NFRKB

General Information

Gene Name : NFRKB
Gene ID : ENSG00000170322.14
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: NFRKB)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	NFRKB	ENSG00000170322.14	7.16	9.32	8.24	ENCSR000AEF
HepG2	NFRKB	ENSG00000170322.14	17.23	12.59	14.91	ENCSR985KAT
K562	NFRKB	ENSG00000170322.14	24.56	22.50	23.53	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for NFRKB is not avaliable on ENCORE database.

Proteins bound to RNA

NFRKB RNA is bound by 29 proteins.

CanvasJS.com

eCLIP assay for NFRKB is not avaliable on ENCORE database.

29 proteins are bound to NFRKB RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	129744414	129744523	-	CDS,intron-Distal,intron-Proximal	5.57061	37.33111	K562	SF3B4
chr11	129765360	129765417	-	5'-UTR,intron-Distal	4.92451	16.79021	HepG2	PRPF8
chr11	129765141	129765256	-	intron-Distal	4.58646	15.09924	HepG2	PRPF4
chr11	129754693	129754748	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.91772	13.44258	K562	RBM15
chr11	129744458	129744559	-	CDS,intron-Distal,intron-Proximal	5.56358	12.99258	K562	EFTUD2
chr11	129752411	129752480	-	CDS,intron-Distal	4.18017	12.82496	HepG2	BCLAF1
chr11	129758534	129758624	-	CDS,intron-Distal,intron-Proximal	4.40715	12.74895	K562	ZNF622
chr11	129762661	129762745	-	CDS,intron-Distal	5.06483	12.29445	HepG2	PPIG
chr11	129751980	129752038	-	CDS,intron-Distal,intron-Proximal	4.07792	12.21730	HepG2	BCLAF1
chr11	129752968	129753044	-	CDS,intron-Distal,intron-Proximal	4.19769	11.17766	HepG2	PRPF8
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 111 entries

eCLIP assay for NFRKB is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for NFRKB is not available on ENCORE database.
54 RBPs can affect the levels of NFRKB.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for NFRKB is not available on ENCORE database.

54 RBPs can affect the gene expression of NFRKB :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
NFRKB	ENSG00000170322.10	1632.82380	1043.38260	0.64600	11.02960	9.90150	HepG2	QKI
NFRKB	ENSG00000170322.10	1215.08270	674.42460	0.84920	10.99060	9.47010	HepG2	FUBP3
NFRKB	ENSG00000170322.10	2426.20580	1736.37850	0.48250	10.20880	9.20840	K562	AGGF1
NFRKB	ENSG00000170322.10	1338.77250	1951.96120	-0.54400	10.14040	8.89550	K562	EIF2S2
NFRKB	ENSG00000170322.10	427.72890	816.13780	-0.93210	9.01860	7.91240	HepG2	SUPV3L1
NFRKB	ENSG00000170322.10	1380.79280	941.09560	0.55300	8.71780	7.81250	HepG2	TAF15
NFRKB	ENSG00000170322.10	1472.27420	906.58510	0.69940	8.54400	7.36910	HepG2	HNRNPK
NFRKB	ENSG00000170322.10	865.97610	1187.67490	-0.45570	6.99070	6.08860	HepG2	PUS1
NFRKB	ENSG00000170322.10	1242.43500	816.71830	0.60520	6.71240	5.67130	HepG2	HNRNPC
NFRKB	ENSG00000170322.10	1765.59580	1226.31890	0.52570	6.55020	5.67050	K562	HNRNPC
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 59 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for NFRKB is not available on ENCORE database.

13 RBPs can affect the splicing of NFRKB :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	NFRKB	ENSG00000170322.10	chr11	-	129763191	129763280	129762609	129762765	129764253	129764333	-0.62300	0.00000	0.00000	excluded	K562	SRSF1
SE	NFRKB	ENSG00000170322.10	chr11	-	129763191	129763280	129762609	129762765	129764253	129764333	0.54200	0.00000	0.00017	included	HepG2	HNRNPC
A3SS	NFRKB	ENSG00000170322.10	chr11	-	129744395	129744596	129744395	129744475	129744687	129744811	0.16100	0.00000	0.00043	longer	K562	HNRNPUL1
A3SS	NFRKB	ENSG00000170322.10	chr11	-	129739987	129740176	129739987	129740156	129742778	129742958	0.27000	0.00000	0.00000	longer	K562	AQR
A3SS	NFRKB	ENSG00000170322.10	chr11	-	129734860	129735088	129734860	129734996	129735771	129735878	0.09400	0.00000	0.00000	longer	K562	AQR
A3SS	NFRKB	ENSG00000170322.10	chr11	-	129742778	129743016	129742778	129742991	129743639	129743910	0.18200	0.00000	0.00003	longer	K562	AQR
A3SS	NFRKB	ENSG00000170322.10	chr11	-	129744395	129744596	129744395	129744475	129744687	129744811	0.28000	0.00000	0.00393	longer	HepG2	TIA1
A3SS	NFRKB	ENSG00000170322.10	chr11	-	129754639	129754777	129754639	129754741	129755329	129755504	-0.46600	0.00009	0.07476	shorter	HepG2	EFTUD2
A3SS	NFRKB	ENSG00000170322.10	chr11	-	129744395	129744596	129744395	129744475	129744687	129744811	-0.13800	0.00010	0.03910	shorter	HepG2	TBRG4
SE	NFRKB	ENSG00000170322.10	chr11	-	129754880	129754990	129754639	129754741	129755329	129755504	-0.30500	0.00015	0.02275	excluded	HepG2	LARP4

Showing 1 to 10 of 22 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

NFRKB

General Information

Functions

Localization

Domains (AlphaFold: NFRKB)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for NFRKB is not avaliable on ENCORE database.

29 proteins are bound to NFRKB RNA:

eCLIP assay for NFRKB is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for NFRKB is not available on ENCORE database.

54 RBPs can affect the gene expression of NFRKB :

The Knockdown/knockout RNA-Seq assay for NFRKB is not available on ENCORE database.

13 RBPs can affect the splicing of NFRKB :

The Knockdown/knockout RNA-Seq assay for NFRKB is not avaliable on ENCORE database.