SAR1A

General Information

Gene Name : SAR1A
Gene ID : ENSG00000079332.14
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: SAR1A)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	SAR1A	ENSG00000079332.14	35.12	37.30	36.21	ENCSR000AEF
HepG2	SAR1A	ENSG00000079332.14	58.39	58.66	58.52	ENCSR985KAT
K562	SAR1A	ENSG00000079332.14	53.30	51.54	52.42	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for SAR1A is not avaliable on ENCORE database.

Proteins bound to RNA

SAR1A RNA is bound by 41 proteins.

CanvasJS.com

eCLIP assay for SAR1A is not avaliable on ENCORE database.

41 proteins are bound to SAR1A RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr10	71910251	71910318	-	3'-UTR,intron-Distal	4.13518	65.97794	K562	UPF1
chr10	71922095	71922158	-	intron-Distal	7.83979	59.76850	HepG2	PCBP2
chr10	71930171	71930197	-	5'-UTR,intron-Distal	5.42514	55.13898	K562	DDX3X
chr10	71910981	71911017	-	3'-UTR,intron-Distal	3.30237	39.96981	K562	UPF1
chr10	71922055	71922163	-	intron-Distal	5.32910	38.62718	HepG2	PTBP1
chr10	71930167	71930171	-	5'-UTR,intron-Distal	5.11856	33.96166	K562	DDX3X
chr10	71911744	71911796	-	3'-UTR,intron-Distal	4.31007	32.85397	K562	UPF1
chr10	71922054	71922166	-	intron-Distal	5.59947	32.73654	K562	PTBP1
chr10	71922049	71922095	-	intron-Distal	6.00851	32.57192	HepG2	PCBP2
chr10	71930197	71930254	-	5'-UTR,intron-Distal,intron-Proximal	4.88530	30.50568	K562	DDX3X
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 123 entries

eCLIP assay for SAR1A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for SAR1A is not available on ENCORE database.
90 RBPs can affect the levels of SAR1A.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for SAR1A is not available on ENCORE database.

90 RBPs can affect the gene expression of SAR1A :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SAR1A	ENSG00000079332.10	1049.06930	2637.42650	-1.33000	53.87580	52.15880	HepG2	RBM22
SAR1A	ENSG00000079332.10	7095.70550	3107.75170	1.19100	31.97370	30.10990	K562	PUS1
SAR1A	ENSG00000079332.10	5367.76620	3028.30240	0.82570	27.21960	25.27210	K562	RBM15
SAR1A	ENSG00000079332.10	1420.75760	2351.00850	-0.72660	26.03790	24.20150	HepG2	HNRNPL
SAR1A	ENSG00000079332.10	828.02060	1653.80010	-0.99800	22.97450	21.13380	HepG2	DDX19B
SAR1A	ENSG00000079332.10	3620.52730	2449.83730	0.56340	21.26100	20.09410	HepG2	ZNF622
SAR1A	ENSG00000079332.10	1833.36590	2593.26720	-0.50030	14.74040	13.59840	HepG2	PUM1
SAR1A	ENSG00000079332.10	1365.71770	2395.46950	-0.81060	13.26530	11.86420	HepG2	TARDBP
SAR1A	ENSG00000079332.10	2096.20230	3020.23730	-0.52690	12.56950	11.57120	HepG2	NELFE
SAR1A	ENSG00000079332.10	5016.63310	3134.00540	0.67860	12.53630	11.00390	K562	AKAP8L
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 104 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for SAR1A is not available on ENCORE database.

16 RBPs can affect the splicing of SAR1A :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	SAR1A	ENSG00000079332.10	chr10	-	71921374	71921494			71920759	71920825	71930168	71930279	-0.10100	0.00000	excluded	K562	AKAP8L
SE	SAR1A	ENSG00000079332.10	chr10	-	71921374	71921494			71920759	71920825	71930168	71930279	-0.19000	0.00000	excluded	K562	PUS1
SE	SAR1A	ENSG00000079332.10	chr10	-	71922445	71922573			71921613	71921687	71930168	71930279	0.07000	0.00021	included	HepG2	NCBP2
SE	SAR1A	ENSG00000079332.10	chr10	-	71921374	71921494			71920759	71920825	71930168	71930279	-0.09100	0.00000	excluded	K562	UTP18
SE	SAR1A	ENSG00000079332.10	chr10	-	71921374	71921494			71920759	71920825	71930168	71930279	-0.09000	0.00000	excluded	K562	RBM15
SE	SAR1A	ENSG00000079332.10	chr10	-	71921374	71921494			71920759	71920825	71930168	71930279	-0.13100	0.00000	excluded	K562	AGGF1
SE	SAR1A	ENSG00000079332.10	chr10	-	71922445	71922515			71921613	71921687	71930168	71930279	0.11600	0.00000	included	HepG2	SRSF9
MXE	SAR1A	ENSG00000079332.10	chr10	-	71921355	71921494	71921613	71921687	71920759	71920825	71930168	71930279	-0.11100	0.00017	2included	K562	RBM15
MXE	SAR1A	ENSG00000079332.10	chr10	-	71921334	71921494	71921613	71921687	71920759	71920825	71930168	71930279	-0.11400	0.00004	2included	K562	RBM15
MXE	SAR1A	ENSG00000079332.10	chr10	-	71921374	71921494	71921613	71921687	71920759	71920825	71930168	71930279	-0.13800	0.00000	2included	K562	DDX55

Showing 1 to 10 of 22 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

SAR1A

General Information

Functions

Localization

Domains (AlphaFold: SAR1A)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for SAR1A is not avaliable on ENCORE database.

41 proteins are bound to SAR1A RNA:

eCLIP assay for SAR1A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for SAR1A is not available on ENCORE database.

90 RBPs can affect the gene expression of SAR1A :

The Knockdown/knockout RNA-Seq assay for SAR1A is not available on ENCORE database.

16 RBPs can affect the splicing of SAR1A :

The Knockdown/knockout RNA-Seq assay for SAR1A is not avaliable on ENCORE database.