FXYD1

General Information

Gene Name : FXYD1
Gene ID : ENSG00000266964.5
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: FXYD1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	FXYD1	ENSG00000266964.5	0.00	0.23	0.12	ENCSR000AEF
HepG2	FXYD1	ENSG00000266964.5	6.48	3.16	4.82	ENCSR985KAT
K562	FXYD1	ENSG00000266964.5	1.55	0.48	1.02	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for FXYD1 is not avaliable on ENCORE database.

Proteins bound to RNA

FXYD1 RNA is bound by 7 proteins.

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eCLIP assay for FXYD1 is not avaliable on ENCORE database.

7 proteins are bound to FXYD1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr19	35633706	35633822	+	3'-UTR,intron-Proximal	5.01081	28.70461	HepG2	AQR
chr19	35632258	35632390	+	CDS,intron-Distal,intron-Proximal	6.55560	20.89654	HepG2	DDX59
chr19	35633703	35633778	+	3'-UTR,intron-Proximal	3.50099	4.59965	HepG2	PRPF4
chr19	35633828	35633881	+	3'-UTR	3.68977	4.37595	HepG2	LARP4
chr19	35629931	35629989	+	intron-Distal	4.12626	4.10323	HepG2	PRPF4
chr19	35633675	35633700	+	3'-UTR,intron-Proximal	3.67131	3.96535	HepG2	AQR
chr19	35631653	35631754	+	intron-Distal	4.32232	3.74583	HepG2	PTBP1
chr19	35633375	35633407	+	CDS,intron-Proximal	3.47052	3.41665	HepG2	GRWD1
chr19	35633622	35633668	+	3'-UTR,CDS,intron-Proximal	3.57367	3.05161	HepG2	PPIG
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 9 of 9 entries

eCLIP assay for FXYD1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for FXYD1 is not available on ENCORE database.
99 RBPs can affect the levels of FXYD1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for FXYD1 is not available on ENCORE database.

99 RBPs can affect the gene expression of FXYD1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
FXYD1	ENSG00000266964.1	4.57740	443.44110	-6.59810	113.19060	111.25420	HepG2	SRSF1
FXYD1	ENSG00000266964.1	49.68070	401.02550	-3.01290	56.20310	54.11860	HepG2	PCBP1
FXYD1	ENSG00000266964.1	25.17560	408.08700	-4.01880	55.20710	53.45400	HepG2	PTBP1
FXYD1	ENSG00000266964.1	633.49540	157.43100	2.00850	54.08700	51.68380	HepG2	DAZAP1
FXYD1	ENSG00000266964.1	89.55580	424.82010	-2.24600	37.28370	35.57740	HepG2	SF3B4
FXYD1	ENSG00000266964.1	624.97680	148.77790	2.07050	37.52320	34.99840	HepG2	EIF4G2
FXYD1	ENSG00000266964.1	101.69340	454.13790	-2.15890	36.18140	34.70110	HepG2	NELFE
FXYD1	ENSG00000266964.1	4.92400	146.40800	-4.89400	33.41920	31.68730	HepG2	CELF1
FXYD1	ENSG00000266964.1	506.26560	142.87970	1.82500	31.36630	29.52250	HepG2	SLBP
FXYD1	ENSG00000266964.1	16.44360	174.97800	-3.41160	27.88990	26.58600	HepG2	RBM22
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 99 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for FXYD1 is not available on ENCORE database.

7 RBPs can affect the splicing of FXYD1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
RI	FXYD1	ENSG00000266964.1	chr19	+	35632035	35632476	35632035	35632110	35632439	35632476	0.60700	0.00000	0.00000	included	HepG2	U2AF2
RI	FXYD1	ENSG00000266964.1	chr19	+	35632035	35632476	35632035	35632110	35632439	35632476	0.29900	0.00000	0.00000	included	HepG2	U2AF1
A3SS	FXYD1	ENSG00000266964.1	chr19	+	35632035	35632110	35632052	35632110	35631500	35631533	0.09400	0.00008	0.03579	longer	HepG2	HNRNPUL1
A3SS	FXYD1	ENSG00000266964.1	chr19	+	35632035	35632110	35632052	35632110	35631500	35631533	0.09000	0.00019	0.00679	longer	HepG2	U2AF2
RI	FXYD1	ENSG00000266964.1	chr19	+	35633623	35633954	35633623	35633675	35633820	35633954	-0.05700	0.00054	0.03683	excluded	HepG2	TBRG4
RI	FXYD1	ENSG00000266964.1	chr19	+	35632035	35632476	35632035	35632110	35632439	35632476	-0.14200	0.00077	0.04178	excluded	HepG2	LARP4
SE	FXYD1	ENSG00000266964.1	chr19	+	35630979	35631040	35629711	35629798	35631500	35631533	-0.08400	0.00100	0.05654	excluded	HepG2	NCBP2
RI	FXYD1	ENSG00000266964.1	chr19	+	35633623	35633954	35633623	35633675	35633820	35633954	-0.17700	0.00576	0.08909	excluded	HepG2	KHSRP

Showing 1 to 8 of 8 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

FXYD1

General Information

Functions

Localization

Domains (AlphaFold: FXYD1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for FXYD1 is not avaliable on ENCORE database.

7 proteins are bound to FXYD1 RNA:

eCLIP assay for FXYD1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for FXYD1 is not available on ENCORE database.

99 RBPs can affect the gene expression of FXYD1 :

The Knockdown/knockout RNA-Seq assay for FXYD1 is not available on ENCORE database.

7 RBPs can affect the splicing of FXYD1 :

The Knockdown/knockout RNA-Seq assay for FXYD1 is not avaliable on ENCORE database.