIU2AF1L4ENSG00000161265.10chr19-362352233623608836235223362353223623602536236088-0.416000.001650.03224excludedK562U2AF1
RIU2AF1L4ENSG00000161265.10chr19-362352233623563936235223362353223623552636235639-0.264000.000710.05917excludedK562XRCC6
RIU2AF1L4ENSG00000161265.10chr19-3623497036235322362349703623504636235223362353220.487000.000110.00241includedK562U2AF2
RIU2AF1L4ENSG00000161265.10chr19-362352233623608836235223362353223623602536236088-0.457000.001030.01611excludedK562U2AF2
RIU2AF1L4ENSG00000161265.10chr19-3623522336235639362352233623532236235526362356390.425000.002950.04629includedHepG2FUBP3
RIU2AF1L4ENSG00000161265.10chr19-3623342936234805362334293623370436234709362348050.484000.007420.08705includedHepG2SRSF9
RIU2AF1L4ENSG00000161265.10chr19-3623342936234805362334293623370436234709362348050.259000.008470.04640includedK562AQR
RIU2AF1L4ENSG00000161265.10chr19-3623497036235322362349703623504636235223362353220.196000.020070.09891includedK562AQR
RIU2AF1L4ENSG00000161265.10chr19-362352233623563936235223362353223623552636235639-0.174000.012700.06641excludedK562AQR
RIU2AF1L4ENSG00000161265.10chr19-362352233623608836235223362356393623602536236088-0.326000.006660.08298excludedK562FXR1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for U2AF1L4 is not avaliable on ENCORE database.