RNF220

General Information

Gene Name : RNF220
Gene ID : ENSG00000187147.17
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RNF220)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	RNF220	ENSG00000187147.17	31.58	51.26	41.42	ENCSR000AEF
HepG2	RNF220	ENSG00000187147.17	97.75	61.94	79.84	ENCSR985KAT
K562	RNF220	ENSG00000187147.17	75.39	65.56	70.47	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RNF220 is not avaliable on ENCORE database.

Proteins bound to RNA

RNF220 RNA is bound by 37 proteins.

eCLIP assay for RNF220 is not avaliable on ENCORE database.

37 proteins are bound to RNF220 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	45117296	45117337	+	3'-UTR	4.13667	3.69433	K562	UPF1
chr1	45101781	45101882	+	3'-UTR,CDS,intron-Proximal	4.29686	8.47952	HepG2	PRPF8
chr1	45116910	45116963	+	3'-UTR	3.97148	40.19232	K562	PUM2
chr1	45101178	45101307	+	3'-UTR,CDS,intron-Proximal	5.39439	11.09437	K562	BUD13
chr1	45101657	45101744	+	3'-UTR,CDS,intron-Proximal	5.06316	6.40247	K562	SF3B4
chr1	45101728	45101812	+	3'-UTR,CDS	3.13064	7.47194	HepG2	GRWD1
chr1	45116581	45116637	+	3'-UTR	3.53257	10.50498	K562	PUM2
chr1	45117002	45117043	+	3'-UTR	4.48302	12.75399	K562	PUM2
chr1	45117043	45117096	+	3'-UTR	6.30470	85.85971	K562	PUM2
chr1	45101701	45101760	+	3'-UTR,CDS,intron-Proximal	5.12203	8.44976	K562	PUM2
chr1	45116840	45116900	+	3'-UTR	5.81558	69.14819	K562	PUM2
chr1	45116808	45116840	+	3'-UTR	5.59429	22.75149	K562	PUM2
chr1	45117113	45117167	+	3'-UTR	3.40998	4.05658	K562	DDX6
chr1	45101218	45101320	+	3'-UTR,CDS,intron-Proximal	4.19472	8.48059	HepG2	GRWD1
chr1	45116513	45116541	+	3'-UTR	4.53279	17.66105	K562	PUM2
chr1	45116541	45116581	+	3'-UTR	4.43378	48.76281	K562	PUM2
chr1	45116913	45117016	+	3'-UTR	3.74411	8.99360	HepG2	UPF1
chr1	45116544	45116626	+	3'-UTR	3.41055	8.05400	K562	DDX55
chr1	45101701	45101837	+	3'-UTR,CDS,intron-Proximal	3.27151	6.51943	K562	PUM1
chr1	45117282	45117337	+	3'-UTR	5.12308	10.86839	K562	PUM2
chr1	45101236	45101304	+	3'-UTR,CDS,intron-Proximal	3.82472	5.23469	HepG2	AQR
chr1	45116819	45116890	+	3'-UTR	3.05326	3.42475	K562	DDX55
chr1	45116589	45116641	+	3'-UTR	3.82897	11.18724	K562	HNRNPL
chr1	45116563	45116589	+	3'-UTR	3.66257	9.59881	K562	HNRNPL
chr1	45116911	45116978	+	3'-UTR	3.68977	6.07797	HepG2	LARP4
chr1	45101752	45101857	+	3'-UTR,CDS,intron-Proximal	4.17643	6.11943	K562	UCHL5
chr1	45116843	45116886	+	3'-UTR	3.95003	3.16434	HepG2	LARP4
chr1	45116914	45116972	+	3'-UTR	4.12907	5.84717	K562	PUM1
chr1	45116521	45116650	+	3'-UTR	3.79376	10.25769	K562	PUM1
chr1	45101226	45101291	+	3'-UTR,CDS,intron-Proximal	3.63955	3.12941	K562	UCHL5
chr1	45116995	45117038	+	3'-UTR	3.76363	7.04350	HepG2	PCBP2
chr1	45101243	45101265	+	3'-UTR,CDS,intron-Proximal	3.73135	6.24385	K562	PUM2
chr1	45101689	45101752	+	3'-UTR,CDS,intron-Proximal	4.34707	4.07072	K562	UCHL5
chr1	45116843	45116908	+	3'-UTR	3.80765	4.39142	HepG2	PCBP2
chr1	45117121	45117160	+	3'-UTR	3.85371	3.16434	HepG2	LARP4
chr1	45116700	45116779	+	3'-UTR	4.32803	4.49605	HepG2	UPF1
chr1	45116509	45116691	+	3'-UTR	3.32233	7.05973	HepG2	UPF1
chr1	44870884	44871024	+	5'-UTR	3.47946	6.40214	HepG2	NCBP2
chr1	45097389	45097536	+	5'-UTR,intron-Distal	4.35582	4.59965	HepG2	PRPF4
chr1	45097672	45097804	+	5'-UTR,intron-Distal	3.97255	6.98150	K562	DDX3X
chr1	45097664	45097798	+	5'-UTR,intron-Distal	4.09147	27.15368	HepG2	DDX3X
chr1	45110372	45110454	+	CDS	3.56613	4.20387	K562	ZNF622
chr1	45110311	45110393	+	CDS,intron-Proximal	4.57930	4.82767	HepG2	SF3B4
chr1	45101169	45101236	+	CDS,intron-Proximal	3.62475	3.67894	HepG2	AQR
chr1	45110869	45110925	+	CDS,intron-Proximal	4.03016	4.49024	K562	AQR
chr1	45110880	45110929	+	CDS,intron-Proximal	3.76099	3.39716	K562	U2AF2
chr1	45097966	45098062	+	CDS,intron-Proximal	3.93228	17.73703	K562	AQR
chr1	45110751	45110794	+	CDS,intron-Proximal	5.44089	10.32702	HepG2	AQR
chr1	45097968	45098048	+	CDS,intron-Proximal	4.93797	12.14514	HepG2	AQR
chr1	45110749	45110792	+	CDS,intron-Proximal	4.96454	5.17615	K562	AQR
chr1	45097979	45098073	+	CDS,intron-Proximal	3.01431	6.67373	K562	PRPF8
chr1	45097969	45098059	+	CDS,intron-Proximal	3.48599	5.97015	HepG2	EFTUD2
chr1	45098001	45098058	+	CDS,intron-Proximal	3.34707	3.12941	K562	UCHL5
chr1	45111031	45111083	+	CDS,intron-Proximal	4.28682	4.82767	HepG2	SF3B4
chr1	45097899	45098134	+	CDS,intron-Distal,intron-Proximal	4.64512	12.79935	HepG2	PRPF8
chr1	45110874	45110939	+	CDS,intron-Proximal	3.22774	4.38519	K562	BUD13
chr1	45097920	45098053	+	CDS,intron-Proximal	5.16522	10.34725	K562	EFTUD2
chr1	45110327	45110394	+	CDS,intron-Proximal	3.61716	6.71722	K562	SF3B4
chr1	45110903	45110974	+	CDS,intron-Proximal	3.97044	6.50183	HepG2	PRPF8
chr1	44936718	44936757	+	intron-Distal	7.99953	98.65890	HepG2	XPO5
chr1	44883925	44884006	+	intron-Distal	3.53792	6.13955	HepG2	FASTKD2
chr1	44930406	44930474	+	intron-Distal	3.51268	4.88761	HepG2	HNRNPL
chr1	44909031	44909111	+	intron-Distal	4.35192	3.73283	HepG2	HNRNPL
chr1	44878812	44878869	+	intron-Distal	3.15783	8.50128	HepG2	SUGP2
chr1	44916901	44916993	+	intron-Distal	4.55512	4.68586	HepG2	HNRNPL
chr1	44883644	44883714	+	intron-Distal	4.50587	6.08348	HepG2	CSTF2T
chr1	44992831	44992961	+	intron-Distal	3.85896	10.99111	HepG2	HNRNPL
chr1	44882710	44882735	+	intron-Distal	3.73296	5.35897	HepG2	PRPF4
chr1	44879911	44879966	+	intron-Distal	3.34345	8.11449	HepG2	SUGP2
chr1	45097904	45097969	+	intron-Distal,intron-Proximal	3.43263	5.51372	HepG2	EFTUD2
chr1	44883438	44883488	+	intron-Distal	4.63721	5.36376	HepG2	NKRF
chr1	44879114	44879166	+	intron-Distal	3.01654	4.54788	HepG2	SUGP2
chr1	44967776	44967883	+	intron-Distal	3.64302	17.57357	HepG2	HNRNPL
chr1	44930456	44930562	+	intron-Distal	3.49291	3.97172	HepG2	QKI
chr1	44927076	44927176	+	intron-Distal	5.66021	17.84551	HepG2	CSTF2
chr1	44938538	44938645	+	intron-Distal	4.13307	3.41738	HepG2	PTBP1
chr1	44911149	44911235	+	intron-Distal	4.56603	7.55717	HepG2	PTBP1
chr1	45111190	45111273	+	intron-Distal,intron-Proximal	5.43672	9.50259	HepG2	EFTUD2
chr1	44936709	44936718	+	intron-Distal	7.96434	96.41051	HepG2	XPO5
chr1	44992442	44992538	+	intron-Distal	4.29291	7.68255	HepG2	HNRNPL
chr1	44926258	44926425	+	intron-Distal	3.26891	3.59351	HepG2	SAFB
chr1	45018677	45018819	+	intron-Distal	5.31114	7.45191	HepG2	PTBP1
chr1	45004097	45004171	+	intron-Distal	3.99804	6.01170	HepG2	MATR3
chr1	44908953	44909067	+	intron-Distal	6.33800	35.37676	HepG2	QKI
chr1	44887301	44887362	+	intron-Distal	4.15908	3.57264	HepG2	GTF2F1
chr1	44910950	44911029	+	intron-Distal	3.41736	5.10768	HepG2	QKI
chr1	44882735	44882754	+	intron-Distal	3.24882	4.67313	HepG2	PRPF4
chr1	45023220	45023319	+	intron-Distal	3.99878	3.04956	HepG2	HNRNPL
chr1	45003678	45003772	+	intron-Distal	3.32156	7.22569	HepG2	SUGP2
chr1	44883967	44884030	+	intron-Distal	3.79458	6.67217	HepG2	PRPF4
chr1	44973131	44973213	+	intron-Distal	4.76060	3.39593	HepG2	PRPF4
chr1	44937650	44937718	+	intron-Distal	5.88933	8.98823	HepG2	CSTF2
chr1	44883896	44883941	+	intron-Distal	3.42222	4.07452	HepG2	PRPF4
chr1	44882704	44882813	+	intron-Distal	3.13643	4.99788	HepG2	NKRF
chr1	44910963	44911011	+	intron-Distal	3.41261	3.00914	HepG2	PTBP1
chr1	44991739	44991817	+	intron-Distal	4.18548	3.44037	HepG2	DDX59
chr1	45101456	45101502	+	intron-Distal	5.15831	5.02942	K562	EFTUD2
chr1	45083918	45084011	+	intron-Distal	4.97016	7.31716	HepG2	HNRNPL
chr1	45063104	45063233	+	intron-Distal	5.10844	8.88633	HepG2	HNRNPL
chr1	44936684	44936709	+	intron-Distal	4.97647	18.07611	HepG2	XPO5
chr1	44967883	44967926	+	intron-Distal	3.77174	4.23017	HepG2	HNRNPL
chr1	45013869	45013954	+	intron-Distal	4.40727	3.62238	HepG2	MATR3
chr1	44927212	44927329	+	intron-Distal	5.08860	5.65087	HepG2	CSTF2
chr1	44894340	44894413	+	intron-Distal	3.13924	4.23155	HepG2	MATR3
chr1	44992583	44992671	+	intron-Distal	3.87959	6.10762	HepG2	PTBP1
chr1	45047476	45047570	+	intron-Distal	4.38305	3.26547	HepG2	HLTF
chr1	44883787	44883896	+	intron-Distal	3.37965	4.67631	HepG2	PRPF4
chr1	44988794	44988894	+	intron-Distal	4.17259	3.27871	HepG2	SAFB
chr1	45037139	45037215	+	intron-Distal	3.98584	3.39864	HepG2	SUGP2
chr1	44936635	44936684	+	intron-Distal	3.71754	8.47479	HepG2	XPO5
chr1	44935232	44935312	+	intron-Distal	4.51993	4.21977	HepG2	HNRNPL
chr1	44873534	44873609	+	intron-Distal	5.43887	6.34931	HepG2	XPO5
chr1	44879782	44879867	+	intron-Distal	3.64722	5.12973	HepG2	MATR3
chr1	44909099	44909165	+	intron-Distal	5.56386	11.64245	HepG2	QKI
chr1	44910899	44910952	+	intron-Distal	3.14051	4.86294	HepG2	PTBP1
chr1	44992215	44992285	+	intron-Distal	4.41670	4.45537	HepG2	HNRNPL
chr1	45005429	45005534	+	intron-Distal	4.71433	4.80665	HepG2	QKI
chr1	44878604	44878686	+	intron-Distal	3.79053	4.28254	HepG2	MATR3
chr1	45098097	45098159	+	intron-Distal,intron-Proximal	5.41940	6.82887	HepG2	EFTUD2
chr1	45004080	45004160	+	intron-Distal	3.70509	4.19039	HepG2	PTBP1
chr1	44992384	44992446	+	intron-Distal	4.07234	8.82644	HepG2	PTBP1
chr1	44883583	44883642	+	intron-Distal	4.07523	4.10339	HepG2	CSTF2T
chr1	44879691	44879728	+	intron-Distal	3.68192	5.78794	HepG2	SUGP2
chr1	45099764	45099832	+	intron-Distal	3.13850	3.10640	HepG2	SUGP2
chr1	44887284	44887373	+	intron-Distal	4.21006	5.08364	HepG2	PRPF4
chr1	45013498	45013569	+	intron-Distal	3.25401	4.86332	HepG2	SUGP2
chr1	44879266	44879311	+	intron-Distal	3.45607	6.31916	HepG2	SUGP2
chr1	44925056	44925135	+	intron-Distal	3.15145	3.27276	HepG2	HNRNPL
chr1	44883875	44884008	+	intron-Distal	4.30384	6.35536	HepG2	GTF2F1
chr1	44971897	44972041	+	intron-Distal	3.94189	4.36184	HepG2	PRPF4
chr1	44871910	44871975	+	intron-Distal	3.07148	4.25828	HepG2	NKRF
chr1	44967672	44967760	+	intron-Distal	3.64044	18.92749	HepG2	HNRNPL
chr1	44968327	44968398	+	intron-Distal	4.27650	14.30201	HepG2	HNRNPL
chr1	45004956	45005078	+	intron-Distal	4.40727	3.62238	HepG2	MATR3
chr1	44882671	44882710	+	intron-Distal	5.05489	4.61288	HepG2	PRPF4
chr1	44910873	44910948	+	intron-Distal	4.67730	3.27829	HepG2	MATR3
chr1	44883938	44884025	+	intron-Distal	4.49789	5.24217	HepG2	RBM5
chr1	44882685	44882772	+	intron-Distal	3.25541	3.68010	HepG2	GTF2F1
chr1	44895019	44895114	+	intron-Distal	5.86492	10.31535	HepG2	QKI
chr1	45084923	45084984	+	intron-Distal	4.13053	5.07081	HepG2	XPO5
chr1	44943564	44943656	+	intron-Distal	3.44925	4.51074	HepG2	HNRNPL
chr1	44967593	44967672	+	intron-Distal	5.63421	10.91941	HepG2	HNRNPL
chr1	44894494	44894565	+	intron-Distal	3.13716	7.08259	HepG2	SUGP2
chr1	44883882	44884020	+	intron-Distal	4.82635	13.83545	HepG2	NKRF
chr1	44883888	44884003	+	intron-Distal	3.89796	5.44474	HepG2	FAM120A
chr1	44919662	44919806	+	intron-Distal	3.72141	5.35988	HepG2	HNRNPL
chr1	44992390	44992442	+	intron-Distal	3.43497	4.64467	HepG2	HNRNPL
chr1	44873547	44873596	+	intron-Distal	4.31318	4.62429	HepG2	NKRF
chr1	44910910	44911007	+	intron-Distal	4.23700	3.04956	HepG2	HNRNPL
chr1	45032135	45032196	+	intron-Distal	3.26410	4.04583	HepG2	XPO5
chr1	44904561	44904736	+	intron-Distal	3.52073	10.08916	HepG2	HNRNPL
chr1	44929216	44929278	+	intron-Distal	5.51774	9.40703	HepG2	CSTF2
chr1	45008216	45008313	+	intron-Distal	4.22864	4.03786	HepG2	NKRF
chr1	44882743	44882827	+	intron-Distal	4.67217	9.68807	HepG2	FUS
chr1	45084736	45084803	+	intron-Distal	4.39393	3.63122	HepG2	PRPF4
chr1	44909067	44909099	+	intron-Distal	6.14595	16.67573	HepG2	QKI
chr1	44936401	44936556	+	intron-Distal	4.68817	18.70354	HepG2	PTBP1
chr1	45097885	45097952	+	intron-Distal,intron-Proximal	4.26427	5.97994	K562	AQR
chr1	45018634	45018771	+	intron-Distal	3.49560	3.33633	HepG2	MATR3
chr1	44883927	44884005	+	intron-Distal	3.82125	5.39685	HepG2	CSTF2T
chr1	45115641	45115712	+	intron-Proximal	5.03958	6.46301	HepG2	PPIG
chr1	45111164	45111254	+	intron-Proximal	4.86236	7.63242	K562	EFTUD2
chr1	45101141	45101191	+	intron-Proximal	3.99494	3.82050	HepG2	SF3B4
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RNF220 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RNF220 is not available on ENCORE database.
78 RBPs can affect the levels of RNF220.

The Knockdown/knockout RNA-Seq assay for RNF220 is not available on ENCORE database.

78 RBPs can affect the gene expression of RNF220 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RNF220	ENSG00000187147.13	1747.74370	2299.01630	-0.39550	3.43760	2.39180	HepG2	ABCF1
RNF220	ENSG00000187147.13	1283.58960	1615.65650	-0.33190	4.83510	4.07310	HepG2	ACO1
RNF220	ENSG00000187147.13	1881.88830	2421.52910	-0.36370	2.68490	1.66190	HepG2	AKAP8
RNF220	ENSG00000187147.13	1426.98680	1615.30640	-0.17880	1.86500	1.30460	HepG2	CKAP4
RNF220	ENSG00000187147.13	734.04810	1269.51950	-0.79030	11.14740	9.89280	HepG2	DDX21
RNF220	ENSG00000187147.13	874.21810	1243.03000	-0.50780	5.64470	4.33910	HepG2	DDX24
RNF220	ENSG00000187147.13	1784.50150	2511.58650	-0.49310	4.63020	3.83620	HepG2	DDX3X
RNF220	ENSG00000187147.13	1066.66930	1545.74570	-0.53520	9.52300	8.41960	HepG2	DKC1
RNF220	ENSG00000187147.13	1521.28820	1085.56360	0.48670	7.31120	6.21140	HepG2	DNAJC21
RNF220	ENSG00000187147.13	1030.96370	1437.29610	-0.47940	3.03420	2.07030	HepG2	EEF2
RNF220	ENSG00000187147.13	931.40330	1199.32810	-0.36470	3.24750	2.08580	HepG2	EIF3G
RNF220	ENSG00000187147.13	1783.53580	2321.37310	-0.38020	2.68740	1.92850	HepG2	FIP1L1
RNF220	ENSG00000187147.13	1785.69860	2313.18690	-0.37340	2.99500	2.27390	HepG2	FXR1
RNF220	ENSG00000187147.13	1460.90980	2145.35160	-0.55430	5.27940	4.37320	HepG2	G3BP1
RNF220	ENSG00000187147.13	1786.29950	2278.17790	-0.35090	2.74730	1.86010	HepG2	G3BP2
RNF220	ENSG00000187147.13	826.18940	1178.99030	-0.51300	3.35760	2.22960	HepG2	GNB2L1
RNF220	ENSG00000187147.13	1227.49770	1536.39960	-0.32380	1.96120	1.41640	HepG2	GPKOW
RNF220	ENSG00000187147.13	822.03010	1095.96540	-0.41490	3.21510	2.52500	HepG2	HNRNPA1
RNF220	ENSG00000187147.13	1258.91290	1719.14500	-0.44950	5.25670	4.03820	HepG2	HNRNPA2B1
RNF220	ENSG00000187147.13	1970.64510	1564.21940	0.33310	4.74030	3.83270	HepG2	HNRNPF
RNF220	ENSG00000187147.13	1205.59780	1601.42180	-0.40960	4.47840	3.30020	HepG2	HNRNPM
RNF220	ENSG00000187147.13	1158.41530	2047.01050	-0.82140	3.12640	2.07790	HepG2	IGF2BP3
RNF220	ENSG00000187147.13	1658.03690	2193.55860	-0.40380	2.52080	1.57300	HepG2	KHSRP
RNF220	ENSG00000187147.13	1886.98240	2634.39200	-0.48140	3.21900	1.86720	HepG2	KRR1
RNF220	ENSG00000187147.13	1223.74160	2313.99850	-0.91910	13.76940	12.35230	HepG2	MAGOH
RNF220	ENSG00000187147.13	1683.22540	2326.80480	-0.46710	3.79120	3.06220	HepG2	MATR3
RNF220	ENSG00000187147.13	1224.19780	1878.40870	-0.61770	9.23730	7.84030	HepG2	MSI2
RNF220	ENSG00000187147.13	1335.77150	2381.49630	-0.83420	11.22120	9.98840	HepG2	NCBP2
RNF220	ENSG00000187147.13	1186.22980	1854.82180	-0.64490	11.50170	9.98890	HepG2	NOL12
RNF220	ENSG00000187147.13	1590.98370	1300.05200	0.29120	2.08570	1.43200	HepG2	NSUN2
RNF220	ENSG00000187147.13	1467.08430	2120.33670	-0.53130	5.11330	4.14400	HepG2	PABPC4
RNF220	ENSG00000187147.13	920.64440	1198.66310	-0.38070	2.90180	2.03680	HepG2	PARN
RNF220	ENSG00000187147.13	1870.43230	2190.36550	-0.22780	2.55600	1.96660	HepG2	PCBP1
RNF220	ENSG00000187147.13	543.96030	818.80760	-0.59000	5.06560	4.00620	HepG2	PRPF8
RNF220	ENSG00000187147.13	1303.16140	2228.87110	-0.77430	21.31200	20.07000	HepG2	PTBP1
RNF220	ENSG00000187147.13	1253.42270	1770.63250	-0.49840	5.68490	4.87050	HepG2	PUF60
RNF220	ENSG00000187147.13	1551.42050	1878.25060	-0.27580	2.41720	1.78980	HepG2	PUM2
RNF220	ENSG00000187147.13	1216.57270	1645.65110	-0.43580	7.76190	6.81670	HepG2	PUS1
RNF220	ENSG00000187147.13	1805.67780	2409.70360	-0.41630	2.26000	1.47530	HepG2	RBM15
RNF220	ENSG00000187147.13	1320.45780	2032.43250	-0.62220	12.19130	11.26230	HepG2	RBM22
RNF220	ENSG00000187147.13	1538.70910	2190.68560	-0.50970	6.70880	5.69950	HepG2	RBM25
RNF220	ENSG00000187147.13	1520.60710	2480.44290	-0.70600	18.89550	17.72800	HepG2	NELFE
RNF220	ENSG00000187147.13	1495.05950	2310.33460	-0.62790	15.30760	14.04790	HepG2	RECQL
RNF220	ENSG00000187147.13	2128.88280	1685.02920	0.33720	2.93750	2.23640	HepG2	RPLP0
RNF220	ENSG00000187147.13	944.63690	1284.89450	-0.44380	2.61750	1.83800	HepG2	RPS2
RNF220	ENSG00000187147.13	978.73990	1480.28250	-0.59690	3.17140	2.31590	HepG2	RPS3A
RNF220	ENSG00000187147.13	1381.64310	1078.46100	0.35730	4.00130	3.25000	HepG2	SAFB2
RNF220	ENSG00000187147.13	1847.89450	1451.27930	0.34850	2.97170	2.24060	HepG2	SF3B1
RNF220	ENSG00000187147.13	1729.19830	2320.37700	-0.42430	7.46790	6.57390	HepG2	SF3B4
RNF220	ENSG00000187147.13	638.41520	1614.79560	-1.33880	15.37400	13.54800	HepG2	SNRNP70
RNF220	ENSG00000187147.13	1210.17980	2422.03880	-1.00100	38.05270	36.74530	HepG2	SRSF1
RNF220	ENSG00000187147.13	1867.05600	1536.78960	0.28070	3.56560	2.78990	HepG2	SRSF7
RNF220	ENSG00000187147.13	1664.04190	1970.51580	-0.24390	2.94850	2.38260	HepG2	SRSF9
RNF220	ENSG00000187147.13	1262.80680	1993.09580	-0.65840	16.88090	15.83900	HepG2	SSB
RNF220	ENSG00000187147.13	1494.38790	1988.24930	-0.41190	7.12050	6.20260	HepG2	SUCLG1
RNF220	ENSG00000187147.13	1409.73250	2177.21040	-0.62710	12.38260	11.32570	HepG2	TAF15
RNF220	ENSG00000187147.13	1235.14590	2580.34040	-1.06290	7.06740	5.44570	HepG2	TBRG4
RNF220	ENSG00000187147.13	1638.27500	2000.36080	-0.28810	2.58470	1.77450	HepG2	TIA1
RNF220	ENSG00000187147.13	845.11820	1176.55480	-0.47730	4.34510	3.74730	HepG2	TIAL1
RNF220	ENSG00000187147.13	1645.48860	2020.64070	-0.29630	4.37390	3.52890	HepG2	UPF1
RNF220	ENSG00000187147.13	1098.03110	1505.10540	-0.45490	2.60380	1.57930	HepG2	XRCC6
RNF220	ENSG00000187147.13	1193.45700	1503.79230	-0.33350	4.84170	3.99430	HepG2	ZC3H8
RNF220	ENSG00000187147.13	1950.34300	2222.31390	-0.18830	2.46240	1.93800	HepG2	ZNF622
RNF220	ENSG00000187147.13	1021.27920	1275.25630	-0.32040	2.42940	1.32990	K562	AARS
RNF220	ENSG00000187147.13	1056.42290	1773.77740	-0.74760	14.05120	11.45310	K562	CCDC124
RNF220	ENSG00000187147.13	2072.22780	2354.01720	-0.18390	1.92510	1.36280	K562	DDX47
RNF220	ENSG00000187147.13	1978.84490	1661.96000	0.25170	2.59060	1.74770	K562	DKC1
RNF220	ENSG00000187147.13	1066.87710	786.56640	0.43970	2.34480	1.60890	K562	EIF3G
RNF220	ENSG00000187147.13	1156.85070	947.61240	0.28770	2.00750	1.30500	K562	EIF4A3
RNF220	ENSG00000187147.13	1066.16480	853.37460	0.32110	2.94530	1.74220	K562	EIF4B
RNF220	ENSG00000187147.13	3470.24090	2632.08830	0.39870	7.06100	5.57750	K562	EIF4G2
RNF220	ENSG00000187147.13	1105.19860	827.16790	0.41800	4.25430	2.60470	K562	EWSR1
RNF220	ENSG00000187147.13	2331.56890	1684.42530	0.46890	5.06110	3.88920	K562	FIP1L1
RNF220	ENSG00000187147.13	1436.90390	985.47670	0.54400	8.71910	7.71760	K562	FXR1
RNF220	ENSG00000187147.13	447.55640	750.88620	-0.74650	3.82460	2.96310	K562	G3BP2
RNF220	ENSG00000187147.13	2982.90370	2412.61980	0.30600	2.86160	2.09430	K562	GRSF1
RNF220	ENSG00000187147.13	1915.29580	1385.39150	0.46720	3.81010	2.70640	K562	HNRNPM
RNF220	ENSG00000187147.13	2912.44960	2283.82440	0.35070	3.05960	2.22460	K562	HSPD1
RNF220	ENSG00000187147.13	1357.40240	1038.96570	0.38560	3.64580	2.57320	K562	MATR3
RNF220	ENSG00000187147.13	1289.16140	926.27700	0.47680	3.02430	2.00400	K562	PCBP2
RNF220	ENSG00000187147.13	2357.95730	1912.05160	0.30230	2.30530	1.55760	K562	PPIG
RNF220	ENSG00000187147.13	1226.77140	1011.58770	0.27810	2.16480	1.56590	K562	PTBP1
RNF220	ENSG00000187147.13	3768.59450	3054.58070	0.30300	3.85220	2.57250	K562	PUM1
RNF220	ENSG00000187147.13	1235.98510	969.70860	0.34990	2.71780	1.88480	K562	RBM22
RNF220	ENSG00000187147.13	1570.13430	991.75150	0.66270	10.00760	8.67560	K562	SRSF1
RNF220	ENSG00000187147.13	1605.82870	2021.56310	-0.33220	2.48400	1.30160	K562	STAU1
RNF220	ENSG00000187147.13	1254.48010	2113.69170	-0.75270	3.30500	1.70200	K562	SUPT6H
RNF220	ENSG00000187147.13	1367.31490	1003.59180	0.44610	3.79420	2.95950	K562	TARDBP
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RNF220 is not available on ENCORE database.

11 RBPs can affect the splicing of RNF220 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	RNF220	ENSG00000187147.13	chr1	+	45115554	45115629	45115332	45115441	45116375	45116480	-0.05700	0.00137	0.02681	excluded	HepG2	U2AF1
SE	RNF220	ENSG00000187147.13	chr1	+	44881748	44881895	44877652	44878394	45079836	45079969	0.13900	0.00403	0.04469	included	HepG2	U2AF2
A3SS	RNF220	ENSG00000187147.13	chr1	+	45111044	45111160	45111081	45111160	45110857	45110948	0.08700	0.00000	0.00000	longer	K562	AQR
A3SS	RNF220	ENSG00000187147.13	chr1	+	45115554	45117395	45116375	45117395	45115332	45115441	-0.12400	0.00099	0.04001	shorter	HepG2	U2AF1
A5SS	RNF220	ENSG00000187147.13	chr1	+	45101170	45101313	45101170	45101260	45101701	45101834	0.09700	0.00095	0.01785	longer	K562	AQR
A5SS	RNF220	ENSG00000187147.13	chr1	+	45101216	45101338	45101216	45101260	45101701	45101834	-0.19200	0.00026	0.02790	shorter	HepG2	RBM22
A5SS	RNF220	ENSG00000187147.13	chr1	+	45101216	45101338	45101216	45101260	45101701	45101834	-0.30200	0.00000	0.00000	shorter	HepG2	SRSF1
A5SS	RNF220	ENSG00000187147.13	chr1	+	45101216	45101338	45101216	45101260	45101701	45101834	-0.26000	0.00002	0.00285	shorter	K562	HNRNPC
A5SS	RNF220	ENSG00000187147.13	chr1	+	45101216	45101338	45101216	45101260	45101701	45101834	-0.26600	0.00000	0.00001	shorter	K562	SRSF1
RI	RNF220	ENSG00000187147.13	chr1	+	45115554	45117395	45115554	45115629	45116375	45117395	0.06000	0.00029	0.00241	included	K562	PUS1
RI	RNF220	ENSG00000187147.13	chr1	+	45115554	45117395	45115554	45115629	45116375	45117395	0.10600	0.00000	0.00000	included	HepG2	QKI
RI	RNF220	ENSG00000187147.13	chr1	+	45115554	45117395	45115554	45115629	45116375	45117395	0.05800	0.00014	0.00201	included	K562	AKAP8L
RI	RNF220	ENSG00000187147.13	chr1	+	45115554	45117395	45115554	45115629	45116375	45117395	0.08000	0.00000	0.00000	included	HepG2	HNRNPK
RI	RNF220	ENSG00000187147.13	chr1	+	45115554	45117395	45115554	45115629	45116375	45117395	0.07300	0.00001	0.00039	included	K562	UTP18
RI	RNF220	ENSG00000187147.13	chr1	+	45115554	45117395	45115554	45115629	45116375	45117395	0.14700	0.00000	0.00000	included	K562	AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RNF220

General Information

Functions

Localization

Domains (AlphaFold: RNF220)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RNF220 is not avaliable on ENCORE database.

37 proteins are bound to RNF220 RNA:

eCLIP assay for RNF220 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RNF220 is not available on ENCORE database.

78 RBPs can affect the gene expression of RNF220 :

The Knockdown/knockout RNA-Seq assay for RNF220 is not available on ENCORE database.

11 RBPs can affect the splicing of RNF220 :

The Knockdown/knockout RNA-Seq assay for RNF220 is not avaliable on ENCORE database.