NOM1

General Information

Gene Name       : NOM1
Gene ID             : ENSG00000146909.7
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: NOM1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NOM1ENSG00000146909.713.6212.4213.02ENCSR000AEF
HepG2NOM1ENSG00000146909.714.1816.6815.43ENCSR985KAT
K562NOM1ENSG00000146909.728.6825.7227.20ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NOM1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • NOM1 RNA is bound by 23 proteins.  







eCLIP assay for NOM1 is not avaliable on ENCORE database.





23 proteins are bound to NOM1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr7156762390156762452+3'-UTR,CDS4.493893.02060K562LIN28B
chr7156762680156762742+3'-UTR4.368344.44583HepG2UPF1
chr7156762471156762526+3'-UTR3.108495.31375K562TARDBP
chr7156762535156762660+3'-UTR4.392943.54010K562UPF1
chr7156746955156746992+CDS4.944816.46917K562ZNF622
chr7156743380156743462+CDS,intron-Proximal3.366173.54718K562PRPF8
chr7156745274156745294+CDS,intron-Proximal4.030313.12746HepG2GRWD1
chr7156754906156754969+CDS,intron-Proximal5.107104.97342HepG2PPIG
chr7156742733156742778+CDS3.074973.84932K562ZNF800
chr7156743226156743286+CDS3.889936.14226K562ZNF622
chr7156743316156743418+CDS4.7070117.23204K562ZNF622
chr7156742503156742616+CDS3.680329.48271K562ZNF622
chr7156745266156745335+CDS,intron-Proximal3.108544.20336HepG2AQR
chr7156743215156743241+CDS4.933714.78571K562UCHL5
chr7156746795156746859+CDS,intron-Proximal4.772786.01390HepG2GRWD1
chr7156745172156745241+CDS4.455854.21087HepG2GRWD1
chr7156743379156743420+CDS,intron-Proximal4.906844.95959K562CPSF6
chr7156743288156743372+CDS5.7031921.40070K562UCHL5
chr7156742809156742881+CDS3.8107810.95315K562ZNF800
chr7156746859156746948+CDS3.920638.54758K562ZNF622
chr7156752792156752847+CDS3.715125.01703K562PUM1
chr7156742633156742776+CDS5.051788.78094HepG2GRWD1
chr7156754872156754957+CDS,intron-Proximal3.506025.41277K562UCHL5
chr7156742489156742617+CDS6.1588416.64708K562UCHL5
chr7156743236156743401+CDS4.0729811.12170K562SRSF1
chr7156745243156745296+CDS,intron-Proximal3.214509.46861K562PUM1
chr7156745167156745312+CDS,intron-Proximal3.704804.83522HepG2ZNF800
chr7156743341156743421+CDS,intron-Proximal4.480334.37348HepG2BCLAF1
chr7156746794156746860+CDS,intron-Proximal3.021253.80065HepG2PPIG
chr7156742670156742744+CDS4.1835810.57284K562UCHL5
chr7156742502156742546+CDS4.355328.30632K562PUM1
chr7156746812156746859+CDS4.1705911.38767K562ZNF622
chr7156742805156742875+CDS4.1831713.37474K562PUM1
chr7156743310156743411+CDS4.6060512.63647K562TRA2A
chr7156746795156746840+CDS,intron-Proximal3.586433.80498K562PUM1
chr7156754847156754952+CDS3.225075.59833HepG2GRWD1
chr7156743128156743173+CDS3.876333.22974K562TRA2A
chr7156742553156742701+CDS4.136116.70275K562RBM15
chr7156743309156743422+CDS,intron-Proximal4.130013.53509HepG2HLTF
chr7156752544156752592+CDS,intron-Proximal3.922563.31827HepG2GRWD1
chr7156752786156752882+CDS,intron-Proximal3.226115.62120K562ZNF622
chr7156743311156743380+CDS3.347493.61795HepG2SRSF1
chr7156742531156742599+CDS3.760343.34184HepG2GRWD1
chr7156755734156755857+CDS4.175963.16390K562SRSF1
chr7156742898156742963+CDS3.086978.96261K562PUM1
chr7156745166156745245+CDS,intron-Proximal5.9141130.04859K562ZNF622
chr7156742753156742805+CDS3.448787.21256K562PUM1
chr7156743273156743419+CDS,intron-Proximal4.840713.80886HepG2TRA2A
chr7156745164156745301+CDS,intron-Proximal3.7490712.44926K562GRWD1
chr7156743118156743182+CDS4.081819.52225K562UCHL5
chr7156743372156743433+CDS,intron-Proximal3.591967.25157HepG2AQR
chr7156745274156745293+CDS,intron-Proximal4.067343.06595HepG2BCLAF1
chr7156746791156746856+CDS,intron-Proximal3.286166.57674K562GRWD1
chr7156746760156746860+CDS,intron-Proximal3.022706.00494K562BUD13
chr7156746755156746849+CDS,intron-Proximal3.860664.98422K562PRPF8
chr7156752688156752786+CDS3.296586.75486K562UCHL5
chr7156745163156745266+CDS,intron-Proximal4.2853612.28603HepG2AQR
chr7156745165156745294+CDS,intron-Proximal5.2424338.39769K562UCHL5
chr7156754954156755030+CDS,intron-Proximal4.027314.15711K562AQR
chr7156759606156759661+CDS,intron-Proximal3.707605.35619K562AQR
chr7156743197156743310+CDS3.699947.20537K562TRA2A
chr7156742776156742907+CDS4.607956.10117HepG2GRWD1
chr7156759077156759140+CDS,intron-Proximal3.598687.76128K562PRPF8
chr7156745245156745295+CDS,intron-Proximal6.3526320.81735K562ZNF622
chr7156746795156746812+CDS,intron-Proximal3.442838.01252K562ZNF622
chr7156746751156746853+CDS,intron-Proximal3.6443716.81259K562AQR
chr7156746809156746863+CDS5.1508213.64917K562UCHL5
chr7156743372156743424+CDS,intron-Proximal6.6056721.17374K562UCHL5
chr7156761886156761943+CDS,intron-Proximal4.945565.26064K562AQR
chr7156745162156745247+CDS,intron-Proximal4.842194.95959K562CPSF6
chr7156743329156743415+CDS4.049053.12746HepG2GRWD1
chr7156743223156743419+CDS,intron-Proximal3.456994.64494K562SRSF7
chr7156743311156743401+CDS3.8785415.26978K562GRWD1
chr7156746795156746809+CDS,intron-Proximal4.181478.82687K562UCHL5
chr7156742538156742601+CDS4.344634.76200K562BUD13
chr7156752818156752861+CDS5.174835.50697K562UCHL5
chr7156745269156745322+CDS,intron-Proximal4.1390019.59669K562AQR
chr7156759078156759146+CDS,intron-Proximal6.0070819.55868HepG2PRPF8
chr7156755702156755888+CDS,intron-Proximal4.0178412.49287HepG2GRWD1
chr7156745162156745232+CDS,intron-Proximal3.998595.79432HepG2BCLAF1
chr7156756793156756850+intron-Distal,intron-Proximal3.590118.11972K562TIA1
chr7156747059156747169+intron-Distal,intron-Proximal4.089696.71940K562PRPF8
chr7156754176156754239+intron-Distal4.039843.48173K562GTF2F1
chr7156755992156756121+intron-Distal4.567874.79379K562KHSRP
chr7156747017156747158+intron-Distal,intron-Proximal3.971558.77805K562KHSRP
chr7156759834156759913+intron-Distal,intron-Proximal3.847435.64238K562PRPF8
chr7156745295156745387+intron-Proximal4.158653.54718K562PRPF8
chr7156755869156755924+intron-Proximal4.916115.69951K562AQR
chr7156745322156745369+intron-Proximal5.8748823.84012K562AQR
chr7156754964156754976+intron-Proximal3.324933.54718K562PRPF8
chr7156754980156755029+intron-Proximal5.1949515.40216K562RBM22
chr7156759097156759183+intron-Proximal3.392345.81258K562AQR
chr7156754976156755023+intron-Proximal4.371547.08156K562PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NOM1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NOM1 is not available on ENCORE database.

  • 80 RBPs can affect the levels of NOM1.  








The Knockdown/knockout RNA-Seq assay for NOM1 is not available on ENCORE database.





80 RBPs can affect the gene expression of NOM1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NOM1ENSG00000146909.3401.46390555.82730-0.469402.706601.93060HepG2ASCC1
NOM1ENSG00000146909.3999.819101162.72530-0.217801.914301.32370HepG2AUH
NOM1ENSG00000146909.3365.50290586.21480-0.681504.597903.46300HepG2BCLAF1
NOM1ENSG00000146909.3500.53510791.39920-0.660906.036505.05590HepG2CPSF6
NOM1ENSG00000146909.3376.77170573.49140-0.606106.071504.56020HepG2YBX3
NOM1ENSG00000146909.3779.38720941.12580-0.272002.784702.04020HepG2DAZAP1
NOM1ENSG00000146909.3395.92930574.29730-0.536604.716303.22120HepG2DDX1
NOM1ENSG00000146909.3497.34890643.51080-0.371701.923501.39260HepG2DDX3X
NOM1ENSG00000146909.3425.93460663.28300-0.639004.098103.17650HepG2DDX55
NOM1ENSG00000146909.3393.48380552.72350-0.490302.555001.96070HepG2DDX6
NOM1ENSG00000146909.3564.79360725.95830-0.362203.088302.37840HepG2DKC1
NOM1ENSG00000146909.3379.21170563.13370-0.570505.492604.53200HepG2DNAJC21
NOM1ENSG00000146909.3328.01110558.14920-0.7669010.771609.58220HepG2DNAJC2
NOM1ENSG00000146909.3697.16450889.37770-0.351302.362801.60810HepG2EIF4G2
NOM1ENSG00000146909.3820.25690592.469600.469203.231502.48540HepG2FXR1
NOM1ENSG00000146909.3667.55950897.13820-0.426402.613401.98880HepG2GPKOW
NOM1ENSG00000146909.3397.83680568.52860-0.515103.605202.88050HepG2HNRNPA1
NOM1ENSG00000146909.3666.19850864.88910-0.376603.787002.72050HepG2HNRNPA2B1
NOM1ENSG00000146909.3575.72760739.58670-0.361303.529002.72650HepG2HNRNPF
NOM1ENSG00000146909.3840.06980556.456000.594105.187504.25430HepG2HNRNPK
NOM1ENSG00000146909.3641.20000857.31400-0.419005.210204.31010HepG2HNRNPL
NOM1ENSG00000146909.3581.70800856.15320-0.557604.446103.66510HepG2HNRNPLL
NOM1ENSG00000146909.3586.26280728.27530-0.312902.241801.58610HepG2IGF2BP1
NOM1ENSG00000146909.3533.89810641.68450-0.265302.015501.37840HepG2ILF2
NOM1ENSG00000146909.3866.70460592.676100.548204.207103.40110HepG2MAGOH
NOM1ENSG00000146909.3806.19370596.008700.435702.545501.93820HepG2MATR3
NOM1ENSG00000146909.3357.74490560.30340-0.647306.834305.71710HepG2PPIL4
NOM1ENSG00000146909.3549.17400890.81650-0.697908.133107.18360HepG2PUF60
NOM1ENSG00000146909.3684.54960945.61910-0.466106.930706.07950HepG2PUM1
NOM1ENSG00000146909.3495.79420772.86970-0.640509.519908.49260HepG2PUS1
NOM1ENSG00000146909.3767.69140593.372600.371503.366502.69490HepG2RECQL
NOM1ENSG00000146909.3427.64920559.44070-0.387603.236802.55050HepG2SAFB2
NOM1ENSG00000146909.3454.95990847.43730-0.8974011.023909.70370HepG2SF3B1
NOM1ENSG00000146909.3729.28480854.10910-0.227901.930101.32600HepG2SLBP
NOM1ENSG00000146909.3533.25990726.64190-0.446404.880303.99650HepG2SRSF7
NOM1ENSG00000146909.3610.87660506.104900.271301.991201.50860HepG2SRSF9
NOM1ENSG00000146909.3842.804401094.15600-0.376504.711004.07760HepG2SSB
NOM1ENSG00000146909.3347.83280534.60060-0.620105.185203.91960HepG2SUPT6H
NOM1ENSG00000146909.3472.92210660.30530-0.481502.575901.92070HepG2SUPV3L1
NOM1ENSG00000146909.3880.29210559.178600.654608.999208.08210HepG2TAF15
NOM1ENSG00000146909.3639.81770834.41660-0.383102.526701.82940HepG2TARDBP
NOM1ENSG00000146909.3494.09760610.42680-0.305001.933401.49940HepG2TIAL1
NOM1ENSG00000146909.3428.27410615.86780-0.524105.522404.77760HepG2TRIM56
NOM1ENSG00000146909.31189.52460677.269800.812509.886608.68610HepG2U2AF1
NOM1ENSG00000146909.3642.81600810.37230-0.334203.246302.50120HepG2UPF1
NOM1ENSG00000146909.3974.99690782.385400.317402.992102.37390HepG2UTP3
NOM1ENSG00000146909.3451.88350649.99760-0.524503.205302.42730HepG2XRN2
NOM1ENSG00000146909.3672.81210891.25700-0.405605.197904.50760HepG2ZNF622
NOM1ENSG00000146909.34414.700602489.890100.8261016.0057014.75140K562AQR
NOM1ENSG00000146909.31249.122301560.95470-0.321502.619201.68800K562BCLAF1
NOM1ENSG00000146909.31004.048501544.26260-0.621106.831305.44030K562BOP1
NOM1ENSG00000146909.31108.214401550.15440-0.484206.251704.44740K562CCDC124
NOM1ENSG00000146909.3918.771201642.03790-0.8377013.0945011.37710K562CPSF6
NOM1ENSG00000146909.3869.516101184.21730-0.445603.874002.59740K562CSTF2
NOM1ENSG00000146909.3879.957701105.37530-0.329002.770401.72850K562DDX3X
NOM1ENSG00000146909.31465.202602069.94920-0.498508.817507.64400K562EIF2S2
NOM1ENSG00000146909.31147.964701500.05590-0.385902.274801.34790K562EIF3D
NOM1ENSG00000146909.31361.578201041.048900.387104.519603.51330K562EIF3G
NOM1ENSG00000146909.31418.249801154.800800.296402.126501.40260K562EIF4A3
NOM1ENSG00000146909.31378.772801854.28420-0.427504.213703.15100K562FIP1L1
NOM1ENSG00000146909.31078.971101670.65010-0.630807.714606.24290K562FMR1
NOM1ENSG00000146909.3999.967801415.99000-0.501903.412902.38890K562FTO
NOM1ENSG00000146909.31812.301301200.936800.5936011.1613010.03220K562FXR1
NOM1ENSG00000146909.31138.432101567.77700-0.461704.758003.72110K562GPKOW
NOM1ENSG00000146909.31854.247002758.43030-0.573008.561107.21470K562GRSF1
NOM1ENSG00000146909.3917.723101205.69830-0.393703.447102.79140K562HNRNPC
NOM1ENSG00000146909.31734.126502297.82130-0.406104.602603.20420K562HNRNPL
NOM1ENSG00000146909.31672.612502513.99050-0.587907.548406.25070K562HSPD1
NOM1ENSG00000146909.3851.186201338.59450-0.653205.088003.77250K562KRR1
NOM1ENSG00000146909.31815.152001363.476200.412704.458503.38570K562MAGOH
NOM1ENSG00000146909.31111.040301371.11690-0.303402.372301.40270K562MAK16
NOM1ENSG00000146909.31060.544201530.31050-0.529005.148203.93240K562METAP2
NOM1ENSG00000146909.31618.364001899.46450-0.231102.641601.85040K562MTPAP
NOM1ENSG00000146909.31761.131902110.49760-0.261104.423003.50430K562NSUN2
NOM1ENSG00000146909.3966.526201327.11790-0.457403.444301.39150K562PES1
NOM1ENSG00000146909.31585.212202105.00510-0.409103.883702.88760K562PPIG
NOM1ENSG00000146909.3851.467201388.67080-0.705706.909605.60580K562RPS19
NOM1ENSG00000146909.31748.852602082.48990-0.251902.905802.07320K562SF3A3
NOM1ENSG00000146909.31040.629801298.65870-0.319602.674501.97800K562SRSF1
NOM1ENSG00000146909.3984.777801226.49820-0.316702.253201.32440K562SRSF5
NOM1ENSG00000146909.3924.156601320.09220-0.514403.990002.75470K562SUPV3L1
NOM1ENSG00000146909.31518.741601211.749500.325703.115702.24340K562SYNCRIP
NOM1ENSG00000146909.3951.849401267.80920-0.413504.153903.12000K562TIA1
NOM1ENSG00000146909.3734.051301039.76570-0.502303.892702.77120K562TIAL1
NOM1ENSG00000146909.31673.986702331.55230-0.478009.664907.28610K562TROVE2
NOM1ENSG00000146909.31328.139001011.367100.393002.671801.60110K562U2AF1
NOM1ENSG00000146909.31361.486901044.372600.382404.027203.05840K562U2AF2
NOM1ENSG00000146909.3916.344401397.01980-0.608406.130804.54520K562UCHL5
NOM1ENSG00000146909.31686.312202237.80360-0.408207.845006.70850K562UPF1
NOM1ENSG00000146909.31453.390901914.82070-0.397804.376603.26680K562WDR3
NOM1ENSG00000146909.31108.328801422.34320-0.359902.469101.34790K562XRN2
NOM1ENSG00000146909.32025.235002805.09200-0.470005.764404.44530K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NOM1 is not available on ENCORE database.





6 RBPs can affect the splicing of NOM1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SENOM1ENSG00000146909.3chr7+1567512991567515501567468051567469921567525441567528120.104000.009750.08948includedHepG2U2AF2
SENOM1ENSG00000146909.3chr7+156745167156745292156742416156743418156746796156747035-0.085000.000000.00000excludedK562AQR
SENOM1ENSG00000146909.3chr7+156759594156759786156758963156759096156761780156761890-0.085000.003050.03102excludedK562AQR
SENOM1ENSG00000146909.3chr7+1567512991567515501567468051567469921567525441567526670.143000.000000.00027includedK562DROSHA
SENOM1ENSG00000146909.3chr7+156751299156751550156746805156746992156752544156752812-0.139000.000320.06149excludedK562FXR2
A3SSNOM1ENSG00000146909.3chr7+1567556831567558691567557011567558691567547991567549550.279000.000000.00000longerK562AQR
A5SSNOM1ENSG00000146909.3chr7+1567467961567470351567467961567469921567525441567526670.110000.000000.00000longerK562AQR
A5SSNOM1ENSG00000146909.3chr7+1567548641567550621567548641567549551567557011567568190.114000.000240.00554longerK562AQR
A5SSNOM1ENSG00000146909.3chr7+1567565511567567711567565511567567201567589631567591180.393000.000000.00000longerK562AQR
A5SSNOM1ENSG00000146909.3chr7+1567557011567559191567557011567558691567565981567567200.281000.000000.00000longerK562AQR
A5SSNOM1ENSG00000146909.3chr7+1567528021567529471567528021567528681567548441567549550.142000.000610.05775longerK562PRPF8
MXENOM1ENSG00000146909.3chr7+1567565981567567201567596541567597861567557011567558691567617801567618900.141000.010600.066341includedK562AQR
MXENOM1ENSG00000146909.3chr7+1567557011567558691567596541567597861567548441567549551567617801567618900.169000.001020.009251includedK562AQR
MXENOM1ENSG00000146909.3chr7+1567450431567452921567467961567469921567424161567434181567525441567528680.068000.000630.006051includedK562AQR
MXENOM1ENSG00000146909.3chr7+1567589631567590961567596541567597861567557011567558691567617801567618900.051000.001220.010881includedK562AQR
MXENOM1ENSG00000146909.3chr7+156745167156745279156746796156747035156742416156743418156752544156752868-0.086000.000000.000002includedK562AQR
MXENOM1ENSG00000146909.3chr7+156745167156745292156746796156747035156742416156743418156752544156752868-0.086000.000000.000002includedK562AQR
MXENOM1ENSG00000146909.3chr7+156755701156755869156756598156756720156754844156754955156758963156759096-0.251000.000010.001402includedK562PPIL4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for NOM1 is not avaliable on ENCORE database.