TARS2

General Information

Gene Name : TARS2
Gene ID : ENSG00000143374.16
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TARS2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TARS2	ENSG00000143374.16	23.19	31.45	27.32	ENCSR000AEF
HepG2	TARS2	ENSG00000143374.16	22.98	20.32	21.65	ENCSR985KAT
K562	TARS2	ENSG00000143374.16	45.12	43.21	44.16	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TARS2 is not avaliable on ENCORE database.

Proteins bound to RNA

TARS2 RNA is bound by 5 proteins.

CanvasJS.com

eCLIP assay for TARS2 is not avaliable on ENCORE database.

5 proteins are bound to TARS2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	150480004	150480046	+	3'-UTR	6.21497	20.10050	K562	LIN28B
chr1	150460529	150460576	+	CDS,intron-Proximal	6.50107	18.62356	K562	AQR
chr1	150479987	150480004	+	3'-UTR	6.07118	17.63566	K562	LIN28B
chr1	150463962	150463998	+	CDS,intron-Distal,intron-Proximal	4.71521	16.50149	HepG2	PRPF8
chr1	150463998	150464025	+	intron-Distal,intron-Proximal	4.90680	14.13178	HepG2	PRPF8
chr1	150461397	150461449	+	CDS,intron-Proximal	4.29306	13.09382	K562	AQR
chr1	150479514	150479595	+	3'-UTR,CDS	4.23043	9.91453	K562	PUM2
chr1	150477459	150477536	+	intron-Proximal	5.54007	9.41643	K562	AQR
chr1	150461396	150461479	+	CDS,intron-Proximal	3.68053	7.44037	K562	BUD13
chr1	150476910	150476968	+	3'-UTR,CDS,intron-Proximal	4.41944	5.97994	K562	AQR
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 16 entries

eCLIP assay for TARS2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TARS2 is not available on ENCORE database.
82 RBPs can affect the levels of TARS2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for TARS2 is not available on ENCORE database.

82 RBPs can affect the gene expression of TARS2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TARS2	ENSG00000143374.10	821.36810	1780.45280	-1.11610	21.12980	19.68280	K562	AQR
TARS2	ENSG00000143374.10	332.77360	752.65770	-1.17750	20.60840	18.38130	K562	U2AF2
TARS2	ENSG00000143374.10	502.10470	855.01540	-0.76800	13.22480	12.26930	HepG2	SSB
TARS2	ENSG00000143374.10	652.46420	1043.21210	-0.67710	11.64280	10.54880	HepG2	ETF1
TARS2	ENSG00000143374.10	262.19030	657.17760	-1.32570	11.54350	9.96380	HepG2	SNRNP70
TARS2	ENSG00000143374.10	710.43100	1204.84900	-0.76210	10.79180	9.67690	K562	HNRNPC
TARS2	ENSG00000143374.10	490.78600	801.88010	-0.70830	10.62760	9.39740	HepG2	SLBP
TARS2	ENSG00000143374.10	828.33840	364.69920	1.18340	10.13740	8.70690	HepG2	CNOT7
TARS2	ENSG00000143374.10	277.89520	578.67050	-1.05820	9.72160	8.58170	HepG2	SUPV3L1
TARS2	ENSG00000143374.10	672.13470	984.79600	-0.55110	8.20320	7.46640	HepG2	SRFBP1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 91 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TARS2 is not available on ENCORE database.

25 RBPs can affect the splicing of TARS2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	TARS2	ENSG00000143374.10	chr1	+	150477107	150477209			150476810	150476911	150477381	150477454	-0.42000	0.00000	0.00000	excluded	K562	PCBP1
SE	TARS2	ENSG00000143374.10	chr1	+	150477107	150477209			150476810	150476911	150477381	150477454	-0.28600	0.00000	0.00204	excluded	K562	SBDS
SE	TARS2	ENSG00000143374.10	chr1	+	150477107	150477209			150476810	150476911	150477381	150477454	-0.24300	0.00000	0.00309	excluded	K562	NPM1
SE	TARS2	ENSG00000143374.10	chr1	+	150477107	150477209			150476810	150476911	150477381	150477454	-0.45500	0.00000	0.00001	excluded	K562	HNRNPC
SE	TARS2	ENSG00000143374.10	chr1	+	150477107	150477209			150476810	150476911	150477381	150477454	-0.49100	0.00001	0.00104	excluded	HepG2	PCBP1
SE	TARS2	ENSG00000143374.10	chr1	+	150477107	150477209			150476810	150476911	150477381	150477454	-0.22100	0.00002	0.00341	excluded	K562	HNRNPUL1
MXE	TARS2	ENSG00000143374.10	chr1	+	150469285	150469384	150470005	150470223	150464886	150464965	150470977	150471140	-0.11000	0.00002	0.00226	2included	K562	SBDS
SE	TARS2	ENSG00000143374.10	chr1	+	150477107	150477209			150476810	150476911	150477381	150477454	-0.45400	0.00004	0.00885	excluded	HepG2	TAF15
SE	TARS2	ENSG00000143374.10	chr1	+	150468957	150469104			150464660	150464965	150469285	150469384	0.10900	0.00006	0.01944	included	K562	SBDS
MXE	TARS2	ENSG00000143374.10	chr1	+	150468957	150469104	150469285	150469384	150464886	150464965	150470005	150470223	-0.38900	0.00011	0.00641	2included	HepG2	SUPV3L1

Showing 1 to 10 of 37 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TARS2

General Information

Functions

Localization

Domains (AlphaFold: TARS2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TARS2 is not avaliable on ENCORE database.

5 proteins are bound to TARS2 RNA:

eCLIP assay for TARS2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TARS2 is not available on ENCORE database.

82 RBPs can affect the gene expression of TARS2 :

The Knockdown/knockout RNA-Seq assay for TARS2 is not available on ENCORE database.

25 RBPs can affect the splicing of TARS2 :

The Knockdown/knockout RNA-Seq assay for TARS2 is not avaliable on ENCORE database.