NAA35

General Information

Gene Name : NAA35
Gene ID : ENSG00000135040.15
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: NAA35)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	NAA35	ENSG00000135040.15	23.63	20.92	22.27	ENCSR000AEF
HepG2	NAA35	ENSG00000135040.15	16.09	23.65	19.87	ENCSR985KAT
K562	NAA35	ENSG00000135040.15	22.19	23.40	22.80	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for NAA35 is not avaliable on ENCORE database.

Proteins bound to RNA

NAA35 RNA is bound by 18 proteins.

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eCLIP assay for NAA35 is not avaliable on ENCORE database.

18 proteins are bound to NAA35 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr9	88615808	88615908	+	intron-Distal	4.23381	15.09992	K562	EXOSC5
chr9	88615743	88615783	+	intron-Distal	4.87309	13.19705	K562	EXOSC5
chr9	88590042	88590121	+	CDS,intron-Proximal	5.62117	11.43008	HepG2	PRPF8
chr9	88632343	88632399	+	intron-Proximal	4.52371	10.68651	K562	SF3B4
chr9	88616122	88616179	+	intron-Distal	4.64684	10.61559	K562	EXOSC5
chr9	88591565	88591652	+	CDS,intron-Proximal	3.98817	9.95582	K562	SF3B4
chr9	88589900	88589947	+	CDS	3.57620	9.41803	HepG2	BCLAF1
chr9	88583593	88583740	+	intron-Distal	4.71349	9.10637	HepG2	QKI
chr9	88590028	88590070	+	CDS,intron-Proximal	4.01287	8.79898	HepG2	BCLAF1
chr9	88591601	88591639	+	CDS	4.34992	7.97334	HepG2	BCLAF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 56 entries

eCLIP assay for NAA35 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for NAA35 is not available on ENCORE database.
59 RBPs can affect the levels of NAA35.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for NAA35 is not available on ENCORE database.

59 RBPs can affect the gene expression of NAA35 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
NAA35	ENSG00000135040.11	646.12830	1312.62090	-1.02260	18.24230	16.23390	K562	GRSF1
NAA35	ENSG00000135040.11	365.47040	820.66160	-1.16700	14.00290	12.67180	HepG2	GPKOW
NAA35	ENSG00000135040.11	1028.29050	625.99980	0.71590	11.82350	10.99180	HepG2	SRSF1
NAA35	ENSG00000135040.11	1015.80640	625.86870	0.69860	12.00310	10.89140	HepG2	UTP3
NAA35	ENSG00000135040.11	1233.56320	650.20910	0.92380	9.97420	9.03060	HepG2	AKAP1
NAA35	ENSG00000135040.11	919.80980	1512.77430	-0.71780	9.01640	8.05500	K562	AQR
NAA35	ENSG00000135040.11	490.94380	772.16130	-0.65330	7.60450	6.46000	HepG2	IGF2BP1
NAA35	ENSG00000135040.11	605.99910	953.33550	-0.65370	7.18660	5.90600	K562	GPKOW
NAA35	ENSG00000135040.11	971.30290	1328.27790	-0.45160	6.79200	5.72220	K562	UPF1
NAA35	ENSG00000135040.11	943.38410	1252.70610	-0.40910	6.59310	5.50840	K562	NSUN2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 69 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for NAA35 is not available on ENCORE database.

12 RBPs can affect the splicing of NAA35 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	NAA35	ENSG00000135040.11	chr9	+	88627960	88628059	88624779	88624846	88628633	88628812	-0.22300	0.00000	0.00001	excluded	K562	AQR
SE	NAA35	ENSG00000135040.11	chr9	+	88627960	88628059	88624779	88624846	88628633	88628812	-0.29800	0.00000	0.00006	excluded	K562	PUS1
SE	NAA35	ENSG00000135040.11	chr9	+	88627960	88628059	88624779	88624846	88628633	88628812	-0.50800	0.00000	0.00000	excluded	K562	U2AF1
SE	NAA35	ENSG00000135040.11	chr9	+	88627960	88628059	88624779	88624846	88628633	88628812	-0.53500	0.00000	0.00000	excluded	K562	U2AF2
A5SS	NAA35	ENSG00000135040.11	chr9	+	88556096	88556320	88556096	88556188	88557069	88557198	0.39500	0.00000	0.04051	longer	K562	DDX6
SE	NAA35	ENSG00000135040.11	chr9	+	88627960	88628059	88624779	88624846	88628633	88628812	-0.27900	0.00001	0.00054	excluded	K562	SF3B4
A5SS	NAA35	ENSG00000135040.11	chr9	+	88631453	88631665	88631453	88631590	88632412	88632480	0.13900	0.00005	0.00135	longer	K562	AQR
A5SS	NAA35	ENSG00000135040.11	chr9	+	88556096	88556320	88556096	88556188	88557069	88557198	-0.21200	0.00012	0.08522	shorter	K562	HNRNPL
A5SS	NAA35	ENSG00000135040.11	chr9	+	88591599	88591750	88591599	88591650	88592277	88592361	-0.11200	0.00024	0.03916	shorter	HepG2	AKAP1
A5SS	NAA35	ENSG00000135040.11	chr9	+	88592277	88592487	88592277	88592361	88593181	88593296	0.23800	0.00029	0.04968	longer	HepG2	PRPF8

Showing 1 to 10 of 22 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

NAA35

General Information

Functions

Localization

Domains (AlphaFold: NAA35)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for NAA35 is not avaliable on ENCORE database.

18 proteins are bound to NAA35 RNA:

eCLIP assay for NAA35 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for NAA35 is not available on ENCORE database.

59 RBPs can affect the gene expression of NAA35 :

The Knockdown/knockout RNA-Seq assay for NAA35 is not available on ENCORE database.

12 RBPs can affect the splicing of NAA35 :

The Knockdown/knockout RNA-Seq assay for NAA35 is not avaliable on ENCORE database.