RP11-206L10.11

General Information

Gene Name : RP11-206L10.11
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP11-206L10.11)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-206L10.11 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-206L10.11 RNA is bound by 8 proteins.

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eCLIP assay for RP11-206L10.11 is not avaliable on ENCORE database.

8 proteins are bound to RP11-206L10.11 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	773663	773797	+	intron-Distal	3.99016	8.71635	K562	SAFB2
chr1	774963	775025	+	intron-Distal	5.12422	7.48584	HepG2	HNRNPL
chr1	770397	770493	+	intron-Distal	5.37591	7.34252	HepG2	PCBP2
chr1	781898	781957	+	intron-Distal	4.05299	6.88258	HepG2	RBFOX2
chr1	770283	770397	+	intron-Distal	5.06367	6.57498	HepG2	PCBP2
chr1	765618	765670	+	intron-Distal	3.56841	5.06177	HepG2	SUGP2
chr1	778629	778723	+	intron-Distal	3.20964	4.84290	HepG2	HLTF
chr1	773797	773892	+	intron-Distal	4.10967	4.72697	K562	SAFB2
chr1	769453	769558	+	intron-Distal	3.92641	4.58695	K562	SLTM
chr1	769467	769567	+	intron-Distal	4.01745	3.65589	K562	SAFB2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 11 entries

eCLIP assay for RP11-206L10.11 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RP11-206L10.11 is not available on ENCORE database.
76 RBPs can affect the levels of RP11-206L10.11.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for RP11-206L10.11 is not available on ENCORE database.

76 RBPs can affect the gene expression of RP11-206L10.11 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP11-206L10.11	ENSG00000228794.4	762.77850	278.82270	1.45180	31.07670	29.18610	K562	FXR1
RP11-206L10.11	ENSG00000228794.4	172.58960	399.49960	-1.21080	13.84220	12.80460	HepG2	NELFE
RP11-206L10.11	ENSG00000228794.4	1060.42650	632.13200	0.74620	13.67900	12.34050	K562	DDX47
RP11-206L10.11	ENSG00000228794.4	508.92230	261.36350	0.96130	12.86930	11.99990	HepG2	SRFBP1
RP11-206L10.11	ENSG00000228794.4	137.95650	385.24490	-1.48160	13.26590	11.95820	HepG2	MATR3
RP11-206L10.11	ENSG00000228794.4	161.35000	434.16550	-1.42810	12.88780	11.82840	HepG2	AKAP1
RP11-206L10.11	ENSG00000228794.4	166.78090	372.07190	-1.15760	12.55200	11.38460	HepG2	RECQL
RP11-206L10.11	ENSG00000228794.4	571.60440	304.68000	0.90760	12.20240	11.08030	HepG2	UTP3
RP11-206L10.11	ENSG00000228794.4	903.10050	516.30400	0.80660	11.75900	10.07170	K562	SYNCRIP
RP11-206L10.11	ENSG00000228794.4	346.41440	170.10210	1.02600	11.18150	9.94550	HepG2	SRSF7
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 85 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RP11-206L10.11 is not available on ENCORE database.

15 RBPs can affect the splicing of RP11-206L10.11 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	RP11-206L10.11	ENSG00000228794.4	chr1	+	783033	783186			764382	764484	787306	787490	0.42700	0.00000	0.00021	included	K562	MATR3
SE	RP11-206L10.11	ENSG00000228794.4	chr1	+	783033	783186			764382	764484	787306	787490	-0.60500	0.00000	0.00000	excluded	K562	PUS1
SE	RP11-206L10.11	ENSG00000228794.4	chr1	+	783033	783186			764382	764484	787306	787490	-0.53900	0.00000	0.00000	excluded	K562	RBM15
SE	RP11-206L10.11	ENSG00000228794.4	chr1	+	783033	783186			764382	764484	787306	787490	-0.49800	0.00000	0.00000	excluded	K562	AGGF1
SE	RP11-206L10.11	ENSG00000228794.4	chr1	+	783033	783186			764382	764484	787306	787490	0.49500	0.00000	0.00000	included	K562	PTBP1
MXE	RP11-206L10.11	ENSG00000228794.4	chr1	+	783033	783186	787306	787490	764382	764484	788050	788146	0.45400	0.00000	0.00000	1included	K562	PTBP1
SE	RP11-206L10.11	ENSG00000228794.4	chr1	+	783033	783186			764382	764484	787306	787490	0.27700	0.00001	0.00731	included	K562	APOBEC3C
SE	RP11-206L10.11	ENSG00000228794.4	chr1	+	783033	783186			764382	764484	787306	787490	-0.44200	0.00004	0.00290	excluded	K562	UTP18
MXE	RP11-206L10.11	ENSG00000228794.4	chr1	+	783033	783186	787306	787490	764382	764484	788050	788146	0.32600	0.00005	0.00152	1included	K562	SRSF1
MXE	RP11-206L10.11	ENSG00000228794.4	chr1	+	783033	783186	787306	787490	764382	764484	788050	788146	0.38100	0.00006	0.00852	1included	K562	RBM22

Showing 1 to 10 of 19 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP11-206L10.11

General Information

Functions

Localization

Domains (AlphaFold: RP11-206L10.11)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-206L10.11 is not avaliable on ENCORE database.

8 proteins are bound to RP11-206L10.11 RNA:

eCLIP assay for RP11-206L10.11 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-206L10.11 is not available on ENCORE database.

76 RBPs can affect the gene expression of RP11-206L10.11 :

The Knockdown/knockout RNA-Seq assay for RP11-206L10.11 is not available on ENCORE database.

15 RBPs can affect the splicing of RP11-206L10.11 :

The Knockdown/knockout RNA-Seq assay for RP11-206L10.11 is not avaliable on ENCORE database.