KCNE3

General Information

Gene Name : KCNE3
Gene ID : ENSG00000175538.10
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: KCNE3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	KCNE3	ENSG00000175538.10	0.00	0.00	0.00	ENCSR000AEF
HepG2	KCNE3	ENSG00000175538.10	2.89	1.89	2.39	ENCSR985KAT
K562	KCNE3	ENSG00000175538.10	6.06	5.32	5.69	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for KCNE3 is not avaliable on ENCORE database.

Proteins bound to RNA

KCNE3 RNA is bound by 1 proteins.

CanvasJS.com

eCLIP assay for KCNE3 is not avaliable on ENCORE database.

1 proteins are bound to KCNE3 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	74167325	74167378	-	3'-UTR,intron-Distal	4.42672	12.03763	K562	UPF1
chr11	74167245	74167276	-	3'-UTR,intron-Distal	4.19013	3.69433	K562	UPF1
chr11	74167113	74167177	-	3'-UTR,intron-Distal	5.13033	7.60978	K562	UPF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for KCNE3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for KCNE3 is not available on ENCORE database.
104 RBPs can affect the levels of KCNE3.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for KCNE3 is not available on ENCORE database.

104 RBPs can affect the gene expression of KCNE3 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
KCNE3	ENSG00000175538.6	18.42350	188.81160	-3.35730	24.38980	22.98390	HepG2	AKAP1
KCNE3	ENSG00000175538.6	94.19510	35.55010	1.40570	3.71990	2.84330	HepG2	AKAP8L
KCNE3	ENSG00000175538.6	302.24760	156.22210	0.95200	6.12100	4.97470	HepG2	ASCC1
KCNE3	ENSG00000175538.6	105.13210	59.25620	0.82710	2.70680	2.02780	HepG2	AUH
KCNE3	ENSG00000175538.6	114.64010	42.53520	1.43030	4.93620	3.76540	HepG2	BCLAF1
KCNE3	ENSG00000175538.6	4.30330	36.67370	-3.09120	5.58930	4.77480	HepG2	BOP1
KCNE3	ENSG00000175538.6	387.87710	148.42290	1.38580	13.28660	11.73180	HepG2	CIRBP
KCNE3	ENSG00000175538.6	80.01490	35.37470	1.17750	3.83560	3.07700	HepG2	CKAP4
KCNE3	ENSG00000175538.6	344.13890	51.18400	2.74910	16.23630	14.44100	HepG2	CNOT7
KCNE3	ENSG00000175538.6	234.56030	82.08490	1.51470	13.82210	12.59980	HepG2	CELF1
KCNE3	ENSG00000175538.6	137.05160	88.26280	0.63470	2.49570	1.78580	HepG2	DAZAP1
KCNE3	ENSG00000175538.6	338.80610	180.85950	0.90550	5.87240	4.99280	HepG2	DDX3X
KCNE3	ENSG00000175538.6	123.62240	50.90820	1.27990	5.61790	3.81750	HepG2	DDX47
KCNE3	ENSG00000175538.6	257.20460	155.38030	0.72700	3.23390	2.57200	HepG2	DDX6
KCNE3	ENSG00000175538.6	121.67440	52.92790	1.20080	2.08260	1.46370	HepG2	DNAJC21
KCNE3	ENSG00000175538.6	57.34920	165.04360	-1.52500	8.38900	7.27780	HepG2	EIF4A3
KCNE3	ENSG00000175538.6	80.11770	160.70980	-1.00430	3.60590	2.82600	HepG2	EIF4B
KCNE3	ENSG00000175538.6	127.92170	44.68680	1.51720	6.26700	3.46510	HepG2	FASTKD1
KCNE3	ENSG00000175538.6	98.38070	40.06230	1.29600	3.89300	2.40360	HepG2	FKBP4
KCNE3	ENSG00000175538.6	35.71920	74.07050	-1.05220	2.63330	1.54370	HepG2	FUS
KCNE3	ENSG00000175538.6	58.67320	166.54850	-1.50520	8.15530	7.01470	HepG2	FXR1
KCNE3	ENSG00000175538.6	55.82520	164.02300	-1.55490	8.40120	6.83110	HepG2	G3BP2
KCNE3	ENSG00000175538.6	150.98930	70.99270	1.08860	3.87960	2.21800	HepG2	HLTF
KCNE3	ENSG00000175538.6	201.62420	81.11540	1.31350	9.59230	8.05160	HepG2	HNRNPA2B1
KCNE3	ENSG00000175538.6	13.87750	42.26720	-1.60680	3.17400	1.67160	HepG2	HNRNPAB
KCNE3	ENSG00000175538.6	20.36710	59.43760	-1.54510	3.46570	2.69530	HepG2	HNRNPC
KCNE3	ENSG00000175538.6	74.82090	156.46180	-1.06430	4.50360	3.63120	HepG2	HNRNPK
KCNE3	ENSG00000175538.6	53.87770	25.50330	1.07890	2.36530	1.48500	HepG2	HNRNPM
KCNE3	ENSG00000175538.6	176.32470	59.04460	1.57830	11.64440	10.47230	HepG2	HNRNPU
KCNE3	ENSG00000175538.6	88.42910	157.02490	-0.82840	3.16630	2.44960	HepG2	IGF2BP2
KCNE3	ENSG00000175538.6	16.40080	147.38100	-3.16770	11.53260	9.65450	HepG2	IGF2BP3
KCNE3	ENSG00000175538.6	417.35090	157.94950	1.40170	11.96850	9.80650	HepG2	KHSRP
KCNE3	ENSG00000175538.6	35.52000	104.56390	-1.55770	2.34460	1.58450	HepG2	LARP4
KCNE3	ENSG00000175538.6	36.21110	71.79520	-0.98750	2.44130	1.38060	HepG2	LARP7
KCNE3	ENSG00000175538.6	33.62830	75.37820	-1.16450	3.13940	1.84640	HepG2	LIN28B
KCNE3	ENSG00000175538.6	55.21420	166.60680	-1.59330	8.93790	7.77210	HepG2	MAGOH
KCNE3	ENSG00000175538.6	42.44960	167.53490	-1.98060	11.28880	10.07780	HepG2	MATR3
KCNE3	ENSG00000175538.6	165.17180	29.92220	2.46460	16.84450	15.04540	HepG2	MSI2
KCNE3	ENSG00000175538.6	63.08180	25.12010	1.32830	3.70490	2.29840	HepG2	NAA15
KCNE3	ENSG00000175538.6	75.62190	171.47780	-1.18110	5.73680	4.84010	HepG2	NCBP2
KCNE3	ENSG00000175538.6	102.67270	44.20390	1.21570	3.19760	2.01760	HepG2	NONO
KCNE3	ENSG00000175538.6	79.49820	152.69610	-0.94170	3.89080	3.04610	HepG2	PABPC4
KCNE3	ENSG00000175538.6	110.58980	163.96920	-0.56820	2.38170	1.80980	HepG2	PCBP1
KCNE3	ENSG00000175538.6	16.19230	45.90130	-1.50320	3.14830	1.52800	HepG2	PNPT1
KCNE3	ENSG00000175538.6	260.50840	166.82970	0.64290	3.49980	2.90020	HepG2	PTBP1
KCNE3	ENSG00000175538.6	37.12510	88.68760	-1.25630	4.59010	3.86760	HepG2	PUM1
KCNE3	ENSG00000175538.6	142.62360	88.62310	0.68640	2.45590	1.82440	HepG2	PUM2
KCNE3	ENSG00000175538.6	244.98970	36.04670	2.76470	22.35910	20.91690	HepG2	PUS1
KCNE3	ENSG00000175538.6	761.31450	180.71290	2.07470	47.92250	45.94350	HepG2	QKI
KCNE3	ENSG00000175538.6	27.68550	67.66590	-1.28930	2.65260	1.96190	HepG2	RAVER1
KCNE3	ENSG00000175538.6	82.74560	163.99640	-0.98690	4.84060	3.97090	HepG2	RBM25
KCNE3	ENSG00000175538.6	47.98810	86.57410	-0.85130	2.29650	1.40150	HepG2	RBM27
KCNE3	ENSG00000175538.6	56.00000	185.67800	-1.72930	12.38020	11.39060	HepG2	NELFE
KCNE3	ENSG00000175538.6	72.20690	172.91100	-1.25980	7.56550	6.62030	HepG2	RECQL
KCNE3	ENSG00000175538.6	59.36570	173.71840	-1.54900	10.14580	9.11910	HepG2	SF3B4
KCNE3	ENSG00000175538.6	132.94660	40.12540	1.72820	2.71900	1.94430	HepG2	SNRNP70
KCNE3	ENSG00000175538.6	44.83890	181.31330	-2.01570	15.05820	14.14370	HepG2	SRSF1
KCNE3	ENSG00000175538.6	137.71700	37.81440	1.86460	8.87360	6.55630	HepG2	SUGP2
KCNE3	ENSG00000175538.6	64.60030	162.94070	-1.33470	7.82740	6.96240	HepG2	TAF15
KCNE3	ENSG00000175538.6	177.97690	67.94360	1.38920	6.63960	4.43110	HepG2	TRA2A
KCNE3	ENSG00000175538.6	91.97590	57.88600	0.66790	1.87650	1.39420	HepG2	TRIM56
KCNE3	ENSG00000175538.6	105.18600	26.57030	1.98500	10.31230	9.11470	HepG2	UPF1
KCNE3	ENSG00000175538.6	98.81270	27.30860	1.85520	8.41720	6.70490	HepG2	UTP18
KCNE3	ENSG00000175538.6	14.21330	44.97660	-1.66190	3.64260	2.88940	HepG2	ZC3H8
KCNE3	ENSG00000175538.6	83.87580	29.22190	1.52110	5.87720	5.15810	HepG2	ZNF622
KCNE3	ENSG00000175538.6	103.41940	176.84120	-0.77390	3.27910	1.97870	K562	AARS
KCNE3	ENSG00000175538.6	100.39330	472.04390	-2.23330	15.66250	14.42580	K562	AGGF1
KCNE3	ENSG00000175538.6	342.45010	518.61680	-0.59880	2.58850	1.64410	K562	AKAP8
KCNE3	ENSG00000175538.6	121.59350	491.16140	-2.01410	12.14470	10.64310	K562	AKAP8L
KCNE3	ENSG00000175538.6	159.57720	365.73490	-1.19650	9.04960	8.08640	K562	AQR
KCNE3	ENSG00000175538.6	246.17930	515.30560	-1.06570	6.71130	5.20510	K562	ATP5C1
KCNE3	ENSG00000175538.6	127.18300	247.36600	-0.95970	6.58360	4.42840	K562	BCCIP
KCNE3	ENSG00000175538.6	370.74900	564.18870	-0.60570	3.08480	1.83010	K562	CCDC124
KCNE3	ENSG00000175538.6	548.39200	327.32570	0.74440	3.87000	2.57390	K562	CNOT7
KCNE3	ENSG00000175538.6	250.69830	352.60990	-0.49210	3.09050	1.91620	K562	CPEB4
KCNE3	ENSG00000175538.6	330.22650	233.95750	0.49710	2.50490	1.35670	K562	DDX21
KCNE3	ENSG00000175538.6	185.55490	364.91310	-0.97570	10.10030	8.94560	K562	DDX47
KCNE3	ENSG00000175538.6	298.78570	528.66060	-0.82320	4.56520	3.40040	K562	DKC1
KCNE3	ENSG00000175538.6	63.03800	139.89520	-1.15010	2.36870	1.44460	K562	EIF3A
KCNE3	ENSG00000175538.6	125.12270	244.60120	-0.96710	5.37980	3.87480	K562	EIF3D
KCNE3	ENSG00000175538.6	120.26220	202.96610	-0.75510	4.02870	3.07810	K562	EIF3G
KCNE3	ENSG00000175538.6	89.65750	153.03460	-0.77140	3.21520	2.33330	K562	EIF4A3
KCNE3	ENSG00000175538.6	230.21290	160.33610	0.52180	2.10060	1.31000	K562	FTO
KCNE3	ENSG00000175538.6	118.76850	179.43130	-0.59530	2.96620	1.57010	K562	FUS
KCNE3	ENSG00000175538.6	106.37960	159.14930	-0.58120	2.18650	1.63720	K562	FXR1
KCNE3	ENSG00000175538.6	332.73160	177.55500	0.90600	6.60940	5.38620	K562	GPKOW
KCNE3	ENSG00000175538.6	188.14490	397.26310	-1.07830	5.00470	3.20970	K562	HNRNPA2B1
KCNE3	ENSG00000175538.6	127.54040	193.47670	-0.60120	2.33810	1.78300	K562	HNRNPC
KCNE3	ENSG00000175538.6	97.16120	182.87400	-0.91240	2.37790	1.51770	K562	HNRNPM
KCNE3	ENSG00000175538.6	549.83330	301.32780	0.86760	7.17670	5.90850	K562	HSPD1
KCNE3	ENSG00000175538.6	145.12060	254.44770	-0.81010	4.02840	2.69400	K562	IGF2BP2
KCNE3	ENSG00000175538.6	127.70360	258.74380	-1.01870	7.73600	5.61740	K562	IGF2BP3
KCNE3	ENSG00000175538.6	232.76610	138.83030	0.74550	3.60240	1.91030	K562	KHDRBS1
KCNE3	ENSG00000175538.6	240.85630	521.32090	-1.11400	5.94810	4.63400	K562	KIF1C
KCNE3	ENSG00000175538.6	116.32140	196.25110	-0.75460	3.26000	1.64190	K562	LIN28B
KCNE3	ENSG00000175538.6	110.77260	267.25630	-1.27060	11.14410	9.37960	K562	MAGOH
KCNE3	ENSG00000175538.6	269.71850	498.97080	-0.88750	3.40790	2.17580	K562	MAK16
KCNE3	ENSG00000175538.6	267.95880	584.00050	-1.12400	4.26980	3.09870	K562	MBNL1
KCNE3	ENSG00000175538.6	123.59250	409.33540	-1.72770	7.67730	5.91740	K562	NAA15
KCNE3	ENSG00000175538.6	314.05690	469.35190	-0.57960	3.93930	2.13820	K562	NOL12
KCNE3	ENSG00000175538.6	412.87380	294.48050	0.48740	3.68600	2.83830	K562	NSUN2
KCNE3	ENSG00000175538.6	161.95260	347.61240	-1.10190	4.81320	3.40350	K562	PABPN1
KCNE3	ENSG00000175538.6	158.25460	261.31690	-0.72360	3.81340	2.21690	K562	PCBP1
KCNE3	ENSG00000175538.6	116.56010	237.76300	-1.02850	6.52360	5.00560	K562	PCBP2
KCNE3	ENSG00000175538.6	157.62480	277.07930	-0.81380	4.47560	3.41910	K562	PCBP3
KCNE3	ENSG00000175538.6	98.62320	212.53640	-1.10770	7.15000	5.87560	K562	POLR2G
KCNE3	ENSG00000175538.6	73.16250	222.29010	-1.60330	10.86810	9.36790	K562	PRPF8
KCNE3	ENSG00000175538.6	98.86630	259.66810	-1.39310	13.08340	11.69600	K562	PTBP1
KCNE3	ENSG00000175538.6	335.14130	468.14850	-0.48220	3.02720	2.17330	K562	PUF60
KCNE3	ENSG00000175538.6	280.15330	497.98710	-0.82990	8.45680	6.50760	K562	PUM1
KCNE3	ENSG00000175538.6	375.91060	487.89020	-0.37620	2.38110	1.48930	K562	PUM2
KCNE3	ENSG00000175538.6	66.84540	487.25220	-2.86580	19.99630	18.56440	K562	PUS1
KCNE3	ENSG00000175538.6	130.36140	474.62550	-1.86430	11.52570	10.32820	K562	RBM15
KCNE3	ENSG00000175538.6	124.57450	199.88670	-0.68220	3.75580	1.92200	K562	RPS10
KCNE3	ENSG00000175538.6	104.27180	226.44190	-1.11880	6.09050	4.87330	K562	RPS19
KCNE3	ENSG00000175538.6	91.80870	190.22960	-1.05100	4.71940	2.67180	K562	SERBP1
KCNE3	ENSG00000175538.6	81.65760	317.96930	-1.96120	9.83900	7.11580	K562	SF1
KCNE3	ENSG00000175538.6	79.99120	151.53860	-0.92180	4.41430	3.32360	K562	SF3B4
KCNE3	ENSG00000175538.6	152.62560	365.06110	-1.25810	5.89080	3.88050	K562	SNRNP200
KCNE3	ENSG00000175538.6	92.23240	254.57900	-1.46480	11.78500	10.33180	K562	SRSF1
KCNE3	ENSG00000175538.6	127.99820	213.16970	-0.73590	3.75650	2.79950	K562	SYNCRIP
KCNE3	ENSG00000175538.6	80.59370	141.28920	-0.80990	2.83880	1.73140	K562	U2AF1
KCNE3	ENSG00000175538.6	180.14060	493.86630	-1.45500	4.93490	3.04130	K562	UTP18
KCNE3	ENSG00000175538.6	158.75940	324.25070	-1.03030	7.82970	5.88470	K562	UTP3
KCNE3	ENSG00000175538.6	204.89750	277.81090	-0.43920	2.47020	1.66810	K562	WDR43
KCNE3	ENSG00000175538.6	84.37530	160.08080	-0.92390	3.16380	1.45120	K562	XRCC6
KCNE3	ENSG00000175538.6	695.92370	411.99260	0.75620	7.89950	6.31610	K562	ZC3H8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for KCNE3 is not available on ENCORE database.

1 RBPs can affect the splicing of KCNE3 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
SE	KCNE3	ENSG00000175538.6	chr11	-	74172999	74173148			74165885	74168648	74178442	74178673	-0.22200	0.00045	0.00881	excluded	K562	PUS1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

KCNE3

General Information

Functions

Localization

Domains (AlphaFold: KCNE3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for KCNE3 is not avaliable on ENCORE database.

1 proteins are bound to KCNE3 RNA:

eCLIP assay for KCNE3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for KCNE3 is not available on ENCORE database.

104 RBPs can affect the gene expression of KCNE3 :

The Knockdown/knockout RNA-Seq assay for KCNE3 is not available on ENCORE database.

1 RBPs can affect the splicing of KCNE3 :

The Knockdown/knockout RNA-Seq assay for KCNE3 is not avaliable on ENCORE database.