RP11-462G2.1

General Information

Gene Name : RP11-462G2.1
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP11-462G2.1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-462G2.1 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-462G2.1 RNA is bound by 4 proteins.

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eCLIP assay for RP11-462G2.1 is not avaliable on ENCORE database.

4 proteins are bound to RP11-462G2.1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr6	71108917	71108923	+	intron-Proximal	3.15763	23.45427	K562	YBX3
chr6	71104746	71104789	+	intron-Proximal	5.85652	18.01578	K562	AQR
chr6	71108895	71108939	+	intron-Proximal	3.13516	10.60546	K562	AQR
chr6	71104989	71105009	+	intron-Proximal	4.34438	9.29543	K562	AQR
chr6	71108917	71108941	+	intron-Proximal	4.11630	6.58643	K562	PUM1
chr6	71108917	71108920	+	intron-Proximal	4.04281	3.74671	K562	IGF2BP2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 6 of 6 entries

eCLIP assay for RP11-462G2.1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RP11-462G2.1 is not available on ENCORE database.
66 RBPs can affect the levels of RP11-462G2.1.

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The Knockdown/knockout RNA-Seq assay for RP11-462G2.1 is not available on ENCORE database.

66 RBPs can affect the gene expression of RP11-462G2.1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP11-462G2.1	ENSG00000237643.1	570.07200	220.86580	1.36790	19.39640	16.95930	K562	FIP1L1
RP11-462G2.1	ENSG00000237643.1	517.00560	1129.56700	-1.12750	18.08320	15.43070	K562	NELFE
RP11-462G2.1	ENSG00000237643.1	289.51090	625.36500	-1.11110	16.12640	14.17660	K562	SYNCRIP
RP11-462G2.1	ENSG00000237643.1	455.48120	1043.34520	-1.19580	12.63100	11.43420	K562	FXR1
RP11-462G2.1	ENSG00000237643.1	622.07320	1073.39490	-0.78700	10.39450	8.60740	K562	RBM22
RP11-462G2.1	ENSG00000237643.1	336.82680	567.35730	-0.75230	9.18390	8.08040	K562	DDX47
RP11-462G2.1	ENSG00000237643.1	765.26060	475.39670	0.68670	9.58150	7.38800	K562	SRSF7
RP11-462G2.1	ENSG00000237643.1	335.59010	168.55120	0.99340	8.21560	6.85120	K562	CPSF6
RP11-462G2.1	ENSG00000237643.1	1550.93840	1054.86170	0.55600	9.05860	6.80640	K562	EIF2S1
RP11-462G2.1	ENSG00000237643.1	501.02570	785.43910	-0.64860	8.10890	6.75370	K562	EIF3G
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 66 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RP11-462G2.1 is not available on ENCORE database.

13 RBPs can affect the splicing of RP11-462G2.1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	RP11-462G2.1	ENSG00000237643.1	chr6	+	71104932	71104969	71104589	71104746	71108917	71109120	0.14100	0.00000	0.00000	included	K562	SRSF1
SE	RP11-462G2.1	ENSG00000237643.1	chr6	+	71104932	71104969	71104589	71104746	71108917	71109120	0.08500	0.00000	0.00022	included	K562	TARDBP
SE	RP11-462G2.1	ENSG00000237643.1	chr6	+	71104932	71104969	71104589	71104746	71108917	71109120	0.08900	0.00000	0.00028	included	K562	PTBP1
A3SS	RP11-462G2.1	ENSG00000237643.1	chr6	+	71104929	71104969	71104932	71104969	71104589	71104746	0.08100	0.00000	0.00000	longer	K562	AGGF1
A3SS	RP11-462G2.1	ENSG00000237643.1	chr6	+	71104929	71104969	71104932	71104969	71104589	71104746	0.07600	0.00000	0.00000	longer	K562	PUS1
SE	RP11-462G2.1	ENSG00000237643.1	chr6	+	71104932	71104969	71104589	71104746	71108917	71109120	-0.11400	0.00003	0.00327	excluded	K562	EFTUD2
A3SS	RP11-462G2.1	ENSG00000237643.1	chr6	+	71108894	71109120	71108917	71109120	71104589	71104746	0.05700	0.00003	0.00025	longer	K562	AQR
A3SS	RP11-462G2.1	ENSG00000237643.1	chr6	+	71104929	71104969	71104932	71104969	71104589	71104746	-0.05400	0.00005	0.03846	shorter	K562	SBDS
SE	RP11-462G2.1	ENSG00000237643.1	chr6	+	71104932	71104969	71104589	71104746	71108917	71109120	-0.12500	0.00016	0.03688	excluded	K562	NPM1
SE	RP11-462G2.1	ENSG00000237643.1	chr6	+	71104932	71104969	71104589	71104746	71108917	71109120	-0.12000	0.00024	0.01203	excluded	K562	PRPF8

Showing 1 to 10 of 14 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP11-462G2.1

General Information

Functions

Localization

Domains (AlphaFold: RP11-462G2.1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-462G2.1 is not avaliable on ENCORE database.

4 proteins are bound to RP11-462G2.1 RNA:

eCLIP assay for RP11-462G2.1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-462G2.1 is not available on ENCORE database.

66 RBPs can affect the gene expression of RP11-462G2.1 :

The Knockdown/knockout RNA-Seq assay for RP11-462G2.1 is not available on ENCORE database.

13 RBPs can affect the splicing of RP11-462G2.1 :

The Knockdown/knockout RNA-Seq assay for RP11-462G2.1 is not avaliable on ENCORE database.