TACC2

General Information

Gene Name : TACC2
Gene ID : ENSG00000138162.18
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TACC2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TACC2	ENSG00000138162.18	0.00	0.05	0.03	ENCSR000AEF
HepG2	TACC2	ENSG00000138162.18	19.09	18.98	19.04	ENCSR985KAT
K562	TACC2	ENSG00000138162.18	0.06	0.02	0.04	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TACC2 is not avaliable on ENCORE database.

Proteins bound to RNA

TACC2 RNA is bound by 17 proteins.

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eCLIP assay for TACC2 is not avaliable on ENCORE database.

17 proteins are bound to TACC2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr10	123997552	123997592	+	intron-Proximal	4.81271	11.91804	HepG2	PRPF8
chr10	124008563	124008669	+	CDS,intron-Proximal	3.18691	9.88362	HepG2	PPIG
chr10	123872546	123872651	+	5'-UTR,intron-Distal	4.48961	9.53026	HepG2	DDX3X
chr10	123976322	123976396	+	5'-UTR,CDS,intron-Proximal	4.58836	9.10443	HepG2	PRPF8
chr10	123984282	123984381	+	3'-UTR,CDS,intron-Proximal	4.43374	8.47952	HepG2	PRPF8
chr10	123985912	123986001	+	3'-UTR,CDS,intron-Proximal	4.75657	7.25648	HepG2	GRWD1
chr10	123987353	123987443	+	3'-UTR,CDS	3.67368	7.10944	HepG2	PPIG
chr10	123976135	123976245	+	5'-UTR,CDS,intron-Proximal	3.97566	7.03378	HepG2	GRWD1
chr10	123872405	123872511	+	intron-Distal	3.78697	6.95142	HepG2	DDX3X
chr10	123963933	123963989	+	intron-Distal	5.40427	6.79597	HepG2	XPO5
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 52 entries

eCLIP assay for TACC2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TACC2 is not available on ENCORE database.
70 RBPs can affect the levels of TACC2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for TACC2 is not available on ENCORE database.

70 RBPs can affect the gene expression of TACC2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TACC2	ENSG00000138162.13	2808.43450	1628.61880	0.78600	34.26000	32.88840	HepG2	ZNF622
TACC2	ENSG00000138162.13	2005.81380	1097.11320	0.87040	26.10280	24.11930	HepG2	AKAP8L
TACC2	ENSG00000138162.13	1930.37840	1073.52120	0.84640	24.44730	23.12870	HepG2	PTBP1
TACC2	ENSG00000138162.13	1895.07980	1112.24010	0.76870	22.81540	21.36360	HepG2	PUS1
TACC2	ENSG00000138162.13	1811.68900	1054.95090	0.78010	21.23230	19.80760	HepG2	PCBP1
TACC2	ENSG00000138162.13	1533.95450	777.79270	0.97970	15.47180	13.37060	HepG2	SERBP1
TACC2	ENSG00000138162.13	1631.66010	1091.74920	0.57960	13.72540	12.47710	HepG2	CKAP4
TACC2	ENSG00000138162.13	2481.01300	1413.64920	0.81140	13.60560	12.17590	HepG2	U2AF1
TACC2	ENSG00000138162.13	2325.70090	1300.35110	0.83870	11.14160	10.05390	HepG2	PUF60
TACC2	ENSG00000138162.13	1173.85690	1674.50120	-0.51250	10.03100	9.17150	HepG2	SSB
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 70 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TACC2 is not available on ENCORE database.

4 RBPs can affect the splicing of TACC2 :

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Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	TACC2	ENSG00000138162.13	chr10	+	123903086	123903221			123892123	123892249	123954554	123954691	-0.26600	0.00000	0.00002	excluded	HepG2	U2AF1
SE	TACC2	ENSG00000138162.13	chr10	+	123903086	123903221			123892123	123892249	123954554	123954691	-0.16500	0.00000	0.00000	excluded	HepG2	U2AF2
SE	TACC2	ENSG00000138162.13	chr10	+	123903086	123903221			123892123	123892249	123954554	123954691	0.34600	0.00000	0.00000	included	HepG2	SFPQ
MXE	TACC2	ENSG00000138162.13	chr10	+	123892123	123892249	123903086	123903221	123847992	123848106	123954554	123954691	-0.34000	0.00000	0.00000	2included	HepG2	SFPQ
SE	TACC2	ENSG00000138162.13	chr10	+	123988860	123989001			123987351	123987523	123996909	123997053	0.22900	0.00002	0.00053	included	HepG2	U2AF2
A3SS	TACC2	ENSG00000138162.13	chr10	+	123974905	123974966			123974917	123974966	123971126	123971223	0.06400	0.00024	0.01208	longer	HepG2	U2AF1
SE	TACC2	ENSG00000138162.13	chr10	+	123972856	123972892			123969911	123971223	123974905	123974966	-0.08100	0.00028	0.05016	excluded	HepG2	RBM15
SE	TACC2	ENSG00000138162.13	chr10	+	123972856	123972892			123969911	123971223	123974905	123974966	-0.11700	0.00041	0.02377	excluded	HepG2	SFPQ
SE	TACC2	ENSG00000138162.13	chr10	+	123974917	123974966			123969911	123971223	123976141	123976343	-0.35400	0.00706	0.09886	excluded	HepG2	U2AF1
SE	TACC2	ENSG00000138162.13	chr10	+	123892123	123892249			123847992	123848106	123954554	123954691	0.12100	0.00918	0.08536	included	HepG2	U2AF2

Showing 1 to 10 of 10 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TACC2

General Information

Functions

Localization

Domains (AlphaFold: TACC2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TACC2 is not avaliable on ENCORE database.

17 proteins are bound to TACC2 RNA:

eCLIP assay for TACC2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TACC2 is not available on ENCORE database.

70 RBPs can affect the gene expression of TACC2 :

The Knockdown/knockout RNA-Seq assay for TACC2 is not available on ENCORE database.

4 RBPs can affect the splicing of TACC2 :

The Knockdown/knockout RNA-Seq assay for TACC2 is not avaliable on ENCORE database.