TRIP11

General Information

Gene Name       : TRIP11
Gene ID             : ENSG00000100815.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TRIP11)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TRIP11ENSG00000100815.1211.8910.0810.98ENCSR000AEF
HepG2TRIP11ENSG00000100815.124.647.195.92ENCSR985KAT
K562TRIP11ENSG00000100815.123.686.505.09ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TRIP11 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TRIP11 RNA is bound by 10 proteins.  







eCLIP assay for TRIP11 is not avaliable on ENCORE database.





10 proteins are bound to TRIP11 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr149244245892442534-3'-UTR,CDS,intron-Distal,intron-Proximal5.348818.07539HepG2BCLAF1
chr149250618192506338-5'-UTR,intron-Distal3.5754710.66738HepG2GRWD1
chr149250602292506065-5'-UTR,CDS,intron-Distal3.127113.37074K562TIA1
chr149250620492506368-5'-UTR,intron-Distal,intron-Proximal3.713999.57546K562ZNF622
chr149250632292506403-5'-UTR,intron-Distal,intron-Proximal3.127193.03570HepG2NCBP2
chr149250598392506071-5'-UTR,CDS,intron-Distal4.411015.17013K562RBM15
chr149247242192472496-CDS,intron-Distal3.526883.71797HepG2BCLAF1
chr149247166992471726-CDS,intron-Distal4.496787.97334HepG2BCLAF1
chr149247404892474145-CDS,intron-Distal5.8262613.02740HepG2BCLAF1
chr149248203992482109-CDS,intron-Distal,intron-Proximal4.241284.23295HepG2GRWD1
chr149248056292480667-CDS,intron-Distal3.500945.71803K562UCHL5
chr149248790492487924-CDS,intron-Distal4.359824.34038HepG2BCLAF1
chr149247398492474048-CDS,intron-Distal4.264126.22576HepG2BCLAF1
chr149248089292480923-CDS,intron-Distal,intron-Proximal5.134607.05570HepG2BCLAF1
chr149248056492480678-CDS,intron-Distal3.6504313.63205HepG2BCLAF1
chr149247034592470390-CDS,intron-Distal4.171253.55983HepG2HLTF
chr149247165592471729-CDS,intron-Distal3.847075.85226K562UCHL5
chr149248214992482197-CDS,intron-Distal,intron-Proximal4.533784.04372HepG2BCLAF1
chr149246565492465712-CDS,intron-Distal3.073096.09950HepG2BCLAF1
chr149248203992482088-CDS,intron-Distal,intron-Proximal5.5541010.12910HepG2BCLAF1
chr149247737992477415-CDS,intron-Distal3.080343.55800HepG2BCLAF1
chr149247048492470543-CDS,intron-Distal3.9913411.64153HepG2BCLAF1
chr149247167092471732-CDS,intron-Distal4.932126.71125HepG2FXR2
chr149248056092480665-CDS,intron-Distal3.387075.04943K562ZNF622
chr149247049592470564-CDS,intron-Distal4.693015.29868K562UCHL5
chr149247050892470607-CDS,intron-Distal3.475154.51666K562RBM15
chr149243781792437932-intron-Distal4.5245812.97146HepG2PTBP1
chr149243782292437915-intron-Distal5.554056.90462K562PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TRIP11 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TRIP11 is not available on ENCORE database.

  • 64 RBPs can affect the levels of TRIP11.  








The Knockdown/knockout RNA-Seq assay for TRIP11 is not available on ENCORE database.





64 RBPs can affect the gene expression of TRIP11 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TRIP11ENSG00000100815.81098.561101495.07770-0.444604.239003.51620HepG2BOP1
TRIP11ENSG00000100815.81610.028101144.750900.492006.400205.28950HepG2CALR
TRIP11ENSG00000100815.81699.453101372.548400.308102.244701.61680HepG2CPSF6
TRIP11ENSG00000100815.81195.19120864.379200.467403.935302.83360HepG2DDX24
TRIP11ENSG00000100815.8964.013201258.39220-0.384501.959001.43130HepG2DDX6
TRIP11ENSG00000100815.8623.64960882.02750-0.500103.731702.92250HepG2DNAJC21
TRIP11ENSG00000100815.82036.465601720.734600.242902.575801.99190HepG2ETF1
TRIP11ENSG00000100815.8642.931001130.89950-0.8147010.981109.34610HepG2EWSR1
TRIP11ENSG00000100815.8933.526401251.56580-0.423002.121101.53590HepG2G3BP1
TRIP11ENSG00000100815.8523.49240722.73700-0.465303.155102.19100HepG2GEMIN5
TRIP11ENSG00000100815.8595.45820890.47820-0.580605.605904.72990HepG2HNRNPA1
TRIP11ENSG00000100815.8667.89160990.51170-0.568605.469904.52160HepG2HNRNPC
TRIP11ENSG00000100815.8975.230501183.36540-0.279102.493701.81160HepG2HNRNPF
TRIP11ENSG00000100815.8809.40760983.96160-0.281702.682602.08550HepG2HNRNPU
TRIP11ENSG00000100815.8503.17970849.54460-0.755604.616803.27820HepG2METAP2
TRIP11ENSG00000100815.8824.608601122.41150-0.444802.258301.52440HepG2MSI2
TRIP11ENSG00000100815.81040.531401389.03780-0.416801.894001.36450HepG2NCBP2
TRIP11ENSG00000100815.8364.57450606.82570-0.735104.387102.39300HepG2PA2G4
TRIP11ENSG00000100815.8895.042001231.59160-0.460503.909003.21360HepG2PUF60
TRIP11ENSG00000100815.8584.46340789.84670-0.434503.549002.86150HepG2RPS19
TRIP11ENSG00000100815.81488.511201180.909700.333904.952904.05660HepG2SLBP
TRIP11ENSG00000100815.8790.115501021.83630-0.371004.786503.97800HepG2SMN1
TRIP11ENSG00000100815.8979.151401293.01730-0.401105.263404.66420HepG2SRSF1
TRIP11ENSG00000100815.81664.591801410.296300.239102.593802.09170HepG2SSB
TRIP11ENSG00000100815.8981.294901447.30590-0.560605.962504.95530HepG2TARDBP
TRIP11ENSG00000100815.81136.263601503.81290-0.404306.361605.37440HepG2UPF1
TRIP11ENSG00000100815.81090.194601545.72110-0.503705.496004.06490HepG2UTP18
TRIP11ENSG00000100815.81097.779001451.87470-0.403306.075505.24680HepG2UTP3
TRIP11ENSG00000100815.81130.09730966.833400.225002.137101.53570HepG2ZC3H8
TRIP11ENSG00000100815.8866.849301653.90850-0.9320033.6643032.30190HepG2ZNF622
TRIP11ENSG00000100815.8365.26070961.50840-1.3964035.2244033.27140K562AGGF1
TRIP11ENSG00000100815.8777.403701056.51260-0.442603.933702.71880K562AKAP8
TRIP11ENSG00000100815.8512.802901000.48330-0.9642014.2787012.61310K562AKAP8L
TRIP11ENSG00000100815.81426.64390908.839900.650407.460606.57320K562AQR
TRIP11ENSG00000100815.8744.000101049.72930-0.496606.054204.63700K562ATP5C1
TRIP11ENSG00000100815.8853.596701149.08710-0.428904.486402.94670K562CCDC124
TRIP11ENSG00000100815.8415.00650536.30370-0.369902.338201.38340K562DDX3X
TRIP11ENSG00000100815.8708.049501076.65300-0.604608.945507.19720K562DKC1
TRIP11ENSG00000100815.8393.04220578.28080-0.557105.208404.13230K562EIF3G
TRIP11ENSG00000100815.81109.12530560.306600.9850015.7651013.68960K562EIF4A3
TRIP11ENSG00000100815.8349.14740489.09160-0.486303.558002.06540K562EWSR1
TRIP11ENSG00000100815.8500.57060831.79290-0.732707.985906.46840K562FIP1L1
TRIP11ENSG00000100815.8797.75000608.603500.390302.392001.54700K562FTO
TRIP11ENSG00000100815.8526.64280753.12620-0.516104.585602.70460K562G3BP1
TRIP11ENSG00000100815.8831.75700589.540400.496502.999602.25860K562G3BP2
TRIP11ENSG00000100815.8769.557401008.04420-0.389503.123802.32250K562GRSF1
TRIP11ENSG00000100815.8505.23640653.40890-0.371002.671001.61770K562HNRNPA1
TRIP11ENSG00000100815.8603.31400923.26080-0.613802.463201.33240K562HNRNPA2B1
TRIP11ENSG00000100815.8838.953601056.20600-0.332202.568601.55270K562HNRNPL
TRIP11ENSG00000100815.8404.66530684.16950-0.757606.317604.82680K562HNRNPM
TRIP11ENSG00000100815.8684.821901127.72340-0.719608.440007.06540K562HSPD1
TRIP11ENSG00000100815.8506.23990787.52350-0.637504.765603.26140K562IGF2BP2
TRIP11ENSG00000100815.8629.427601061.79710-0.754409.626007.83240K562KIF1C
TRIP11ENSG00000100815.8617.303901016.37330-0.719407.606305.48110K562MAK16
TRIP11ENSG00000100815.8814.265601189.47620-0.546805.815304.40870K562MBNL1
TRIP11ENSG00000100815.8553.09460833.73360-0.592103.800302.72280K562NAA15
TRIP11ENSG00000100815.8471.66820807.82240-0.776303.530002.37220K562PABPN1
TRIP11ENSG00000100815.8638.26650488.277600.386402.828302.01710K562POLR2G
TRIP11ENSG00000100815.8582.31890944.26100-0.697407.735106.21410K562PPIG
TRIP11ENSG00000100815.8575.38010960.63760-0.739502.954801.43990K562PPP1R8
TRIP11ENSG00000100815.8518.05910804.33470-0.634707.326106.28280K562PTBP1
TRIP11ENSG00000100815.8467.29220992.27500-1.0864015.8724014.61280K562PUS1
TRIP11ENSG00000100815.8461.37520966.76440-1.0672020.3915018.73260K562RBM15
TRIP11ENSG00000100815.8440.48630738.90700-0.746302.757101.55650K562SF1
TRIP11ENSG00000100815.8278.39400392.93700-0.497202.687901.68280K562SRFBP1
TRIP11ENSG00000100815.8619.98540788.48920-0.346902.396501.73020K562SRSF1
TRIP11ENSG00000100815.8577.92860744.60220-0.365602.452501.47080K562SRSF5
TRIP11ENSG00000100815.8584.64170755.26980-0.369402.346001.35740K562TRA2A
TRIP11ENSG00000100815.81053.65540897.263000.231702.016101.39680K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TRIP11 is not available on ENCORE database.





2 RBPs can affect the splicing of TRIP11 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETRIP11ENSG00000100815.8chr14-924424519244253392441515924416309245462792454727-0.090000.000000.00007excludedHepG2U2AF2
SETRIP11ENSG00000100815.8chr14-924773299247741692473983924741969248055892480921-0.113000.004820.05166excludedHepG2U2AF2
SETRIP11ENSG00000100815.8chr14-924773299247741692473983924741969248055892480921-0.474000.008280.06986excludedK562AQR
SETRIP11ENSG00000100815.8chr14-924780989247813992473983924741969248055892480921-0.665000.000820.01691excludedK562U2AF2
SETRIP11ENSG00000100815.8chr14-924424519244253392441515924416309245462792454727-0.258000.006900.09260excludedK562U2AF2
A3SSTRIP11ENSG00000100815.8chr14-9244245192442590924424519244253392454627924547270.128000.008380.04542longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TRIP11 is not avaliable on ENCORE database.